EnhancerDB
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  3. vista35372[chr2:238053401-238053581]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35372[chr2:238053401-238053581]
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Tissue distribution of vista35372
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Transcription factor that possibly regulate vista35372[chr2:238053401-238053581]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238053422 238053428 MYC TRANSFAC yes 22239893
chr2 238053422 238053428 MYC TRANSFAC yes 82084572
chr2 238053424 238053432 GATA3 JASPAR yes 22239894
chr2 238053424 238053432 GATA5 JASPAR yes 22239895
chr2 238053424 238053432 GATA3 JASPAR yes 82084573
chr2 238053424 238053432 GATA5 JASPAR yes 82084574
chr2 238053442 238053454 FOXI1 JASPAR yes 22239896
chr2 238053442 238053454 FOXI1 JASPAR yes 82084575
chr2 238053473 238053494 ZNF263 JASPAR yes 22239897
chr2 238053473 238053494 ZNF263 JASPAR yes 82084576
chr2 238053476 238053487 E2F6 JASPAR yes 22239898
chr2 238053476 238053487 E2F6 JASPAR yes 82084577
chr2 238053476 238053497 ZNF263 JASPAR yes 22239899
chr2 238053476 238053497 ZNF263 JASPAR yes 82084578
chr2 238053492 238053495 MYB TRANSFAC yes 22239900
chr2 238053492 238053495 MYB TRANSFAC yes 82084579
chr2 238053505 238053524 RFX2 JASPAR yes 22239901
chr2 238053505 238053524 RFX2 JASPAR yes 82084580
chr2 238053528 238053531 MYB TRANSFAC yes 22239902
chr2 238053528 238053531 MYB TRANSFAC yes 82084581
chr2 238053528 238053539 DUX4 JASPAR yes 22239903
chr2 238053528 238053539 DUX4 JASPAR yes 82084582
chr2 238053538 238053559 IRF1 JASPAR yes 22239904
chr2 238053538 238053559 IRF1 JASPAR yes 82084583
chr2 238053540 238053555 PRDM1 JASPAR yes 22239905
chr2 238053540 238053555 PRDM1 JASPAR yes 82084584
chr2 238053552 238053556 H1TF2 TRANSFAC yes 22239906
chr2 238053552 238053556 NFE TRANSFAC yes 22239907
chr2 238053552 238053556 SRF TRANSFAC yes 22239908
chr2 238053552 238053556 H1TF2 TRANSFAC yes 82084585
chr2 238053552 238053556 NFE TRANSFAC yes 82084586
chr2 238053552 238053556 SRF TRANSFAC yes 82084587
chr2 238053552 238053558 NFYC TRANSFAC yes 22239909
chr2 238053552 238053558 NFYC TRANSFAC yes 82084588
chr2 238053561 238053582 ZNF263 JASPAR yes 22239910
chr2 238053561 238053582 ZNF263 JASPAR yes 82084589
chr2 238053572 238053593 IRF1 JASPAR yes 22239911
chr2 238053572 238053593 IRF1 JASPAR yes 82084590
chr2 238053574 238053579 MYB TRANSFAC yes 22239912
chr2 238053574 238053579 MYB TRANSFAC yes 82084591
SNP sites on vista35372[chr2:238053401-238053581]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238053413 rs77085530 G A no 6476813
chr2 238053449 rs561361841 A G
FOXI1
6476814
chr2 238053463 rs530315109 C G no 6476815
chr2 238053498 rs78722630 G A no 6476816
Genes possibly regulated by vista35372[chr2:238053401-238053581]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 237993955 238009109 + COPS8 ENSG00000198612.6 237993955 0.7 0.98 3284 40554
Expression level of Genes
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miRNAs possibly regulated by vista35372[chr2:238053401-238053581]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.11939793481441281 0.890444 0.0 1023
Expression level of miRNAs
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