EnhancerDB
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  3. vista35414[chr2:238507381-238507559]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35414[chr2:238507381-238507559]
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Tissue distribution of vista35414
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Transcription factor that possibly regulate vista35414[chr2:238507381-238507559]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238507374 238507392 NR3C1 JASPAR yes 22241785
chr2 238507374 238507392 NR3C1 JASPAR yes 82124234
chr2 238507376 238507381 ETS2 TRANSFAC yes 22241786
chr2 238507376 238507381 ETS2 TRANSFAC yes 82124235
chr2 238507381 238507396 PRDM1 JASPAR yes 22241787
chr2 238507381 238507396 PRDM1 JASPAR yes 82124236
chr2 238507382 238507396 SPIC JASPAR yes 22241788
chr2 238507382 238507396 SPIC JASPAR yes 82124237
chr2 238507390 238507394 NFE TRANSFAC yes 22241789
chr2 238507390 238507394 NFE TRANSFAC yes 82124238
chr2 238507390 238507403 SMAD2 JASPAR yes 22241790
chr2 238507390 238507403 SMAD2 JASPAR yes 82124239
chr2 238507406 238507424 ESR2 JASPAR yes 22241791
chr2 238507406 238507424 ESR2 JASPAR yes 82124240
chr2 238507408 238507412 NFE TRANSFAC yes 22241792
chr2 238507408 238507412 NFE TRANSFAC yes 82124241
chr2 238507408 238507428 ESR1 JASPAR yes 22241793
chr2 238507408 238507428 ESR1 JASPAR yes 82124242
chr2 238507438 238507442 TEAD2 TRANSFAC yes 22241794
chr2 238507438 238507442 TEAD2 TRANSFAC yes 82124243
chr2 238507440 238507443 MYB TRANSFAC yes 22241795
chr2 238507440 238507443 MYB TRANSFAC yes 82124244
chr2 238507483 238507486 MYB TRANSFAC yes 22241796
chr2 238507483 238507486 MYB TRANSFAC yes 82124245
chr2 238507522 238507528 MAZ TRANSFAC yes 22241797
chr2 238507522 238507528 MAZ TRANSFAC yes 82124246
chr2 238507543 238507555 TFAP2A JASPAR yes 22241798
chr2 238507543 238507555 TFAP2B JASPAR yes 22241799
chr2 238507543 238507555 TFAP2C JASPAR yes 22241800
chr2 238507543 238507555 TFAP2A JASPAR yes 82124247
chr2 238507543 238507555 TFAP2B JASPAR yes 82124248
chr2 238507543 238507555 TFAP2C JASPAR yes 82124249
chr2 238507543 238507558 TFAP2A JASPAR yes 22241801
chr2 238507543 238507558 TFAP2C JASPAR yes 22241802
chr2 238507543 238507558 TFAP2A JASPAR yes 82124250
chr2 238507543 238507558 TFAP2C JASPAR yes 82124251
SNP sites on vista35414[chr2:238507381-238507559]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238507421 rs77406783 C T
ESR1 ESR2
6481422
chr2 238507517 rs57134486 G A no 6481423
chr2 238507544 rs1317330 C G,T
TFAP2A TFAP2B TFAP2C
6481424
Genes possibly regulated by vista35414[chr2:238507381-238507559]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 67836
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 97302
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 92282
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 71340
Expression level of Genes
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miRNAs possibly regulated by vista35414[chr2:238507381-238507559]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results