EnhancerDB
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  3. vista35405[chr2:238383141-238383356]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35405[chr2:238383141-238383356]
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Tissue distribution of vista35405
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Transcription factor that possibly regulate vista35405[chr2:238383141-238383356]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238383160 238383167 E2F1 TRANSFAC yes 22241361
chr2 238383160 238383167 E2F1 TRANSFAC yes 82114135
chr2 238383162 238383173 NFKB1 JASPAR yes 22241362
chr2 238383162 238383173 NFKB1 JASPAR yes 82114136
chr2 238383190 238383210 RREB1 JASPAR yes 22241363
chr2 238383190 238383210 RREB1 JASPAR yes 82114137
chr2 238383191 238383211 RREB1 JASPAR yes 22241364
chr2 238383191 238383211 RREB1 JASPAR yes 82114138
chr2 238383196 238383216 RREB1 JASPAR yes 22241365
chr2 238383196 238383216 RREB1 JASPAR yes 82114139
chr2 238383197 238383217 RREB1 JASPAR yes 22241366
chr2 238383197 238383217 RREB1 JASPAR yes 82114140
chr2 238383206 238383211 TFAP2A TRANSFAC yes 22241367
chr2 238383206 238383211 TFAP2A TRANSFAC yes 82114141
chr2 238383206 238383212 MZF1 JASPAR yes 22241368
chr2 238383206 238383212 MZF1 JASPAR yes 82114142
chr2 238383207 238383217 SP1 JASPAR yes 22241369
chr2 238383207 238383217 SP1 JASPAR yes 82114143
chr2 238383229 238383240 NFKB1 JASPAR yes 22241370
chr2 238383229 238383240 NFKB1 JASPAR yes 82114144
chr2 238383230 238383240 NFKB1 JASPAR yes 22241371
chr2 238383230 238383240 NFKB1 JASPAR yes 82114145
chr2 238383231 238383246 TFAP2C JASPAR yes 22241372
chr2 238383231 238383246 TFAP2C JASPAR yes 82114146
chr2 238383234 238383245 TFAP2A JASPAR yes 22241373
chr2 238383234 238383245 TFAP2B JASPAR yes 22241374
chr2 238383234 238383245 TFAP2C JASPAR yes 22241375
chr2 238383234 238383245 TFAP2A JASPAR yes 82114147
chr2 238383234 238383245 TFAP2B JASPAR yes 82114148
chr2 238383234 238383245 TFAP2C JASPAR yes 82114149
chr2 238383235 238383244 TFAP2A JASPAR yes 22241376
chr2 238383235 238383244 TFAP2A JASPAR yes 82114150
chr2 238383240 238383245 SP1 TRANSFAC yes 22241377
chr2 238383240 238383245 SP1 TRANSFAC yes 82114151
chr2 238383241 238383256 RUNX2 JASPAR yes 22241378
chr2 238383241 238383256 RUNX2 JASPAR yes 82114152
chr2 238383251 238383256 SP1 TRANSFAC yes 22241379
chr2 238383251 238383256 SP1 TRANSFAC yes 82114153
chr2 238383255 238383259 H4TF2 TRANSFAC yes 22241380
chr2 238383255 238383259 H4TF2 TRANSFAC yes 82114154
chr2 238383257 238383268 EBF1 JASPAR yes 22241381
chr2 238383257 238383268 EBF1 JASPAR yes 82114155
chr2 238383298 238383317 PAX5 JASPAR yes 22241382
chr2 238383298 238383317 PAX5 JASPAR yes 82114156
chr2 238383300 238383304 LFA1 TRANSFAC yes 22241383
chr2 238383300 238383304 LFA1 TRANSFAC yes 82114157
chr2 238383307 238383311 H4TF2 TRANSFAC yes 22241384
chr2 238383307 238383311 H4TF2 TRANSFAC yes 82114158
chr2 238383316 238383329 NR2F1 JASPAR yes 22241385
chr2 238383316 238383329 NR2F1 JASPAR yes 82114159
chr2 238383318 238383329 ESRRA JASPAR yes 22241386
chr2 238383318 238383329 ESRRB JASPAR yes 22241387
chr2 238383318 238383329 ESRRA JASPAR yes 82114160
chr2 238383318 238383329 ESRRB JASPAR yes 82114161
chr2 238383319 238383327 NR4A2 JASPAR yes 22241388
chr2 238383319 238383327 NR4A2 JASPAR yes 82114162
chr2 238383320 238383330 RORA JASPAR yes 22241389
chr2 238383320 238383330 RORA JASPAR yes 82114163
chr2 238383328 238383332 YY1 TRANSFAC yes 22241390
chr2 238383328 238383332 YY1 TRANSFAC yes 82114164
chr2 238383331 238383347 ZNF143 JASPAR yes 22241391
chr2 238383331 238383347 ZNF143 JASPAR yes 82114165
chr2 238383339 238383344 SP1 TRANSFAC yes 22241392
chr2 238383339 238383344 SP1 TRANSFAC yes 82114166
chr2 238383341 238383352 NFKB1 JASPAR yes 22241393
chr2 238383341 238383352 NFKB1 JASPAR yes 82114167
chr2 238383342 238383352 NFKB1 JASPAR yes 22241394
