EnhancerDB
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  3. vista35406[chr2:238384383-238384688]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35406[chr2:238384383-238384688]
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Tissue distribution of vista35406
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Transcription factor that possibly regulate vista35406[chr2:238384383-238384688]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238383736 238384412 ZBTB7A UCSC Txn Factor no Conserved 108435912
chr2 238384022 238384695 CTCF UCSC Txn Factor no Conserved 108435913
chr2 238384412 238384417 GATA2 JASPAR yes 22241427
chr2 238384412 238384417 GATA2 JASPAR yes 82114352
chr2 238384426 238384432 MZF1 JASPAR yes 22241428
chr2 238384426 238384432 MZF1 JASPAR yes 82114353
chr2 238384429 238384446 BCL6B JASPAR yes 22241429
chr2 238384429 238384446 BCL6B JASPAR yes 82114354
chr2 238384451 238384465 EBF1 JASPAR yes 22241430
chr2 238384451 238384465 EBF1 JASPAR yes 82114355
chr2 238384453 238384464 EBF1 JASPAR yes 22241431
chr2 238384453 238384464 EBF1 JASPAR yes 82114356
chr2 238384459 238384464 ETS2 TRANSFAC yes 22241432
chr2 238384459 238384464 ETS2 TRANSFAC yes 82114357
chr2 238384465 238384478 ELF1 JASPAR yes 22241433
chr2 238384465 238384478 ELF1 JASPAR yes 82114358
chr2 238384465 238384486 ZNF263 JASPAR yes 22241434
chr2 238384465 238384486 ZNF263 JASPAR yes 82114359
chr2 238384468 238384479 ELK4 JASPAR yes 22241435
chr2 238384468 238384479 FLI1 JASPAR yes 22241436
chr2 238384468 238384479 ELK4 JASPAR yes 82114360
chr2 238384468 238384479 FLI1 JASPAR yes 82114361
chr2 238384482 238384487 ETS2 TRANSFAC yes 22241437
chr2 238384482 238384487 ETS2 TRANSFAC yes 82114362
chr2 238384483 238384493 NFKB1 JASPAR yes 22241438
chr2 238384483 238384493 NFKB1 JASPAR yes 82114363
chr2 238384483 238384494 NFKB1 JASPAR yes 22241439
chr2 238384483 238384494 NFKB1 JASPAR yes 82114364
chr2 238384484 238384494 RELA JASPAR yes 22241440
chr2 238384484 238384494 REL JASPAR yes 22241441
chr2 238384484 238384494 RELA JASPAR yes 82114365
chr2 238384484 238384494 REL JASPAR yes 82114366
chr2 238384516 238384527 FOXB1 JASPAR yes 22241442
chr2 238384516 238384527 FOXB1 JASPAR yes 82114367
chr2 238384524 238384536 FOXI1 JASPAR yes 22241443
chr2 238384524 238384536 FOXI1 JASPAR yes 82114368
chr2 238384557 238384573 RFX2 JASPAR yes 22241444
chr2 238384557 238384573 RFX3 JASPAR yes 22241445
chr2 238384557 238384573 RFX4 JASPAR yes 22241446
chr2 238384557 238384573 RFX5 JASPAR yes 22241447
chr2 238384557 238384573 RFX2 JASPAR yes 82114369
chr2 238384557 238384573 RFX3 JASPAR yes 82114370
chr2 238384557 238384573 RFX4 JASPAR yes 82114371
chr2 238384557 238384573 RFX5 JASPAR yes 82114372
chr2 238384558 238384573 RUNX2 JASPAR yes 22241448
chr2 238384558 238384573 RUNX2 JASPAR yes 82114373
chr2 238384558 238384577 RFX2 JASPAR yes 22241449
chr2 238384558 238384577 RFX2 JASPAR yes 82114374
chr2 238384559 238384562 MYB TRANSFAC yes 22241450
chr2 238384559 238384562 MYB TRANSFAC yes 82114375
chr2 238384559 238384568 RUNX2 JASPAR yes 22241451
chr2 238384559 238384568 RUNX2 JASPAR yes 82114376
chr2 238384559 238384569 RUNX3 JASPAR yes 22241452
chr2 238384559 238384569 RUNX3 JASPAR yes 82114377
chr2 238384559 238384570 RUNX1 JASPAR yes 22241453
chr2 238384559 238384570 RUNX1 JASPAR yes 82114378
chr2 238384560 238384580 RREB1 JASPAR yes 22241454
chr2 238384560 238384580 RREB1 JASPAR yes 82114379
chr2 238384579 238384590 FOSL2 JASPAR yes 22241455
chr2 238384579 238384590 FOSL2 JASPAR yes 82114380
chr2 238384585 238384589 YY1 TRANSFAC yes 22241456
chr2 238384585 238384589 YY1 TRANSFAC yes 82114381
chr2 238384603 238384615 EHF JASPAR yes 22241457
chr2 238384603 238384615 EHF JASPAR yes 82114382
chr2 238384605 238384615 ETV3 JASPAR yes 22241458
chr2 238384605 238384615 ETV6 JASPAR yes 22241459
chr2 238384605 238384615 ETV3 JASPAR yes 82114383
chr2 238384605 238384615 ETV6 JASPAR yes 82114384
chr2 238384607 238384613 ETS1 JASPAR yes 22241460
chr2 238384607 238384613 SPI1 JASPAR yes 22241461
chr2 238384607 238384613 ETS1 JASPAR yes 82114385
chr2 238384607 238384613 SPI1 JASPAR yes 82114386
chr2 238384639 238384650 FOS JASPAR yes 22241462
chr2 238384639 238384650 FOSL1 JASPAR yes 22241463
chr2 238384639 238384650 JUND JASPAR yes 22241464
chr2 238384639 238384650 FOS JASPAR yes 82114387
chr2 238384639 238384650 FOSL1 JASPAR yes 82114388
chr2 238384639 238384650 JUND JASPAR yes 82114389
chr2 238384640 238384651 FOSL2 JASPAR yes 22241465
chr2 238384640 238384651 JUNB JASPAR yes 22241466
chr2 238384640 238384651 FOSL2 JASPAR yes 82114390
chr2 238384640 238384651 JUNB JASPAR yes 82114391
chr2 238384640 238384654 JUN JASPAR yes 22241467
chr2 238384640 238384654 JUN JASPAR yes 82114392
SNP sites on vista35406[chr2:238384383-238384688]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238384451 rs529811374 T TAG
CTCF EBF1
6480009
chr2 238384518 rs116243889 T C
CTCF FOXB1
6480010
chr2 238384530 rs551677993 A AAC
CTCF FOXI1
6480011
chr2 238384530 rs61041340 A AAC
CTCF FOXI1
6480012
Genes possibly regulated by vista35406[chr2:238384383-238384688]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 38635
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 49536
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 90617
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 9471
Expression level of Genes
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miRNAs possibly regulated by vista35406[chr2:238384383-238384688]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 238419611 238419631 + hsa-miR-6811-3p MIMAT0027523 238395893 0.0007048458149779736 0.890444 0.0 1023
Expression level of miRNAs
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