EnhancerDB
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  3. vista3540[chr1:158994687-158995148]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3540[chr1:158994687-158995148]
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Tissue distribution of vista3540
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Transcription factor that possibly regulate vista3540[chr1:158994687-158995148]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 158994689 158994703 RORA JASPAR yes 118381650
chr1 158994690 158994701 BATF JASPAR yes 118381651
chr1 158994706 158994710 H4TF2 TRANSFAC yes 118381652
chr1 158994717 158994729 NHLH1 JASPAR yes 118381653
chr1 158994718 158994728 NHLH1 JASPAR yes 118381654
chr1 158994718 158994728 TFAP4 JASPAR yes 118381655
chr1 158994719 158994738 REST JASPAR yes 118381656
chr1 158994725 158994737 HINFP JASPAR yes 118381657
chr1 158994740 158994752 HNF1B JASPAR yes 118381658
chr1 158994749 158994757 FOXL1 JASPAR yes 118381659
chr1 158994763 158994767 H4TF2 TRANSFAC yes 118381660
chr1 158994776 158994797 IRF1 JASPAR yes 118381661
chr1 158994778 158994793 STAT2 JASPAR yes 118381662
chr1 158994785 158994800 LEF1 JASPAR yes 118381663
chr1 158994795 158994810 LEF1 JASPAR yes 118381664
chr1 158994796 158994810 TCF7L2 JASPAR yes 118381665
chr1 158994890 158994911 IRF1 JASPAR yes 118381666
chr1 158994892 158994913 ZNF263 JASPAR yes 118381667
chr1 158994894 158994908 STAT1 JASPAR yes 118381668
chr1 158994894 158994909 PRDM1 JASPAR yes 118381669
chr1 158994894 158994909 STAT2 JASPAR yes 118381670
chr1 158994896 158994917 IRF1 JASPAR yes 118381671
chr1 158994899 158994913 IRF7 JASPAR yes 118381672
chr1 158994904 158994914 NFATC3 JASPAR yes 118381673
chr1 158994906 158994913 NFATC2 JASPAR yes 118381674
chr1 158994909 158994923 POU1F1 JASPAR yes 118381675
chr1 158994910 158994922 POU3F1 JASPAR yes 118381676
chr1 158994910 158994922 POU3F2 JASPAR yes 118381677
chr1 158994910 158994923 POU3F3 JASPAR yes 118381678
chr1 158994911 158994923 POU2F1 JASPAR yes 118381679
chr1 158994912 158994921 POU3F4 JASPAR yes 118381680
chr1 158994912 158994921 POU5F1B JASPAR yes 118381681
chr1 158994919 158994923 TEAD2 TRANSFAC yes 118381682
chr1 158994925 158994931 TCF4 TRANSFAC yes 118381683
chr1 158994935 158994940 GATA2 JASPAR yes 118381684
chr1 158994955 158994967 CREB1 JASPAR yes 118381685
chr1 158994964 158994975 E2F4 JASPAR yes 118381686
chr1 158994964 158994975 E2F6 JASPAR yes 118381687
chr1 158994965 158994976 E2F1 JASPAR yes 118381688
chr1 158994990 158994995 SP1 TRANSFAC yes 118381689
chr1 158994991 158995002 EBF1 JASPAR yes 118381690
chr1 158995029 158995036 E2F1 TRANSFAC yes 118381691
chr1 158995031 158995048 RARA JASPAR yes 118381692
chr1 158995065 158995076 ESRRB JASPAR yes 118381693
chr1 158995067 158995082 TFAP2A JASPAR yes 118381694
chr1 158995067 158995082 TFAP2C JASPAR yes 118381695
chr1 158995073 158995078 TFAP2A TRANSFAC yes 118381696
chr1 158995073 158995079 MZF1 JASPAR yes 118381697
chr1 158995077 158995097 ESR1 JASPAR yes 118381698
chr1 158995080 158995098 ESR2 JASPAR yes 118381699
chr1 158995081 158995099 ESR1 JASPAR yes 118381700
chr1 158995081 158995099 ESR2 JASPAR yes 118381701
chr1 158995082 158995097 ESR2 JASPAR yes 118381702
chr1 158995082 158995102 ESR1 JASPAR yes 118381703
chr1 158995083 158995087 LFA1 TRANSFAC yes 118381704
chr1 158995093 158995102 ZEB1 JASPAR yes 118381705
chr1 158995117 158995123 TBP TRANSFAC yes 118381706
chr1 158995119 158995131 FOXC2 JASPAR yes 118381707
chr1 158995121 158995135 FOXF2 JASPAR yes 118381708
chr1 158995121 158995136 FOXP1 JASPAR yes 118381709
chr1 158995122 158995133 FOXA1 JASPAR yes 118381710
chr1 158995122 158995137 FOXA1 JASPAR yes 118381711
chr1 158995123 158995135 FOXC2 JASPAR yes 118381712
chr1 158995124 158995135 FOXP2 JASPAR yes 118381713
chr1 158995124 158995136 FOXI1 JASPAR yes 118381714
chr1 158995126 158995134 FOXG1 JASPAR yes 118381715
chr1 158995134 158995138 YY1 TRANSFAC yes 118381716
chr1 158995141 158995145 YY1 TRANSFAC yes 118381717
SNP sites on vista3540[chr1:158994687-158995148]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 158994721 rs150391185 C G
NHLH1 REST TFAP4
660050
chr1 158994729 rs145197719 C G,T
HINFP NHLH1 REST
660051
chr1 158994737 rs2793839 G A
HINFP REST
660052
chr1 158994783 rs180897190 T G
IRF1 STAT2
660053
chr1 158994804 rs116527522 C T
LEF1 TCF7L2
660054
chr1 158994836 rs543597614 G GT no 660055
chr1 158994839 rs532443104 C T no 660056
chr1 158994847 rs186317565 C T no 660057
chr1 158994965 rs190338416 G A,T
CREB1 E2F1 E2F4 E2F6
660058
chr1 158994979 rs547991000 T A no 660059
chr1 158995016 rs79350610 G C no 660060
chr1 158995046 rs75274238 C A
RARA
660061
chr1 158995096 rs75684027 T A
ESR1 ESR2 ZEB1
660062
chr1 158995109 rs79746723 C G no 660063
Genes possibly regulated by vista3540[chr1:158994687-158995148]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 158900586 158946844 + PYHIN1 ENSG00000163564.10 158900586 0.98 1.0 1418 5899
chr1 158969758 159024945 + IFI16 ENSG00000163565.14 158969758 0.79 0.92 1419 75071
Expression level of Genes
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miRNAs possibly regulated by vista3540[chr1:158994687-158995148]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results