EnhancerDB
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  3. vista35396[chr2:238223884-238224369]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35396[chr2:238223884-238224369]
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Tissue distribution of vista35396
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Transcription factor that possibly regulate vista35396[chr2:238223884-238224369]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238223703 238224133 CTCF UCSC Txn Factor no Conserved 107690849
chr2 238223703 238224133 CTCF UCSC Txn Factor no Conserved 108435904
chr2 238223978 238224179 SRF UCSC Txn Factor no Conserved 107690850
chr2 238223978 238224179 SRF UCSC Txn Factor no Conserved 108435905
chr2 238224000 238224198 USF1 UCSC Txn Factor no Conserved 107690851
chr2 238224000 238224198 USF1 UCSC Txn Factor no Conserved 108435906
chr2 238223914 238223925 E2F1 JASPAR yes 22240891
chr2 238223914 238223925 E2F1 JASPAR yes 68302791
chr2 238223914 238223925 E2F1 JASPAR yes 82104327
chr2 238223942 238223957 MEF2A JASPAR yes 22240892
chr2 238223942 238223957 MEF2A JASPAR yes 68302792
chr2 238223942 238223957 MEF2A JASPAR yes 82104328
chr2 238223942 238223961 REST JASPAR yes 22240893
chr2 238223942 238223961 REST JASPAR yes 68302793
chr2 238223942 238223961 REST JASPAR yes 82104329
chr2 238223943 238223958 MEF2C JASPAR yes 22240894
chr2 238223943 238223958 MEF2C JASPAR yes 68302794
chr2 238223943 238223958 MEF2C JASPAR yes 82104330
chr2 238223944 238223956 MEF2A JASPAR yes 22240895
chr2 238223944 238223956 MEF2B JASPAR yes 22240896
chr2 238223944 238223956 MEF2D JASPAR yes 22240897
chr2 238223944 238223956 MEF2A JASPAR yes 68302795
chr2 238223944 238223956 MEF2B JASPAR yes 68302796
chr2 238223944 238223956 MEF2D JASPAR yes 68302797
chr2 238223944 238223956 MEF2A JASPAR yes 82104331
chr2 238223944 238223956 MEF2B JASPAR yes 82104332
chr2 238223944 238223956 MEF2D JASPAR yes 82104333
chr2 238223945 238223955 MEF2A JASPAR yes 22240898
chr2 238223945 238223955 MEF2A JASPAR yes 68302798
chr2 238223945 238223955 MEF2A JASPAR yes 82104334
chr2 238223946 238223950 YY1 TRANSFAC yes 22240899
chr2 238223946 238223950 YY1 TRANSFAC yes 68302799
chr2 238223946 238223950 YY1 TRANSFAC yes 82104335
chr2 238223981 238223985 NFE TRANSFAC yes 22240900
chr2 238223981 238223985 NFE TRANSFAC yes 68302800
chr2 238223981 238223985 NFE TRANSFAC yes 82104336
chr2 238224021 238224033 TEAD1 JASPAR yes 22240901
chr2 238224021 238224033 TEAD1 JASPAR yes 68302801
chr2 238224021 238224033 TEAD1 JASPAR yes 82104337
chr2 238224023 238224033 TEAD1 JASPAR yes 22240902
chr2 238224023 238224033 TEAD4 JASPAR yes 22240903
chr2 238224023 238224033 TEAD1 JASPAR yes 68302802
chr2 238224023 238224033 TEAD4 JASPAR yes 68302803
chr2 238224023 238224033 TEAD1 JASPAR yes 82104338
chr2 238224023 238224033 TEAD4 JASPAR yes 82104339
chr2 238224024 238224032 TEAD3 JASPAR yes 22240904
chr2 238224024 238224032 TEAD3 JASPAR yes 68302804
chr2 238224024 238224032 TEAD3 JASPAR yes 82104340
chr2 238224035 238224056 REST JASPAR yes 22240905
chr2 238224035 238224056 REST JASPAR yes 68302805
chr2 238224035 238224056 REST JASPAR yes 82104341
chr2 238224036 238224055 REST JASPAR yes 22240906
chr2 238224036 238224055 REST JASPAR yes 68302806
chr2 238224036 238224055 REST JASPAR yes 82104342
chr2 238224062 238224080 SRF JASPAR yes 22240907
chr2 238224062 238224080 SRF JASPAR yes 68302807
chr2 238224062 238224080 SRF JASPAR yes 82104343
chr2 238224064 238224082 SRF JASPAR yes 22240908
chr2 238224064 238224082 SRF JASPAR yes 68302808
chr2 238224064 238224082 SRF JASPAR yes 82104344
chr2 238224065 238224070 ETS2 TRANSFAC yes 22240909
chr2 238224065 238224070 ETS2 TRANSFAC yes 68302809
chr2 238224065 238224070 ETS2 TRANSFAC yes 82104345
chr2 238224075 238224090 PRDM1 JASPAR yes 22240910
chr2 238224075 238224090 PRDM1 JASPAR yes 68302810
chr2 238224075 238224090 PRDM1 JASPAR yes 82104346
chr2 238224090 238224100 MAX JASPAR yes 22240911
chr2 238224090 238224100 MAX JASPAR yes 68302811
chr2 238224090 238224100 MAX JASPAR yes 82104347
chr2 238224090 238224101 USF1 JASPAR yes 22240912
chr2 238224090 238224101 USF2 JASPAR yes 22240913
chr2 238224090 238224101 USF1 JASPAR yes 68302812
