EnhancerDB
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  3. vista35416[chr2:238512238-238512938]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35416[chr2:238512238-238512938]
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Tissue distribution of vista35416
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Transcription factor that possibly regulate vista35416[chr2:238512238-238512938]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238512513 238512730 GATA2 UCSC Txn Factor no Conserved 108435928
chr2 238512239 238512249 RORA JASPAR yes 22241851
chr2 238512243 238512258 ESR2 JASPAR yes 22241852
chr2 238512243 238512263 ESR1 JASPAR yes 22241853
chr2 238512244 238512248 ESR1 TRANSFAC yes 22241854
chr2 238512249 238512254 NFY TRANSFAC yes 22241855
chr2 238512251 238512257 NFIC JASPAR yes 22241856
chr2 238512278 238512284 NFIC JASPAR yes 22241857
chr2 238512296 238512300 NFE TRANSFAC yes 22241858
chr2 238512319 238512323 NFE TRANSFAC yes 22241859
chr2 238512319 238512332 SMAD2 JASPAR yes 22241860
chr2 238512345 238512349 LFA1 TRANSFAC yes 22241861
chr2 238512405 238512410 ATF1 TRANSFAC yes 22241862
chr2 238512410 238512424 SPI1 JASPAR yes 22241863
chr2 238512410 238512424 STAT1 JASPAR yes 22241864
chr2 238512410 238512425 STAT2 JASPAR yes 22241865
chr2 238512421 238512425 NFE TRANSFAC yes 22241866
chr2 238512427 238512442 HSF1 JASPAR yes 22241867
chr2 238512428 238512441 HSF1 JASPAR yes 22241868
chr2 238512428 238512441 HSF2 JASPAR yes 22241869
chr2 238512428 238512441 HSF4 JASPAR yes 22241870
chr2 238512444 238512459 HNF4G JASPAR yes 22241871
chr2 238512444 238512459 NR2C2 JASPAR yes 22241872
chr2 238512447 238512451 LFA1 TRANSFAC yes 22241873
chr2 238512451 238512466 STAT1 JASPAR yes 22241874
chr2 238512453 238512466 ELF1 JASPAR yes 22241875
chr2 238512454 238512466 EHF JASPAR yes 22241876
chr2 238512454 238512466 ELF1 JASPAR yes 22241877
chr2 238512454 238512466 ELF4 JASPAR yes 22241878
chr2 238512454 238512467 ELF3 JASPAR yes 22241879
chr2 238512455 238512466 ELF5 JASPAR yes 22241880
chr2 238512456 238512467 FLI1 JASPAR yes 22241881
chr2 238512457 238512465 FEV JASPAR yes 22241882
chr2 238512460 238512471 BATF JASPAR yes 22241883
chr2 238512555 238512571 SOX8 JASPAR yes 22241884
chr2 238512596 238512601 ETS2 TRANSFAC yes 22241885
chr2 238512597 238512618 ZNF263 JASPAR yes 22241886
chr2 238512601 238512622 ZNF263 JASPAR yes 22241887
chr2 238512604 238512624 RREB1 JASPAR yes 22241888
chr2 238512606 238512626 RREB1 JASPAR yes 22241889
chr2 238512607 238512628 ZNF263 JASPAR yes 22241890
chr2 238512608 238512628 RREB1 JASPAR yes 22241891
chr2 238512609 238512617 TBX5 JASPAR yes 22241892
chr2 238512613 238512623 SP1 JASPAR yes 22241893
chr2 238512616 238512621 SP1 TRANSFAC yes 22241894
chr2 238512640 238512654 FOXF2 JASPAR yes 22241895
chr2 238512640 238512655 FOXP1 JASPAR yes 22241896
chr2 238512642 238512653 FOXC1 JASPAR yes 22241897
chr2 238512642 238512654 FOXC2 JASPAR yes 22241898
chr2 238512643 238512651 GATA3 JASPAR yes 22241899
chr2 238512643 238512654 FOXP2 JASPAR yes 22241900
chr2 238512643 238512655 FOXI1 JASPAR yes 22241901
chr2 238512645 238512653 FOXG1 JASPAR yes 22241902
chr2 238512645 238512653 FOXO3 JASPAR yes 22241903
chr2 238512677 238512687 GSC JASPAR yes 22241904
chr2 238512678 238512686 OTX2 JASPAR yes 22241905
chr2 238512699 238512703 YY1 TRANSFAC yes 22241906
chr2 238512704 238512717 ELF3 JASPAR yes 22241907
chr2 238512705 238512716 ELF5 JASPAR yes 22241908
