EnhancerDB
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  3. vista35379[chr2:238105646-238105797]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35379[chr2:238105646-238105797]
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Tissue distribution of vista35379
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Transcription factor that possibly regulate vista35379[chr2:238105646-238105797]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238105633 238105653 TP53 JASPAR yes 22240194
chr2 238105633 238105653 TP53 JASPAR yes 82091218
chr2 238105638 238105656 SRF JASPAR yes 22240195
chr2 238105638 238105656 SRF JASPAR yes 82091219
chr2 238105648 238105663 TFAP2A JASPAR yes 22240196
chr2 238105648 238105663 TFAP2C JASPAR yes 22240197
chr2 238105648 238105663 TFAP2A JASPAR yes 82091220
chr2 238105648 238105663 TFAP2C JASPAR yes 82091221
chr2 238105650 238105664 EBF1 JASPAR yes 22240198
chr2 238105650 238105664 EBF1 JASPAR yes 82091222
chr2 238105650 238105665 TFAP2A JASPAR yes 22240199
chr2 238105650 238105665 TFAP2A JASPAR yes 82091223
chr2 238105651 238105662 EBF1 JASPAR yes 22240200
chr2 238105651 238105662 EBF1 JASPAR yes 82091224
chr2 238105652 238105661 TFAP2A JASPAR yes 22240201
chr2 238105652 238105661 TFAP2A JASPAR yes 82091225
chr2 238105658 238105663 ETS2 TRANSFAC yes 22240202
chr2 238105658 238105663 ETS2 TRANSFAC yes 82091226
chr2 238105691 238105705 JUN JASPAR yes 22240203
chr2 238105691 238105705 JUN JASPAR yes 82091227
chr2 238105695 238105706 FOS JASPAR yes 22240204
chr2 238105695 238105706 FOSL1 JASPAR yes 22240205
chr2 238105695 238105706 JUND JASPAR yes 22240206
chr2 238105695 238105706 FOS JASPAR yes 82091228
chr2 238105695 238105706 FOSL1 JASPAR yes 82091229
chr2 238105695 238105706 JUND JASPAR yes 82091230
chr2 238105696 238105710 JUN JASPAR yes 22240207
chr2 238105696 238105710 JUN JASPAR yes 82091231
chr2 238105696 238105712 POU4F2 JASPAR yes 22240208
chr2 238105696 238105712 POU4F3 JASPAR yes 22240209
chr2 238105696 238105712 POU4F2 JASPAR yes 82091232
chr2 238105696 238105712 POU4F3 JASPAR yes 82091233
chr2 238105697 238105708 BATF JASPAR yes 22240210
chr2 238105697 238105708 BATF JASPAR yes 82091234
chr2 238105698 238105712 POU4F1 JASPAR yes 22240211
chr2 238105698 238105712 POU4F1 JASPAR yes 82091235
chr2 238105702 238105706 YY1 TRANSFAC yes 22240212
chr2 238105702 238105706 YY1 TRANSFAC yes 82091236
chr2 238105734 238105745 NRL JASPAR yes 22240213
chr2 238105734 238105745 NRL JASPAR yes 82091237
chr2 238105743 238105753 SP1 JASPAR yes 22240214
chr2 238105743 238105753 SP1 JASPAR yes 82091238
chr2 238105744 238105754 SP1 JASPAR yes 22240215
chr2 238105744 238105754 SP1 JASPAR yes 82091239
chr2 238105770 238105774 NFE TRANSFAC yes 22240216
chr2 238105770 238105774 NFE TRANSFAC yes 82091240
chr2 238105771 238105776 GATA2 JASPAR yes 22240217
chr2 238105771 238105776 GATA2 JASPAR yes 82091241
chr2 238105796 238105805 SNAI2 JASPAR yes 22240218
chr2 238105796 238105805 SNAI2 JASPAR yes 82091242
chr2 238105796 238105806 TCF3 JASPAR yes 22240219
chr2 238105796 238105806 TCF4 JASPAR yes 22240220
chr2 238105796 238105806 TCF3 JASPAR yes 82091243
chr2 238105796 238105806 TCF4 JASPAR yes 82091244
SNP sites on vista35379[chr2:238105646-238105797]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238105673 rs72014029 CAA C no 6477512
chr2 238105673 rs796362533 CAA C no 6477513
chr2 238105703 rs188490135 C G
BATF FOS FOSL1 JUN JUND POU4F1 POU4F2 POU4F3 YY1
6477514
chr2 238105775 rs145392547 C G
GATA2
6477515
Genes possibly regulated by vista35379[chr2:238105646-238105797]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238165734 238166319 + AC112715.2 ENSG00000224132.2 238165734 0.87 1.0 3285 40063
Expression level of Genes
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miRNAs possibly regulated by vista35379[chr2:238105646-238105797]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.14398355217119618 0.890444 0.0 1023
Expression level of miRNAs
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