EnhancerDB
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  3. vista35413[chr2:238421741-238422134]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35413[chr2:238421741-238422134]
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Tissue distribution of vista35413
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Transcription factor that possibly regulate vista35413[chr2:238421741-238422134]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238421376 238421821 CTCF UCSC Txn Factor no Conserved 108435926
chr2 238421742 238421757 FOXP1 JASPAR yes 22241711
chr2 238421742 238421757 FOXP1 JASPAR yes 82118411
chr2 238421743 238421758 FOXP1 JASPAR yes 22241712
chr2 238421743 238421758 FOXP1 JASPAR yes 82118412
chr2 238421744 238421750 TBP TRANSFAC yes 22241713
chr2 238421744 238421750 TBP TRANSFAC yes 82118413
chr2 238421744 238421759 FOXP1 JASPAR yes 22241714
chr2 238421744 238421759 FOXP1 JASPAR yes 82118414
chr2 238421745 238421760 FOXP1 JASPAR yes 22241715
chr2 238421745 238421760 FOXP1 JASPAR yes 82118415
chr2 238421745 238421766 IRF1 JASPAR yes 22241716
chr2 238421745 238421766 IRF1 JASPAR yes 82118416
chr2 238421746 238421761 FOXP1 JASPAR yes 22241717
chr2 238421746 238421761 FOXP1 JASPAR yes 82118417
chr2 238421746 238421767 IRF1 JASPAR yes 22241718
chr2 238421746 238421767 IRF1 JASPAR yes 82118418
chr2 238421747 238421762 FOXP1 JASPAR yes 22241719
chr2 238421747 238421762 FOXP1 JASPAR yes 82118419
chr2 238421747 238421768 IRF1 JASPAR yes 22241720
chr2 238421747 238421768 IRF1 JASPAR yes 82118420
chr2 238421748 238421763 FOXP1 JASPAR yes 22241721
chr2 238421748 238421763 FOXP1 JASPAR yes 82118421
chr2 238421749 238421764 FOXP1 JASPAR yes 22241722
chr2 238421749 238421764 FOXP1 JASPAR yes 82118422
chr2 238421768 238421774 TBP TRANSFAC yes 22241723
chr2 238421768 238421774 TBP TRANSFAC yes 82118423
chr2 238421779 238421791 MYBL1 JASPAR yes 22241724
chr2 238421779 238421791 MYBL1 JASPAR yes 82118424
chr2 238421787 238421798 CEBPA JASPAR yes 22241725
chr2 238421787 238421798 CEBPA JASPAR yes 82118425
chr2 238421792 238421806 RXRB JASPAR yes 22241726
chr2 238421792 238421806 RXRB JASPAR yes 82118426
chr2 238421841 238421855 PLAG1 JASPAR yes 22241727
chr2 238421841 238421855 PLAG1 JASPAR yes 82118427
chr2 238421846 238421857 EBF1 JASPAR yes 22241728
chr2 238421846 238421857 EBF1 JASPAR yes 82118428
chr2 238421926 238421937 ELK4 JASPAR yes 22241729
chr2 238421926 238421937 FLI1 JASPAR yes 22241730
chr2 238421926 238421937 ELK4 JASPAR yes 82118429
chr2 238421926 238421937 FLI1 JASPAR yes 82118430
chr2 238421931 238421943 NHLH1 JASPAR yes 22241731
chr2 238421931 238421943 NHLH1 JASPAR yes 82118431
chr2 238421941 238421947 YY1 JASPAR yes 22241732
chr2 238421941 238421947 YY1 JASPAR yes 82118432
chr2 238421942 238421956 TLX1 JASPAR yes 22241733
chr2 238421942 238421956 TLX1 JASPAR yes 82118433
chr2 238421943 238421957 TLX1 JASPAR yes 22241734
chr2 238421943 238421957 TLX1 JASPAR yes 82118434
chr2 238421948 238421954 YY1 JASPAR yes 22241735
chr2 238421948 238421954 YY1 JASPAR yes 82118435
chr2 238421948 238421966 SRF JASPAR yes 22241736
