EnhancerDB
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  3. vista35401[chr2:238320410-238321055]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35401[chr2:238320410-238321055]
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Tissue distribution of vista35401
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Transcription factor that possibly regulate vista35401[chr2:238320410-238321055]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238320407 238320422 MEF2C JASPAR yes 22241180
chr2 238320407 238320422 MEF2C JASPAR yes 82106889
chr2 238320416 238320428 PBX1 JASPAR yes 22241181
chr2 238320416 238320428 PBX1 JASPAR yes 82106890
chr2 238320431 238320446 TP53 JASPAR yes 22241182
chr2 238320431 238320446 TP53 JASPAR yes 82106891
chr2 238320436 238320450 TLX1 JASPAR yes 22241183
chr2 238320436 238320450 TLX1 JASPAR yes 82106892
chr2 238320441 238320445 YY1 TRANSFAC yes 22241184
chr2 238320441 238320445 YY1 TRANSFAC yes 82106893
chr2 238320445 238320456 USF2 JASPAR yes 22241185
chr2 238320445 238320456 USF2 JASPAR yes 82106894
chr2 238320445 238320457 PKNOX2 JASPAR yes 22241186
chr2 238320445 238320457 PKNOX2 JASPAR yes 82106895
chr2 238320457 238320466 ZEB1 JASPAR yes 22241187
chr2 238320457 238320466 ZEB1 JASPAR yes 82106896
chr2 238320460 238320465 USF2 TRANSFAC yes 22241188
chr2 238320460 238320465 USF2 TRANSFAC yes 82106897
chr2 238320460 238320474 PLAG1 JASPAR yes 22241189
chr2 238320460 238320474 PLAG1 JASPAR yes 82106898
chr2 238320501 238320507 NFIC JASPAR yes 22241190
chr2 238320501 238320507 NFIC JASPAR yes 82106899
chr2 238320519 238320534 HNF4G JASPAR yes 22241191
chr2 238320519 238320534 HNF4G JASPAR yes 82106900
chr2 238320520 238320525 SP1 TRANSFAC yes 22241192
chr2 238320520 238320525 SP1 TRANSFAC yes 82106901
chr2 238320520 238320534 NR2F1 JASPAR yes 22241193
chr2 238320520 238320534 NR2F1 JASPAR yes 82106902
chr2 238320520 238320535 HNF4A JASPAR yes 22241194
chr2 238320520 238320535 HNF4A JASPAR yes 82106903
chr2 238320532 238320535 MYB TRANSFAC yes 22241195
chr2 238320532 238320535 MYB TRANSFAC yes 82106904
chr2 238320532 238320545 HSF1 JASPAR yes 22241196
chr2 238320532 238320545 HSF2 JASPAR yes 22241197
chr2 238320532 238320545 HSF1 JASPAR yes 82106905
chr2 238320532 238320545 HSF2 JASPAR yes 82106906
chr2 238320533 238320545 TEAD1 JASPAR yes 22241198
chr2 238320533 238320545 TEAD1 JASPAR yes 82106907
chr2 238320533 238320549 SOX8 JASPAR yes 22241199
chr2 238320533 238320549 SOX8 JASPAR yes 82106908
chr2 238320536 238320551 HSF1 JASPAR yes 22241200
chr2 238320536 238320551 HSF1 JASPAR yes 82106909
chr2 238320537 238320550 HSF1 JASPAR yes 22241201
chr2 238320537 238320550 HSF2 JASPAR yes 22241202
chr2 238320537 238320550 HSF4 JASPAR yes 22241203
chr2 238320537 238320550 HSF1 JASPAR yes 82106910
chr2 238320537 238320550 HSF2 JASPAR yes 82106911
chr2 238320537 238320550 HSF4 JASPAR yes 82106912
chr2 238320547 238320562 RFX5 JASPAR yes 22241204
chr2 238320547 238320562 RFX5 JASPAR yes 82106913
chr2 238320548 238320554 MZF1 JASPAR yes 22241205
chr2 238320548 238320554 MZF1 JASPAR yes 82106914
chr2 238320556 238320570 GLIS3 JASPAR yes 22241206