chr2 238383342 238383352 RELA JASPAR yes 22241395
chr2 238383342 238383352 NFKB1 JASPAR yes 82114168
chr2 238383342 238383352 RELA JASPAR yes 82114169
chr2 238383342 238383353 NFKB1 JASPAR yes 22241396
chr2 238383342 238383353 NFKB1 JASPAR yes 82114170
chr2 238383343 238383353 RELA JASPAR yes 22241397
chr2 238383343 238383353 REL JASPAR yes 22241398
chr2 238383343 238383353 RELA JASPAR yes 82114171
chr2 238383343 238383353 REL JASPAR yes 82114172
chr2 238383353 238383364 ELK4 JASPAR yes 22241399
chr2 238383353 238383364 FLI1 JASPAR yes 22241400
chr2 238383353 238383364 ELK4 JASPAR yes 82114173
chr2 238383353 238383364 FLI1 JASPAR yes 82114174
chr2 238383353 238383366 ELF3 JASPAR yes 22241401
chr2 238383353 238383366 ELF3 JASPAR yes 82114175
chr2 238383354 238383364 ELK1 JASPAR yes 22241402
chr2 238383354 238383364 ELK3 JASPAR yes 22241403
chr2 238383354 238383364 ERF JASPAR yes 22241404
chr2 238383354 238383364 ERG JASPAR yes 22241405
chr2 238383354 238383364 ETS1 JASPAR yes 22241406
chr2 238383354 238383364 ETV1 JASPAR yes 22241407
chr2 238383354 238383364 ETV3 JASPAR yes 22241408
chr2 238383354 238383364 ETV4 JASPAR yes 22241409
chr2 238383354 238383364 ETV5 JASPAR yes 22241410
chr2 238383354 238383364 ETV6 JASPAR yes 22241411
chr2 238383354 238383364 FEV JASPAR yes 22241412
chr2 238383354 238383364 FLI1 JASPAR yes 22241413
chr2 238383354 238383364 GABPA JASPAR yes 22241414
chr2 238383354 238383364 ELK1 JASPAR yes 82114176
chr2 238383354 238383364 ELK3 JASPAR yes 82114177
chr2 238383354 238383364 ERF JASPAR yes 82114178
chr2 238383354 238383364 ERG JASPAR yes 82114179
chr2 238383354 238383364 ETS1 JASPAR yes 82114180
chr2 238383354 238383364 ETV1 JASPAR yes 82114181
chr2 238383354 238383364 ETV3 JASPAR yes 82114182
chr2 238383354 238383364 ETV4 JASPAR yes 82114183
chr2 238383354 238383364 ETV5 JASPAR yes 82114184
chr2 238383354 238383364 ETV6 JASPAR yes 82114185
chr2 238383354 238383364 FEV JASPAR yes 82114186
chr2 238383354 238383364 FLI1 JASPAR yes 82114187
chr2 238383354 238383364 GABPA JASPAR yes 82114188
chr2 238383354 238383365 ELF5 JASPAR yes 22241415
chr2 238383354 238383365 ETV2 JASPAR yes 22241416
chr2 238383354 238383365 SPDEF JASPAR yes 22241417
chr2 238383354 238383365 ELF5 JASPAR yes 82114189
chr2 238383354 238383365 ETV2 JASPAR yes 82114190
chr2 238383354 238383365 SPDEF JASPAR yes 82114191
chr2 238383354 238383366 EHF JASPAR yes 22241418
chr2 238383354 238383366 ELF1 JASPAR yes 22241419
chr2 238383354 238383366 ELF4 JASPAR yes 22241420
chr2 238383354 238383366 EHF JASPAR yes 82114192
chr2 238383354 238383366 ELF1 JASPAR yes 82114193
chr2 238383354 238383366 ELF4 JASPAR yes 82114194
chr2 238383354 238383367 ELF1 JASPAR yes 22241421
chr2 238383354 238383367 ELF1 JASPAR yes 82114195
chr2 238383355 238383363 FEV JASPAR yes 22241422
chr2 238383355 238383363 FEV JASPAR yes 82114196
chr2 238383355 238383364 ELK4 JASPAR yes 22241423
chr2 238383355 238383364 ELK4 JASPAR yes 82114197
chr2 238383356 238383362 ETS1 JASPAR yes 22241424
chr2 238383356 238383362 SPI1 JASPAR yes 22241425
chr2 238383356 238383362 ETS1 JASPAR yes 82114198
chr2 238383356 238383362 SPI1 JASPAR yes 82114199
chr2 238383356 238383366 ELK1 JASPAR yes 22241426
chr2 238383356 238383366 ELK1 JASPAR yes 82114200
SNP sites on vista35405[chr2:238383141-238383356]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35405[chr2:238383141-238383356]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 39877
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 50778
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 89285
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 8139
Expression level of Genes
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miRNAs possibly regulated by vista35405[chr2:238383141-238383356]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.0006330616443776212 0.890444 0.0 1023
Expression level of miRNAs
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