EnhancerDB
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  3. vista35380[chr2:238116338-238116655]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35380[chr2:238116338-238116655]
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Tissue distribution of vista35380
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Transcription factor that possibly regulate vista35380[chr2:238116338-238116655]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238116320 238116688 CEBPB UCSC Txn Factor no Conserved 108435895
chr2 238116364 238116374 HOXA13 JASPAR yes 22240221
chr2 238116364 238116374 HOXA13 JASPAR yes 82092758
chr2 238116370 238116388 RARA JASPAR yes 22240222
chr2 238116370 238116388 RARA JASPAR yes 82092759
chr2 238116380 238116389 SOX9 JASPAR yes 22240223
chr2 238116380 238116389 SOX9 JASPAR yes 82092760
chr2 238116385 238116397 PBX1 JASPAR yes 22240224
chr2 238116385 238116397 PBX1 JASPAR yes 82092761
chr2 238116398 238116405 SPIB JASPAR yes 22240225
chr2 238116398 238116405 SPIB JASPAR yes 82092762
chr2 238116416 238116425 NKX2-8 JASPAR yes 22240226
chr2 238116416 238116425 NKX2-8 JASPAR yes 82092763
chr2 238116416 238116426 NKX2-3 JASPAR yes 22240227
chr2 238116416 238116426 NKX2-3 JASPAR yes 82092764
chr2 238116423 238116429 PEA3 TRANSFAC yes 22240228
chr2 238116423 238116429 PEA3 TRANSFAC yes 82092765
chr2 238116433 238116444 CEBPA JASPAR yes 22240229
chr2 238116433 238116444 CEBPA JASPAR yes 82092766
chr2 238116434 238116444 CEBPB JASPAR yes 22240230
chr2 238116434 238116444 CEBPD JASPAR yes 22240231
chr2 238116434 238116444 CEBPE JASPAR yes 22240232
chr2 238116434 238116444 CEBPG JASPAR yes 22240233
chr2 238116434 238116444 CEBPB JASPAR yes 82092767
chr2 238116434 238116444 CEBPD JASPAR yes 82092768
chr2 238116434 238116444 CEBPE JASPAR yes 82092769
chr2 238116434 238116444 CEBPG JASPAR yes 82092770
chr2 238116442 238116460 ESR1 JASPAR yes 22240234
chr2 238116442 238116460 ESR1 JASPAR yes 82092771
chr2 238116443 238116453 SP1 JASPAR yes 22240235
chr2 238116443 238116453 SP1 JASPAR yes 82092772
chr2 238116444 238116448 LFA1 TRANSFAC yes 22240236
chr2 238116444 238116448 LFA1 TRANSFAC yes 82092773
chr2 238116450 238116454 ESR1 TRANSFAC yes 22240237
chr2 238116450 238116454 ESR1 TRANSFAC yes 82092774
chr2 238116456 238116462 NFIC JASPAR yes 22240238
chr2 238116456 238116462 NFIC JASPAR yes 82092775
chr2 238116460 238116476 SOX4 JASPAR yes 22240239
chr2 238116460 238116476 SOX4 JASPAR yes 82092776
chr2 238116461 238116476 SOX21 JASPAR yes 22240240
chr2 238116461 238116476 SOX21 JASPAR yes 82092777
chr2 238116471 238116475 NFE TRANSFAC yes 22240241
chr2 238116471 238116475 NFE TRANSFAC yes 82092778
chr2 238116476 238116485 VENTX JASPAR yes 22240242
chr2 238116476 238116485 VENTX JASPAR yes 82092779
chr2 238116476 238116486 BARHL2 JASPAR yes 22240243
chr2 238116476 238116486 BARHL2 JASPAR yes 82092780
chr2 238116522 238116543 REST JASPAR yes 22240244
chr2 238116522 238116543 REST JASPAR yes 82092781
chr2 238116529 238116539 NEUROD2 JASPAR yes 22240245
chr2 238116529 238116539 NEUROD2 JASPAR yes 82092782
chr2 238116529 238116540 USF1 JASPAR yes 22240246
chr2 238116529 238116540 USF2 JASPAR yes 22240247
chr2 238116529 238116540 USF1 JASPAR yes 82092783
chr2 238116529 238116540 USF2 JASPAR yes 82092784
chr2 238116530 238116540 MAX JASPAR yes 22240248
chr2 238116530 238116540 MAX JASPAR yes 82092785
chr2 238116534 238116552 ESR1 JASPAR yes 22240249
chr2 238116534 238116552 ESR1 JASPAR yes 82092786
chr2 238116562 238116570 GATA3 JASPAR yes 22240250
chr2 238116562 238116570 GATA3 JASPAR yes 82092787
chr2 238116589 238116610 IRF1 JASPAR yes 22240251
chr2 238116589 238116610 IRF1 JASPAR yes 82092788
chr2 238116592 238116606 IRF8 JASPAR yes 22240252
chr2 238116592 238116606 IRF8 JASPAR yes 82092789
chr2 238116594 238116605 CEBPA JASPAR yes 22240253
chr2 238116594 238116605 CEBPA JASPAR yes 82092790
chr2 238116595 238116606 CEBPB JASPAR yes 22240254
chr2 238116595 238116606 CEBPB JASPAR yes 82092791
chr2 238116612 238116616 TEAD2 TRANSFAC yes 22240255
chr2 238116612 238116616 TEAD2 TRANSFAC yes 82092792
chr2 238116612 238116617 TBP TRANSFAC yes 22240256
chr2 238116612 238116617 TBP TRANSFAC yes 82092793
chr2 238116624 238116633 PITX3 JASPAR yes 22240257
chr2 238116624 238116633 PITX3 JASPAR yes 82092794
chr2 238116624 238116634 GSC JASPAR yes 22240258
chr2 238116624 238116634 GSC JASPAR yes 82092795
chr2 238116625 238116633 RHOXF1 JASPAR yes 22240259
chr2 238116625 238116633 RHOXF1 JASPAR yes 82092796
SNP sites on vista35380[chr2:238116338-238116655]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238116342 rs12472168 C T
CEBPB
6477652
chr2 238116549 rs114932415 C T
CEBPB ESR1
6477653
chr2 238116588 rs6750665 G A
CEBPB
6477654
Genes possibly regulated by vista35380[chr2:238116338-238116655]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238165734 238166319 + AC112715.2 ENSG00000224132.2 238165734 0.87 1.0 3285 50921
Expression level of Genes
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miRNAs possibly regulated by vista35380[chr2:238116338-238116655]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.15037128075907202 0.890444 0.0 1023
Expression level of miRNAs
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