chr2 238421948 238421966 SRF JASPAR yes 82118436
chr2 238421959 238421964 ETS2 TRANSFAC yes 22241737
chr2 238421959 238421964 ETS2 TRANSFAC yes 82118437
chr2 238421959 238421967 EHF JASPAR yes 22241738
chr2 238421959 238421967 EHF JASPAR yes 82118438
chr2 238421964 238421977 NFKB1 JASPAR yes 22241739
chr2 238421964 238421977 NFKB2 JASPAR yes 22241740
chr2 238421964 238421977 NFKB1 JASPAR yes 82118439
chr2 238421964 238421977 NFKB2 JASPAR yes 82118440
chr2 238421965 238421976 NFKB1 JASPAR yes 22241741
chr2 238421965 238421976 NFKB1 JASPAR yes 82118441
chr2 238421966 238421976 NFKB1 JASPAR yes 22241742
chr2 238421966 238421976 RELA JASPAR yes 22241743
chr2 238421966 238421976 REL JASPAR yes 22241744
chr2 238421966 238421976 NFKB1 JASPAR yes 82118442
chr2 238421966 238421976 RELA JASPAR yes 82118443
chr2 238421966 238421976 REL JASPAR yes 82118444
chr2 238421983 238422003 ESR1 JASPAR yes 22241745
chr2 238421983 238422003 ESR1 JASPAR yes 82118445
chr2 238421986 238421995 HIC2 JASPAR yes 22241746
chr2 238421986 238421995 HIC2 JASPAR yes 82118446
chr2 238421989 238421993 LFA1 TRANSFAC yes 22241747
chr2 238421989 238421993 LFA1 TRANSFAC yes 82118447
chr2 238421994 238422004 SP1 JASPAR yes 22241748
chr2 238421994 238422004 SP1 JASPAR yes 82118448
chr2 238421998 238422008 MZF1 JASPAR yes 22241749
chr2 238421998 238422008 MZF1 JASPAR yes 82118449
chr2 238421999 238422020 ZNF263 JASPAR yes 22241750
chr2 238421999 238422020 ZNF263 JASPAR yes 82118450
chr2 238422028 238422043 PRDM1 JASPAR yes 22241751
chr2 238422028 238422043 PRDM1 JASPAR yes 82118451
chr2 238422031 238422042 E2F6 JASPAR yes 22241752
chr2 238422031 238422042 E2F6 JASPAR yes 82118452
chr2 238422045 238422057 ZBTB7B JASPAR yes 22241753
chr2 238422045 238422057 ZBTB7C JASPAR yes 22241754
chr2 238422045 238422057 ZBTB7B JASPAR yes 82118453
chr2 238422045 238422057 ZBTB7C JASPAR yes 82118454
chr2 238422079 238422093 BATF3 JASPAR yes 22241755
chr2 238422079 238422093 BATF3 JASPAR yes 82118455
chr2 238422080 238422092 JDP2 JASPAR yes 22241756
chr2 238422080 238422092 JDP2 JASPAR yes 82118456
chr2 238422082 238422087 ATF1 TRANSFAC yes 22241757
chr2 238422082 238422087 ATF1 TRANSFAC yes 82118457
chr2 238422082 238422090 CREB1 JASPAR yes 22241758
chr2 238422082 238422090 CREB1 JASPAR yes 82118458
chr2 238422084 238422089 ATF1 TRANSFAC yes 22241759
chr2 238422084 238422089 ATF1 TRANSFAC yes 82118459
chr2 238422101 238422114 POU3F3 JASPAR yes 22241760
chr2 238422101 238422114 POU3F3 JASPAR yes 82118460
chr2 238422102 238422114 POU3F1 JASPAR yes 22241761
chr2 238422102 238422114 POU3F2 JASPAR yes 22241762
chr2 238422102 238422114 POU3F1 JASPAR yes 82118461
chr2 238422102 238422114 POU3F2 JASPAR yes 82118462
chr2 238422103 238422112 POU3F4 JASPAR yes 22241763
chr2 238422103 238422112 POU3F4 JASPAR yes 82118463
chr2 238422105 238422120 RUNX2 JASPAR yes 22241764
chr2 238422105 238422120 RUNX2 JASPAR yes 82118464
chr2 238422107 238422117 TFEC JASPAR yes 22241765
chr2 238422107 238422117 TFEC JASPAR yes 82118465
chr2 238422107 238422118 USF2 JASPAR yes 22241766
