EnhancerDB
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  3. vista35427[chr2:238595538-238595801]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35427[chr2:238595538-238595801]
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Tissue distribution of vista35427
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Transcription factor that possibly regulate vista35427[chr2:238595538-238595801]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238595187 238595613 CTCF UCSC Txn Factor no Conserved 108435949
chr2 238595534 238595548 GLIS3 JASPAR yes 22242524
chr2 238595534 238595548 GLIS3 JASPAR yes 82132272
chr2 238595542 238595553 SPDEF JASPAR yes 22242525
chr2 238595542 238595553 SPDEF JASPAR yes 82132273
chr2 238595588 238595599 ESRRA JASPAR yes 22242526
chr2 238595588 238595599 ESRRA JASPAR yes 82132274
chr2 238595605 238595613 TBX5 JASPAR yes 22242527
chr2 238595605 238595613 TBX5 JASPAR yes 82132275
chr2 238595611 238595615 ESR1 TRANSFAC yes 22242528
chr2 238595611 238595615 ESR1 TRANSFAC yes 82132276
chr2 238595618 238595622 H4TF2 TRANSFAC yes 22242529
chr2 238595618 238595622 H4TF2 TRANSFAC yes 82132277
chr2 238595621 238595634 ELF1 JASPAR yes 22242530
chr2 238595621 238595634 ELF1 JASPAR yes 82132278
chr2 238595623 238595634 ELF5 JASPAR yes 22242531
chr2 238595623 238595634 ELF5 JASPAR yes 82132279
chr2 238595624 238595631 ETS1 TRANSFAC yes 22242532
chr2 238595624 238595631 ETS1 TRANSFAC yes 82132280
chr2 238595624 238595634 GABPA JASPAR yes 22242533
chr2 238595624 238595634 GABPA JASPAR yes 82132281
chr2 238595640 238595644 LFA1 TRANSFAC yes 22242534
chr2 238595640 238595644 LFA1 TRANSFAC yes 82132282
chr2 238595652 238595666 CREB3 JASPAR yes 22242535
chr2 238595652 238595666 CREB3 JASPAR yes 82132283
chr2 238595654 238595664 MLXIPL JASPAR yes 22242536
chr2 238595654 238595664 MLX JASPAR yes 22242537
chr2 238595654 238595664 MNT JASPAR yes 22242538
chr2 238595654 238595664 TFE3 JASPAR yes 22242539
chr2 238595654 238595664 MLXIPL JASPAR yes 82132284
chr2 238595654 238595664 MLX JASPAR yes 82132285
chr2 238595654 238595664 MNT JASPAR yes 82132286
chr2 238595654 238595664 TFE3 JASPAR yes 82132287
chr2 238595655 238595662 USF1 JASPAR yes 22242540
chr2 238595655 238595662 USF1 JASPAR yes 82132288
chr2 238595655 238595665 MAX JASPAR yes 22242541
chr2 238595655 238595665 MAX JASPAR yes 82132289
chr2 238595656 238595661 MYC TRANSFAC yes 22242542
chr2 238595656 238595661 USF1 TRANSFAC yes 22242543
chr2 238595656 238595661 USF2 TRANSFAC yes 22242544
chr2 238595656 238595661 MYC TRANSFAC yes 82132290
chr2 238595656 238595661 USF1 TRANSFAC yes 82132291
chr2 238595656 238595661 USF2 TRANSFAC yes 82132292
chr2 238595680 238595699 REST JASPAR yes 22242545
chr2 238595680 238595699 REST JASPAR yes 82132293
chr2 238595691 238595697 YY1 JASPAR yes 22242546
chr2 238595691 238595697 YY1 JASPAR yes 82132294
chr2 238595691 238595712 ZNF263 JASPAR yes 22242547
chr2 238595691 238595712 ZNF263 JASPAR yes 82132295
chr2 238595699 238595705 PEA3 TRANSFAC yes 22242548
chr2 238595699 238595705 PEA3 TRANSFAC yes 82132296
chr2 238595700 238595708 EHF JASPAR yes 22242549
chr2 238595700 238595708 EHF JASPAR yes 82132297
chr2 238595703 238595714 FLI1 JASPAR yes 22242550
chr2 238595703 238595714 FLI1 JASPAR yes 82132298
chr2 238595704 238595709 ETS2 TRANSFAC yes 22242551
chr2 238595704 238595709 ETS2 TRANSFAC yes 82132299
chr2 238595717 238595723 ATF1 TRANSFAC yes 22242552
chr2 238595717 238595723 ATF1 TRANSFAC yes 82132300
chr2 238595723 238595728 SP1 TRANSFAC yes 22242553
chr2 238595723 238595728 SP1 TRANSFAC yes 82132301
chr2 238595740 238595750 TEAD1 JASPAR yes 22242554
chr2 238595740 238595750 TEAD4 JASPAR yes 22242555
chr2 238595740 238595750 TEAD1 JASPAR yes 82132302
chr2 238595740 238595750 TEAD4 JASPAR yes 82132303
chr2 238595740 238595757 ZNF410 JASPAR yes 22242556
chr2 238595740 238595757 ZNF410 JASPAR yes 82132304
chr2 238595741 238595749 TEAD3 JASPAR yes 22242557
chr2 238595741 238595749 TEAD3 JASPAR yes 82132305
chr2 238595742 238595755 ATF4 JASPAR yes 22242558
chr2 238595742 238595755 ATF4 JASPAR yes 82132306
SNP sites on vista35427[chr2:238595538-238595801]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238595549 rs142967008 C T
CTCF SPDEF
6482531
chr2 238595607 rs147457501 G A
CTCF TBX5
6482532
chr2 238595714 rs59951178 G A
FLI1
6482533
chr2 238595720 rs74001251 C T
ATF1
6482534
chr2 238595773 rs59076761 A G no 6482535
chr2 238595789 rs571344604 C A,T no 6482536
chr2 238595798 rs77039701 G A no 6482537
Genes possibly regulated by vista35427[chr2:238595538-238595801]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 14719
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 4125
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 40681
Expression level of Genes
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miRNAs possibly regulated by vista35427[chr2:238595538-238595801]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results