EnhancerDB
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  3. vista35330[chr2:237481215-237481391]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35330[chr2:237481215-237481391]
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Tissue distribution of vista35330
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Transcription factor that possibly regulate vista35330[chr2:237481215-237481391]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 237481215 237481227 TFAP2A JASPAR yes 22237743
chr2 237481215 237481227 TFAP2B JASPAR yes 22237744
chr2 237481215 237481227 TFAP2C JASPAR yes 22237745
chr2 237481215 237481227 TFAP2A JASPAR yes 82032633
chr2 237481215 237481227 TFAP2B JASPAR yes 82032634
chr2 237481215 237481227 TFAP2C JASPAR yes 82032635
chr2 237481221 237481227 SP1 TRANSFAC yes 22237746
chr2 237481221 237481227 SP1 TRANSFAC yes 82032636
chr2 237481222 237481227 SP1 TRANSFAC yes 22237747
chr2 237481222 237481227 SP1 TRANSFAC yes 82032637
chr2 237481223 237481228 SP1 TRANSFAC yes 22237748
chr2 237481223 237481228 SP1 TRANSFAC yes 82032638
chr2 237481223 237481229 SP1 TRANSFAC yes 22237749
chr2 237481223 237481229 SP1 TRANSFAC yes 82032639
chr2 237481242 237481261 PAX5 JASPAR yes 22237750
chr2 237481242 237481261 PAX5 JASPAR yes 82032640
chr2 237481245 237481260 ESR2 JASPAR yes 22237751
chr2 237481245 237481260 ESR2 JASPAR yes 82032641
chr2 237481255 237481269 GLIS3 JASPAR yes 22237752
chr2 237481255 237481269 ZIC1 JASPAR yes 22237753
chr2 237481255 237481269 GLIS3 JASPAR yes 82032642
chr2 237481255 237481269 ZIC1 JASPAR yes 82032643
chr2 237481255 237481270 ZIC3 JASPAR yes 22237754
chr2 237481255 237481270 ZIC4 JASPAR yes 22237755
chr2 237481255 237481270 ZIC3 JASPAR yes 82032644
chr2 237481255 237481270 ZIC4 JASPAR yes 82032645
chr2 237481265 237481284 REST JASPAR yes 22237756
chr2 237481265 237481284 REST JASPAR yes 82032646
chr2 237481288 237481293 SP1 TRANSFAC yes 22237757
chr2 237481288 237481293 SP1 TRANSFAC yes 82032647
chr2 237481335 237481341 SOX10 JASPAR yes 22237758
chr2 237481335 237481341 SOX10 JASPAR yes 82032648
chr2 237481337 237481351 CREB3L1 JASPAR yes 22237759
chr2 237481337 237481351 CREB3L1 JASPAR yes 82032649
chr2 237481338 237481352 XBP1 JASPAR yes 22237760
chr2 237481338 237481352 XBP1 JASPAR yes 82032650
chr2 237481340 237481345 ATF1 TRANSFAC yes 22237761
chr2 237481340 237481345 ATF1 TRANSFAC yes 82032651
chr2 237481348 237481368 TP53 JASPAR yes 22237762
chr2 237481348 237481368 TP53 JASPAR yes 82032652
chr2 237481378 237481384 TCF4 TRANSFAC yes 22237763
chr2 237481378 237481384 TCF4 TRANSFAC yes 82032653
chr2 237481385 237481398 TFAP2A JASPAR yes 22237764
chr2 237481385 237481398 TFAP2B JASPAR yes 22237765
chr2 237481385 237481398 TFAP2C JASPAR yes 22237766
chr2 237481385 237481398 TFAP2A JASPAR yes 82032654
chr2 237481385 237481398 TFAP2B JASPAR yes 82032655
chr2 237481385 237481398 TFAP2C JASPAR yes 82032656
chr2 237481388 237481392 NFE TRANSFAC yes 22237767
chr2 237481388 237481392 NFE TRANSFAC yes 82032657
SNP sites on vista35330[chr2:237481215-237481391]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 237481226 rs534116974 C G,T
SP1 TFAP2A TFAP2B TFAP2C
6470706
chr2 237481344 rs117896801 C T
ATF1 CREB3L1 XBP1
6470707
chr2 237481345 rs147511794 G A
ATF1 CREB3L1 XBP1
6470708
Genes possibly regulated by vista35330[chr2:237481215-237481391]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 237232794 237416185 - IQCA1 ENSG00000132321.12 237416185 0.94 1.0 3282 34970
chr2 237476430 237491001 + ACKR3 ENSG00000144476.5 237476430 0.76 0.99 3283 95215
Expression level of Genes
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miRNAs possibly regulated by vista35330[chr2:237481215-237481391]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results