chr2 238422107 238422118 USF2 JASPAR yes 82118466
chr2 238422108 238422118 MAX JASPAR yes 22241767
chr2 238422108 238422118 MAX JASPAR yes 82118467
chr2 238422110 238422131 IRF1 JASPAR yes 22241768
chr2 238422110 238422131 IRF1 JASPAR yes 82118468
chr2 238422112 238422127 STAT2 JASPAR yes 22241769
chr2 238422112 238422127 STAT2 JASPAR yes 82118469
chr2 238422114 238422126 IRF1 JASPAR yes 22241770
chr2 238422114 238422126 IRF1 JASPAR yes 82118470
chr2 238422114 238422128 IRF7 JASPAR yes 22241771
chr2 238422114 238422128 IRF7 JASPAR yes 82118471
chr2 238422114 238422129 IRF9 JASPAR yes 22241772
chr2 238422114 238422129 IRF9 JASPAR yes 82118472
chr2 238422115 238422130 MEF2A JASPAR yes 22241773
chr2 238422115 238422130 MEF2A JASPAR yes 82118473
chr2 238422116 238422131 MEF2C JASPAR yes 22241774
chr2 238422116 238422131 MEF2C JASPAR yes 82118474
chr2 238422116 238422137 IRF1 JASPAR yes 22241775
chr2 238422116 238422137 IRF1 JASPAR yes 82118475
chr2 238422118 238422133 STAT2 JASPAR yes 22241776
chr2 238422118 238422133 STAT2 JASPAR yes 82118476
chr2 238422119 238422123 YY1 TRANSFAC yes 22241777
chr2 238422119 238422123 YY1 TRANSFAC yes 82118477
chr2 238422120 238422132 IRF1 JASPAR yes 22241778
chr2 238422120 238422132 IRF1 JASPAR yes 82118478
chr2 238422120 238422134 IRF7 JASPAR yes 22241779
chr2 238422120 238422134 IRF7 JASPAR yes 82118479
chr2 238422122 238422128 TCF4 TRANSFAC yes 22241780
chr2 238422122 238422128 TCF4 TRANSFAC yes 82118480
chr2 238422122 238422137 FOXP1 JASPAR yes 22241781
chr2 238422122 238422137 FOXP1 JASPAR yes 82118481
chr2 238422123 238422132 SRY JASPAR yes 22241782
chr2 238422123 238422132 SRY JASPAR yes 82118482
chr2 238422123 238422134 FOXP2 JASPAR yes 22241783
chr2 238422123 238422134 FOXP2 JASPAR yes 82118483
chr2 238422134 238422138 NFE TRANSFAC yes 22241784
chr2 238422134 238422138 NFE TRANSFAC yes 82118484
SNP sites on vista35413[chr2:238421741-238422134]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238421745 rs558173943 TA T
CTCF FOXP1 IRF1 TBP
6480547
chr2 238421762 rs570881122 A G
CTCF FOXP1 IRF1
6480548
chr2 238421767 rs369583164 G T
CTCF IRF1
6480549
chr2 238421837 rs7582753 A C,G no 6480550
chr2 238421863 rs373050426 T C no 6480551
chr2 238421872 rs74898994 C A,T no 6480552
chr2 238421915 rs77115167 G A no 6480553
chr2 238421922 rs543566357 G C no 6480554
chr2 238421928 rs533495128 C T
ELK4 FLI1
6480555
chr2 238422089 rs547267914 C G
ATF1 BATF3 CREB1 JDP2
6480556
Genes possibly regulated by vista35413[chr2:238421741-238422134]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 1277
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 12178
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 72330
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 46917
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 11877
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 22471
Expression level of Genes
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miRNAs possibly regulated by vista35413[chr2:238421741-238422134]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results