EnhancerDB
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  3. vista35412[chr2:238411273-238411418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35412[chr2:238411273-238411418]
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Tissue distribution of vista35412
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Transcription factor that possibly regulate vista35412[chr2:238411273-238411418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238411070 238411568 EP300 UCSC Txn Factor no Conserved 108435920
chr2 238411097 238411572 TCF12 UCSC Txn Factor no Conserved 108435921
chr2 238411118 238411504 FOSL2 UCSC Txn Factor no Conserved 108435922
chr2 238411153 238411465 NR3C1 UCSC Txn Factor no Conserved 108435923
chr2 238411247 238411458 FOXA1 UCSC Txn Factor no Conserved 108435924
chr2 238411250 238411456 FOXA2 UCSC Txn Factor no Conserved 108435925
chr2 238411285 238411300 AR JASPAR yes 22241698
chr2 238411285 238411300 AR JASPAR yes 82117120
chr2 238411285 238411302 NR3C1 JASPAR yes 22241699
chr2 238411285 238411302 NR3C2 JASPAR yes 22241700
chr2 238411285 238411302 NR3C1 JASPAR yes 82117121
chr2 238411285 238411302 NR3C2 JASPAR yes 82117122
chr2 238411319 238411331 HNF1B JASPAR yes 22241701
chr2 238411319 238411331 HNF1B JASPAR yes 82117123
chr2 238411334 238411340 NFIC JASPAR yes 22241702
chr2 238411334 238411340 NFIC JASPAR yes 82117124
chr2 238411361 238411373 CREB1 JASPAR yes 22241703
chr2 238411361 238411373 CREB1 JASPAR yes 82117125
chr2 238411363 238411377 CREB3 JASPAR yes 22241704
chr2 238411363 238411377 CREB3L1 JASPAR yes 22241705
chr2 238411363 238411377 CREB3 JASPAR yes 82117126
chr2 238411363 238411377 CREB3L1 JASPAR yes 82117127
chr2 238411364 238411378 XBP1 JASPAR yes 22241706
chr2 238411364 238411378 XBP1 JASPAR yes 82117128
chr2 238411366 238411371 ATF1 TRANSFAC yes 22241707
chr2 238411366 238411371 ATF1 TRANSFAC yes 82117129
chr2 238411370 238411376 ZNF354C JASPAR yes 22241708
chr2 238411370 238411376 ZNF354C JASPAR yes 82117130
chr2 238411383 238411394 FOXA1 JASPAR yes 22241709
chr2 238411383 238411394 FOXA1 JASPAR yes 82117131
chr2 238411383 238411398 FOXA1 JASPAR yes 22241710
chr2 238411383 238411398 FOXA1 JASPAR yes 82117132
SNP sites on vista35412[chr2:238411273-238411418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238411287 rs181892342 G A
AR EP300 FOSL2 FOXA1 FOXA2 NR3C1 NR3C2 TCF12
6480361
chr2 238411293 rs74001374 C T
AR EP300 FOSL2 FOXA1 FOXA2 NR3C1 NR3C2 TCF12
6480362
chr2 238411333 rs10182457 A C
EP300 FOSL2 FOXA1 FOXA2 NR3C1 TCF12
6480363
chr2 238411401 rs374303284 G T
EP300 FOSL2 FOXA1 FOXA2 NR3C1 TCF12
6480364
Genes possibly regulated by vista35412[chr2:238411273-238411418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 11745
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 22646
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 82798
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 36201
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 1161
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 11755
Expression level of Genes
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miRNAs possibly regulated by vista35412[chr2:238411273-238411418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results