EnhancerDB
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  3. vista35376[chr2:238080117-238080402]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35376[chr2:238080117-238080402]
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Tissue distribution of vista35376
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Transcription factor that possibly regulate vista35376[chr2:238080117-238080402]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238080032 238080472 CTCF UCSC Txn Factor no Conserved 108435889
chr2 238080102 238080396 RAD21 UCSC Txn Factor no Conserved 108435890
chr2 238080192 238080496 CEBPB UCSC Txn Factor no Conserved 108435891
chr2 238080222 238080349 SMC3 UCSC Txn Factor no Conserved 108435892
chr2 238080128 238080138 GABPA JASPAR yes 22240089
chr2 238080128 238080138 GABPA JASPAR yes 82088146
chr2 238080128 238080141 ELF1 JASPAR yes 22240090
chr2 238080128 238080141 ELF1 JASPAR yes 82088147
chr2 238080135 238080146 NFKB1 JASPAR yes 22240091
chr2 238080135 238080146 NFKB1 JASPAR yes 82088148
chr2 238080140 238080151 E2F6 JASPAR yes 22240092
chr2 238080140 238080151 E2F6 JASPAR yes 82088149
chr2 238080162 238080180 ESR2 JASPAR yes 22240093
chr2 238080162 238080180 ESR2 JASPAR yes 82088150
chr2 238080193 238080199 SOX10 JASPAR yes 22240094
chr2 238080193 238080199 SOX10 JASPAR yes 82088151
chr2 238080201 238080212 HOXC11 JASPAR yes 22240095
chr2 238080201 238080212 HOXC12 JASPAR yes 22240096
chr2 238080201 238080212 HOXC11 JASPAR yes 82088152
chr2 238080201 238080212 HOXC12 JASPAR yes 82088153
chr2 238080202 238080212 HOXD11 JASPAR yes 22240097
chr2 238080202 238080212 HOXD11 JASPAR yes 82088154
chr2 238080219 238080222 MYB TRANSFAC yes 22240098
chr2 238080219 238080222 MYB TRANSFAC yes 82088155
chr2 238080226 238080231 GATA2 JASPAR yes 22240099
chr2 238080226 238080231 GATA2 JASPAR yes 82088156
chr2 238080234 238080249 JUND JASPAR yes 22240100
chr2 238080234 238080249 JUND JASPAR yes 82088157
chr2 238080245 238080264 CTCF JASPAR yes 22240101
chr2 238080245 238080264 CTCF JASPAR yes 82088158
chr2 238080248 238080260 TAL1 JASPAR yes 22240102
chr2 238080248 238080260 TAL1 JASPAR yes 82088159
chr2 238080250 238080260 OLIG1 JASPAR yes 22240103
chr2 238080250 238080260 OLIG3 JASPAR yes 22240104
chr2 238080250 238080260 OLIG1 JASPAR yes 82088160
chr2 238080250 238080260 OLIG3 JASPAR yes 82088161
chr2 238080250 238080262 TAL1 JASPAR yes 22240105
chr2 238080250 238080262 TAL1 JASPAR yes 82088162
chr2 238080254 238080269 JUND JASPAR yes 22240106
chr2 238080254 238080269 JUND JASPAR yes 82088163
chr2 238080262 238080266 YY1 TRANSFAC yes 22240107
chr2 238080262 238080266 YY1 TRANSFAC yes 82088164
chr2 238080264 238080278 TCF7L2 JASPAR yes 22240108
chr2 238080264 238080278 TCF7L2 JASPAR yes 82088165
chr2 238080264 238080279 LEF1 JASPAR yes 22240109
chr2 238080264 238080279 LEF1 JASPAR yes 82088166
chr2 238080283 238080286 MYB TRANSFAC yes 22240110
chr2 238080283 238080286 MYB TRANSFAC yes 82088167
chr2 238080297 238080302 H4TF1 TRANSFAC yes 22240111
chr2 238080297 238080302 H4TF1 TRANSFAC yes 82088168
chr2 238080324 238080330 SOX10 JASPAR yes 22240112
chr2 238080324 238080330 SOX10 JASPAR yes 82088169
chr2 238080334 238080345 CEBPA JASPAR yes 22240113
chr2 238080334 238080345 CEBPA JASPAR yes 82088170
chr2 238080335 238080345 CEBPB JASPAR yes 22240114
chr2 238080335 238080345 CEBPD JASPAR yes 22240115
chr2 238080335 238080345 CEBPE JASPAR yes 22240116
chr2 238080335 238080345 CEBPG JASPAR yes 22240117
chr2 238080335 238080345 CEBPB JASPAR yes 82088171
chr2 238080335 238080345 CEBPD JASPAR yes 82088172
chr2 238080335 238080345 CEBPE JASPAR yes 82088173
chr2 238080335 238080345 CEBPG JASPAR yes 82088174
chr2 238080335 238080346 CEBPB JASPAR yes 22240118
chr2 238080335 238080346 CEBPB JASPAR yes 82088175
chr2 238080358 238080369 FOXP2 JASPAR yes 22240119
chr2 238080358 238080369 FOXP2 JASPAR yes 82088176
chr2 238080362 238080378 SOX4 JASPAR yes 22240120
chr2 238080362 238080378 SOX4 JASPAR yes 82088177
chr2 238080397 238080402 GATA2 JASPAR yes 22240121
chr2 238080397 238080402 GATA2 JASPAR yes 82088178
SNP sites on vista35376[chr2:238080117-238080402]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238080214 rs4621125 G A
CEBPB CTCF RAD21
6477191
chr2 238080402 rs28500614 A G
CEBPB CTCF GATA2
6477192
Genes possibly regulated by vista35376[chr2:238080117-238080402]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 237993955 238009109 + COPS8 ENSG00000198612.6 237993955 0.7 0.98 3284 13838
chr2 238165734 238166319 + AC112715.2 ENSG00000224132.2 238165734 0.87 1.0 3285 14668
Expression level of Genes
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miRNAs possibly regulated by vista35376[chr2:238080117-238080402]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.13084867213041337 0.890444 0.0 1023
Expression level of miRNAs
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