chr2 238224090 238224101 USF2 JASPAR yes 68302813
chr2 238224090 238224101 USF1 JASPAR yes 82104348
chr2 238224090 238224101 USF2 JASPAR yes 82104349
chr2 238224091 238224101 TFEB JASPAR yes 22240914
chr2 238224091 238224101 TFEC JASPAR yes 22240915
chr2 238224091 238224101 TFEB JASPAR yes 68302814
chr2 238224091 238224101 TFEC JASPAR yes 68302815
chr2 238224091 238224101 TFEB JASPAR yes 82104350
chr2 238224091 238224101 TFEC JASPAR yes 82104351
chr2 238224116 238224135 REST JASPAR yes 22240916
chr2 238224116 238224135 REST JASPAR yes 68302816
chr2 238224116 238224135 REST JASPAR yes 82104352
chr2 238224137 238224142 H4TF1 TRANSFAC yes 22240917
chr2 238224137 238224142 H4TF1 TRANSFAC yes 68302817
chr2 238224137 238224142 H4TF1 TRANSFAC yes 82104353
chr2 238224163 238224167 LFA1 TRANSFAC yes 22240918
chr2 238224163 238224167 LFA1 TRANSFAC yes 68302818
chr2 238224163 238224167 LFA1 TRANSFAC yes 82104354
chr2 238224175 238224178 MYB TRANSFAC yes 22240919
chr2 238224175 238224178 MYB TRANSFAC yes 68302819
chr2 238224175 238224178 MYB TRANSFAC yes 82104355
chr2 238224201 238224216 PRDM1 JASPAR yes 22240920
chr2 238224201 238224216 PRDM1 JASPAR yes 68302820
chr2 238224201 238224216 PRDM1 JASPAR yes 82104356
chr2 238224209 238224223 ONECUT2 JASPAR yes 22240921
chr2 238224209 238224223 ONECUT2 JASPAR yes 68302821
chr2 238224209 238224223 ONECUT2 JASPAR yes 82104357
chr2 238224221 238224233 POU2F1 JASPAR yes 22240922
chr2 238224221 238224233 POU2F1 JASPAR yes 68302822
chr2 238224221 238224233 POU2F1 JASPAR yes 82104358
chr2 238224224 238224229 MYB TRANSFAC yes 22240923
chr2 238224224 238224229 MYB TRANSFAC yes 68302823
chr2 238224224 238224229 MYB TRANSFAC yes 82104359
chr2 238224227 238224241 POU1F1 JASPAR yes 22240924
chr2 238224227 238224241 POU1F1 JASPAR yes 68302824
chr2 238224227 238224241 POU1F1 JASPAR yes 82104360
chr2 238224237 238224244 NKX3-1 JASPAR yes 22240925
chr2 238224237 238224244 NKX3-1 JASPAR yes 68302825
chr2 238224237 238224244 NKX3-1 JASPAR yes 82104361
chr2 238224256 238224265 SOX9 JASPAR yes 22240926
chr2 238224256 238224265 SOX9 JASPAR yes 68302826
chr2 238224256 238224265 SOX9 JASPAR yes 82104362
chr2 238224269 238224277 TEAD3 JASPAR yes 22240927
chr2 238224269 238224277 TEAD3 JASPAR yes 68302827
chr2 238224269 238224277 TEAD3 JASPAR yes 82104363
chr2 238224294 238224298 H4TF2 TRANSFAC yes 22240928
chr2 238224294 238224298 H4TF2 TRANSFAC yes 68302828
chr2 238224294 238224298 H4TF2 TRANSFAC yes 82104364
chr2 238224306 238224321 MEF2C JASPAR yes 22240929
chr2 238224306 238224321 MEF2C JASPAR yes 68302829
chr2 238224306 238224321 MEF2C JASPAR yes 82104365
chr2 238224309 238224313 YY1 TRANSFAC yes 22240930
chr2 238224309 238224313 YY1 TRANSFAC yes 68302830
chr2 238224309 238224313 YY1 TRANSFAC yes 82104366
chr2 238224339 238224343 TEAD2 TRANSFAC yes 22240931
chr2 238224339 238224343 TEAD2 TRANSFAC yes 68302831
chr2 238224339 238224343 TEAD2 TRANSFAC yes 82104367
chr2 238224339 238224344 TBP TRANSFAC yes 22240932
chr2 238224339 238224344 TBP TRANSFAC yes 68302832
chr2 238224339 238224344 TBP TRANSFAC yes 82104368
chr2 238224339 238224345 TMF TRANSFAC yes 22240933
chr2 238224339 238224345 TMF TRANSFAC yes 68302833
chr2 238224339 238224345 TMF TRANSFAC yes 82104369
SNP sites on vista35396[chr2:238223884-238224369]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238223955 rs11677932 G A
CTCF MEF2A MEF2B MEF2C MEF2D REST
6478911
chr2 238224046 rs11695306 A G
CTCF REST SRF USF1
6478912
chr2 238224136 rs140814198 C T
SRF USF1
6478913
chr2 238224137 rs144425798 G A
H4TF1 SRF USF1
6478914
chr2 238224242 rs11883931 T C,G
NKX3-1
6478915
chr2 238224281 rs11887733 G A no 6478916
chr2 238224324 rs147839483 A T no 6478917
chr2 238224335 rs6744212 A G no 6478918
chr2 238224359 rs6729646 C T no 6478919
Genes possibly regulated by vista35396[chr2:238223884-238224369]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238165734 238166319 + AC112715.2 ENSG00000224132.2 238165734 0.87 1.0 3285 41850
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 1351
Expression level of Genes
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miRNAs possibly regulated by vista35396[chr2:238223884-238224369]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results