chr2 238512705 238512717 EHF JASPAR yes 22241909
chr2 238512705 238512718 ELF1 JASPAR yes 22241910
chr2 238512706 238512713 SPI1 JASPAR yes 22241911
chr2 238512706 238512714 FEV JASPAR yes 22241912
chr2 238512706 238512727 ZNF263 JASPAR yes 22241913
chr2 238512708 238512713 ETS2 TRANSFAC yes 22241914
chr2 238512715 238512736 ZNF263 JASPAR yes 22241915
chr2 238512742 238512747 MYB TRANSFAC yes 22241916
chr2 238512770 238512790 TP63 JASPAR yes 22241917
chr2 238512789 238512800 FOSL2 JASPAR yes 22241918
chr2 238512819 238512834 TFAP2A JASPAR yes 22241919
chr2 238512821 238512836 TFAP2C JASPAR yes 22241920
chr2 238512822 238512833 TFAP2A JASPAR yes 22241921
chr2 238512822 238512833 TFAP2B JASPAR yes 22241922
chr2 238512822 238512833 TFAP2C JASPAR yes 22241923
chr2 238512837 238512843 YY1 JASPAR yes 22241924
chr2 238512837 238512852 TFAP2A JASPAR yes 22241925
chr2 238512837 238512852 TFAP2C JASPAR yes 22241926
chr2 238512838 238512852 TLX1 JASPAR yes 22241927
chr2 238512839 238512853 TLX1 JASPAR yes 22241928
chr2 238512839 238512854 TFAP2A JASPAR yes 22241929
chr2 238512839 238512854 TFAP2C JASPAR yes 22241930
chr2 238512870 238512874 LFA1 TRANSFAC yes 22241931
chr2 238512881 238512892 NFKB1 JASPAR yes 22241932
chr2 238512888 238512900 PBX1 JASPAR yes 22241933
chr2 238512891 238512895 H1TF2 TRANSFAC yes 22241934
chr2 238512891 238512895 NFE TRANSFAC yes 22241935
chr2 238512891 238512895 SRF TRANSFAC yes 22241936
chr2 238512892 238512902 PAX3 JASPAR yes 22241937
chr2 238512892 238512902 PAX7 JASPAR yes 22241938
chr2 238512893 238512914 IRF1 JASPAR yes 22241939
chr2 238512894 238512915 IRF1 JASPAR yes 22241940
chr2 238512898 238512913 FOXP1 JASPAR yes 22241941
chr2 238512899 238512914 FOXP1 JASPAR yes 22241942
chr2 238512900 238512915 FOXP1 JASPAR yes 22241943
chr2 238512901 238512916 FOXP1 JASPAR yes 22241944
chr2 238512902 238512917 FOXP1 JASPAR yes 22241945
chr2 238512904 238512919 MEF2C JASPAR yes 22241946
chr2 238512923 238512938 FOXP1 JASPAR yes 22241947
SNP sites on vista35416[chr2:238512238-238512938]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238512396 rs59941433 C G no 6481435
chr2 238512449 rs182201474 G A
HNF4G LFA1 NR2C2
6481436
chr2 238512455 rs10929240 A G
EHF ELF1 ELF3 ELF4 ELF5 HNF4G NR2C2 STAT1
6481437
chr2 238512495 rs533632047 T G no 6481438
chr2 238512546 rs116353094 C A,T
GATA2
6481439
chr2 238512547 rs535690062 G A
GATA2
6481440
chr2 238512612 rs541610392 G A
GATA2 RREB1 TBX5 ZNF263
6481441
chr2 238512696 rs79076684 G A
GATA2
6481442
chr2 238512709 rs151283440 T C
EHF ELF1 ELF3 ELF5 ETS2 FEV GATA2 SPI1 ZNF263
6481443
chr2 238512744 rs116145921 T C
MYB
6481444
chr2 238512790 rs7606938 C T
FOSL2 TP63
6481445
chr2 238512808 rs35765143 G A no 6481446
chr2 238512834 rs7567645 A G
TFAP2A TFAP2C
6481447
chr2 238512888 rs13009583 C G
NFKB1 PBX1
6481448
chr2 238512899 rs35221262 AT A
FOXP1 IRF1 PAX3 PAX7 PBX1
6481449
chr2 238512914 rs9287623 T A
FOXP1 IRF1 MEF2C
6481450
Genes possibly regulated by vista35416[chr2:238512238-238512938]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 62979
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 98019
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 87425
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 76719
Expression level of Genes
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miRNAs possibly regulated by vista35416[chr2:238512238-238512938]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results