EnhancerDB
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  3. vista3533[chr1:158788454-158788632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3533[chr1:158788454-158788632]
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Tissue distribution of vista3533
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Transcription factor that possibly regulate vista3533[chr1:158788454-158788632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 158788446 158788462 SOX8 JASPAR yes 32475220
chr1 158788446 158788462 SOX8 JASPAR yes 118381220
chr1 158788488 158788500 GRHL1 JASPAR yes 32475221
chr1 158788488 158788500 GRHL1 JASPAR yes 118381221
chr1 158788490 158788500 MSC JASPAR yes 32475222
chr1 158788490 158788500 MSC JASPAR yes 118381222
chr1 158788503 158788507 YY1 TRANSFAC yes 32475223
chr1 158788503 158788507 YY1 TRANSFAC yes 118381223
chr1 158788504 158788512 FEV JASPAR yes 32475224
chr1 158788504 158788512 FEV JASPAR yes 118381224
chr1 158788504 158788518 GATA2 JASPAR yes 32475225
chr1 158788504 158788518 GATA2 JASPAR yes 118381225
chr1 158788506 158788511 ETS2 TRANSFAC yes 32475226
chr1 158788506 158788511 ETS2 TRANSFAC yes 118381226
chr1 158788508 158788516 GATA5 JASPAR yes 32475227
chr1 158788508 158788516 GATA5 JASPAR yes 118381227
chr1 158788512 158788527 LEF1 JASPAR yes 32475228
chr1 158788512 158788527 LEF1 JASPAR yes 118381228
chr1 158788529 158788534 MYC TRANSFAC yes 32475229
chr1 158788529 158788534 MYC TRANSFAC yes 118381229
chr1 158788536 158788541 MYB TRANSFAC yes 32475230
chr1 158788536 158788541 MYB TRANSFAC yes 118381230
chr1 158788547 158788551 NFE TRANSFAC yes 32475231
chr1 158788547 158788551 NFE TRANSFAC yes 118381231
chr1 158788548 158788553 GATA2 JASPAR yes 32475232
chr1 158788548 158788553 GATA2 JASPAR yes 118381232
chr1 158788567 158788588 ZNF263 JASPAR yes 32475233
chr1 158788567 158788588 ZNF263 JASPAR yes 118381233
chr1 158788569 158788590 IRF1 JASPAR yes 32475234
chr1 158788569 158788590 IRF1 JASPAR yes 118381234
chr1 158788571 158788582 FLI1 JASPAR yes 32475235
chr1 158788571 158788582 FLI1 JASPAR yes 118381235
chr1 158788571 158788586 STAT2 JASPAR yes 32475236
chr1 158788571 158788586 STAT2 JASPAR yes 118381236
chr1 158788572 158788583 ELF5 JASPAR yes 32475237
chr1 158788572 158788583 ELF5 JASPAR yes 118381237
chr1 158788572 158788585 ELF1 JASPAR yes 32475238
chr1 158788572 158788585 ELF1 JASPAR yes 118381238
chr1 158788572 158788586 SPI1 JASPAR yes 32475239
chr1 158788572 158788586 SPIC JASPAR yes 32475240
chr1 158788572 158788586 SPI1 JASPAR yes 118381239
chr1 158788572 158788586 SPIC JASPAR yes 118381240
chr1 158788575 158788582 SPIB JASPAR yes 32475241
chr1 158788575 158788582 SPIB JASPAR yes 118381241
SNP sites on vista3533[chr1:158788454-158788632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 158788542 rs2875712 A G no 659735
chr1 158788558 rs115235714 C A no 659736
Genes possibly regulated by vista3533[chr1:158788454-158788632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 158724510 158725681 + OR6K6 ENSG00000180433.4 158724510 1.0 0.0 1414 36056
chr1 158735466 158736492 - OR6N1 ENSG00000197403.2 158736492 1.0 0.0 1415 48038
chr1 158746472 158747425 - OR6N2 ENSG00000188340.1 158747425 0.0 1.0 1416 58971
chr1 158801107 158819296 + MNDA ENSG00000163563.7 158801107 0.96 1.0 1417 87525
Expression level of Genes
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miRNAs possibly regulated by vista3533[chr1:158788454-158788632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results