chr2 238320556 238320570 GLIS3 JASPAR yes 82106915
chr2 238320588 238320592 H1TF2 TRANSFAC yes 22241207
chr2 238320588 238320592 NFE TRANSFAC yes 22241208
chr2 238320588 238320592 SRF TRANSFAC yes 22241209
chr2 238320588 238320592 H1TF2 TRANSFAC yes 82106916
chr2 238320588 238320592 NFE TRANSFAC yes 82106917
chr2 238320588 238320592 SRF TRANSFAC yes 82106918
chr2 238320597 238320602 GATA2 JASPAR yes 22241210
chr2 238320597 238320602 GATA2 JASPAR yes 82106919
chr2 238320601 238320612 NFKB1 JASPAR yes 22241211
chr2 238320601 238320612 NFKB1 JASPAR yes 82106920
chr2 238320606 238320626 ESR1 JASPAR yes 22241212
chr2 238320606 238320626 ESR1 JASPAR yes 82106921
chr2 238320641 238320646 ETS2 TRANSFAC yes 22241213
chr2 238320641 238320646 ETS2 TRANSFAC yes 82106922
chr2 238320643 238320664 ZNF263 JASPAR yes 22241214
chr2 238320643 238320664 ZNF263 JASPAR yes 82106923
chr2 238320673 238320684 FLI1 JASPAR yes 22241215
chr2 238320673 238320684 FLI1 JASPAR yes 82106924
chr2 238320674 238320687 ELF1 JASPAR yes 22241216
chr2 238320674 238320687 ELF1 JASPAR yes 82106925
chr2 238320719 238320732 ZBTB18 JASPAR yes 22241217
chr2 238320719 238320732 ZBTB18 JASPAR yes 82106926
chr2 238320748 238320754 SOX10 JASPAR yes 22241218
chr2 238320748 238320754 SOX10 JASPAR yes 82106927
chr2 238320750 238320770 TP63 JASPAR yes 22241219
chr2 238320750 238320770 TP63 JASPAR yes 82106928
chr2 238320751 238320769 TP73 JASPAR yes 22241220
chr2 238320751 238320769 TP73 JASPAR yes 82106929
chr2 238320752 238320767 TP53 JASPAR yes 22241221
chr2 238320752 238320767 TP53 JASPAR yes 82106930
chr2 238320755 238320765 SMAD3 JASPAR yes 22241222
chr2 238320755 238320765 SMAD3 JASPAR yes 82106931
chr2 238320763 238320776 ZBTB18 JASPAR yes 22241223
chr2 238320763 238320776 ZBTB18 JASPAR yes 82106932
chr2 238320765 238320775 MSC JASPAR yes 22241224
chr2 238320765 238320775 MYF6 JASPAR yes 22241225
chr2 238320765 238320775 NHLH1 JASPAR yes 22241226
chr2 238320765 238320775 TFAP4 JASPAR yes 22241227
chr2 238320765 238320775 MSC JASPAR yes 82106933
chr2 238320765 238320775 MYF6 JASPAR yes 82106934
chr2 238320765 238320775 NHLH1 JASPAR yes 82106935
chr2 238320765 238320775 TFAP4 JASPAR yes 82106936
chr2 238320788 238320794 LEF1 TRANSFAC yes 22241228
chr2 238320788 238320794 SOX10 JASPAR yes 22241229
chr2 238320788 238320794 LEF1 TRANSFAC yes 82106937
chr2 238320788 238320794 SOX10 JASPAR yes 82106938
chr2 238320798 238320817 PAX5 JASPAR yes 22241230
chr2 238320798 238320817 PAX5 JASPAR yes 82106939
chr2 238320806 238320812 MZF1 JASPAR yes 22241231
chr2 238320806 238320812 MZF1 JASPAR yes 82106940
chr2 238320815 238320829 TCF7L2 JASPAR yes 22241232
chr2 238320815 238320829 TCF7L2 JASPAR yes 82106941
chr2 238320838 238320848 NKX2-3 JASPAR yes 22241233
chr2 238320838 238320848 NKX2-3 JASPAR yes 82106942
chr2 238320839 238320848 NKX2-8 JASPAR yes 22241234
chr2 238320839 238320848 NKX2-8 JASPAR yes 82106943
chr2 238320863 238320867 H4TF2 TRANSFAC yes 22241235
chr2 238320863 238320867 H4TF2 TRANSFAC yes 82106944
chr2 238320866 238320872 SP1 TRANSFAC yes 22241236
chr2 238320866 238320872 SP1 TRANSFAC yes 82106945
chr2 238320866 238320876 SP1 JASPAR yes 22241237
chr2 238320866 238320876 SP1 JASPAR yes 82106946
chr2 238320868 238320889 ZNF263 JASPAR yes 22241238
chr2 238320868 238320889 ZNF263 JASPAR yes 82106947
chr2 238320871 238320892 ZNF263 JASPAR yes 22241239
chr2 238320871 238320892 ZNF263 JASPAR yes 82106948
chr2 238320878 238320893 NR2C2 JASPAR yes 22241240
chr2 238320878 238320893 NR2C2 JASPAR yes 82106949
chr2 238320884 238320903 CTCF JASPAR yes 22241241
chr2 238320884 238320903 CTCF JASPAR yes 82106950
chr2 238320888 238320899 EBF1 JASPAR yes 22241242
chr2 238320888 238320899 EBF1 JASPAR yes 82106951
chr2 238320897 238320907 SREBF1 JASPAR yes 22241243
chr2 238320897 238320907 SREBF1 JASPAR yes 82106952
chr2 238320908 238320914 SP1 TRANSFAC yes 22241244
chr2 238320908 238320914 SP1 TRANSFAC yes 82106953
chr2 238320909 238320914 SP1 TRANSFAC yes 22241245
chr2 238320909 238320914 SP1 TRANSFAC yes 82106954
chr2 238320931 238320935 ESR1 TRANSFAC yes 22241246
chr2 238320931 238320935 ESR1 TRANSFAC yes 82106955
chr2 238320946 238320967 ZNF263 JASPAR yes 22241247
chr2 238320946 238320967 ZNF263 JASPAR yes 82106956
chr2 238320947 238320956 SP1 TRANSFAC yes 22241248
chr2 238320947 238320956 SP1 TRANSFAC yes 82106957
chr2 238320948 238320954 SP1 TRANSFAC yes 22241249
chr2 238320948 238320954 SP1 TRANSFAC yes 82106958
chr2 238320948 238320958 SP1 JASPAR yes 22241250
chr2 238320948 238320958 SP1 JASPAR yes 82106959
chr2 238320949 238320956 SP1 TRANSFAC yes 22241251
chr2 238320949 238320956 SP1 TRANSFAC yes 82106960
chr2 238320950 238320955 SP1 TRANSFAC yes 22241252
chr2 238320950 238320955 SP1 TRANSFAC yes 82106961
chr2 238320950 238320956 SP1 TRANSFAC yes 22241253
chr2 238320950 238320956 SP1 TRANSFAC yes 82106962
chr2 238320959 238320963 H4TF2 TRANSFAC yes 22241254
chr2 238320959 238320963 H4TF2 TRANSFAC yes 82106963
chr2 238320975 238320989 PAX6 JASPAR yes 22241255
chr2 238320975 238320989 PAX6 JASPAR yes 82106964
chr2 238321016 238321036 TBX19 JASPAR yes 22241256
chr2 238321016 238321036 TBX19 JASPAR yes 82106965
chr2 238321018 238321034 T JASPAR yes 22241257
chr2 238321018 238321034 T JASPAR yes 82106966
chr2 238321036 238321040 YY1 TRANSFAC yes 22241258
chr2 238321036 238321040 YY1 TRANSFAC yes 82106967
SNP sites on vista35401[chr2:238320410-238321055]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238320480 rs114419061 T C no 6479222
chr2 238320537 rs74001309 A T
HSF1 HSF2 HSF4 SOX8 TEAD1
6479223
chr2 238320668 rs531096589 C A no 6479224
chr2 238320780 rs2325812 C G no 6479225
chr2 238320785 rs192437277 T C no 6479226
chr2 238320933 rs540058485 G A
ESR1
6479227
chr2 238320981 rs79154045 G A
PAX6
6479228
Genes possibly regulated by vista35401[chr2:238320410-238321055]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 98037
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 87136
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 26984
Expression level of Genes
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miRNAs possibly regulated by vista35401[chr2:238320410-238321055]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results