EnhancerDB
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  3. vista35429[chr2:238597692-238598031]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35429[chr2:238597692-238598031]
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Tissue distribution of vista35429
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Transcription factor that possibly regulate vista35429[chr2:238597692-238598031]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238597692 238597707 FOXP1 JASPAR yes 22242603
chr2 238597692 238597707 FOXP1 JASPAR yes 82132605
chr2 238597693 238597708 FOXP1 JASPAR yes 22242604
chr2 238597693 238597708 FOXP1 JASPAR yes 82132606
chr2 238597693 238597714 IRF1 JASPAR yes 22242605
chr2 238597693 238597714 IRF1 JASPAR yes 82132607
chr2 238597694 238597709 FOXP1 JASPAR yes 22242606
chr2 238597694 238597709 FOXP1 JASPAR yes 82132608
chr2 238597695 238597716 IRF1 JASPAR yes 22242607
chr2 238597695 238597716 IRF1 JASPAR yes 82132609
chr2 238597696 238597711 FOXP1 JASPAR yes 22242608
chr2 238597696 238597711 FOXP1 JASPAR yes 82132610
chr2 238597714 238597725 E2F6 JASPAR yes 22242609
chr2 238597714 238597725 E2F6 JASPAR yes 82132611
chr2 238597714 238597728 PLAG1 JASPAR yes 22242610
chr2 238597714 238597728 PLAG1 JASPAR yes 82132612
chr2 238597715 238597720 SP1 TRANSFAC yes 22242611
chr2 238597715 238597720 SP1 TRANSFAC yes 82132613
chr2 238597718 238597728 SP1 JASPAR yes 22242612
chr2 238597718 238597728 SP1 JASPAR yes 82132614
chr2 238597777 238597781 YY1 TRANSFAC yes 22242613
chr2 238597777 238597781 YY1 TRANSFAC yes 82132615
chr2 238597802 238597806 YY1 TRANSFAC yes 22242614
chr2 238597802 238597806 YY1 TRANSFAC yes 82132616
chr2 238597817 238597827 HOXA13 JASPAR yes 22242615
chr2 238597817 238597827 HOXB13 JASPAR yes 22242616
chr2 238597817 238597827 HOXA13 JASPAR yes 82132617
chr2 238597817 238597827 HOXB13 JASPAR yes 82132618
chr2 238597822 238597832 NFATC3 JASPAR yes 22242617
chr2 238597822 238597832 NFATC3 JASPAR yes 82132619
chr2 238597824 238597831 NFATC2 JASPAR yes 22242618
chr2 238597824 238597831 NFATC2 JASPAR yes 82132620
chr2 238597828 238597843 SOX21 JASPAR yes 22242619
chr2 238597828 238597843 SOX21 JASPAR yes 82132621
chr2 238597828 238597844 SOX4 JASPAR yes 22242620
chr2 238597828 238597844 SOX4 JASPAR yes 82132622
chr2 238597834 238597842 DLX6 JASPAR yes 22242621
chr2 238597834 238597842 MSX1 JASPAR yes 22242622
chr2 238597834 238597842 DLX6 JASPAR yes 82132623
chr2 238597834 238597842 MSX1 JASPAR yes 82132624
chr2 238597853 238597864 HOXA10 JASPAR yes 22242623
chr2 238597853 238597864 HOXA10 JASPAR yes 82132625
chr2 238597854 238597863 CDX1 JASPAR yes 22242624
chr2 238597854 238597863 CDX1 JASPAR yes 82132626
chr2 238597854 238597864 HOXA13 JASPAR yes 22242625
chr2 238597854 238597864 HOXB13 JASPAR yes 22242626
chr2 238597854 238597864 HOXD13 JASPAR yes 22242627
chr2 238597854 238597864 HOXA13 JASPAR yes 82132627
chr2 238597854 238597864 HOXB13 JASPAR yes 82132628
chr2 238597854 238597864 HOXD13 JASPAR yes 82132629
chr2 238597876 238597882 ZNF354C JASPAR yes 22242628
chr2 238597876 238597882 ZNF354C JASPAR yes 82132630
chr2 238597888 238597892 YY1 TRANSFAC yes 22242629
chr2 238597888 238597892 YY1 TRANSFAC yes 82132631
chr2 238597910 238597925 MEF2C JASPAR yes 22242630
chr2 238597910 238597925 MEF2C JASPAR yes 82132632
chr2 238597935 238597944 POU3F4 JASPAR yes 22242631
chr2 238597935 238597944 POU5F1B JASPAR yes 22242632
chr2 238597935 238597944 POU3F4 JASPAR yes 82132633
chr2 238597935 238597944 POU5F1B JASPAR yes 82132634
chr2 238597955 238597970 HNF4A JASPAR yes 22242633
chr2 238597955 238597970 HNF4A JASPAR yes 82132635
chr2 238597956 238597970 NR2F1 JASPAR yes 22242634
chr2 238597956 238597970 NR2F1 JASPAR yes 82132636
chr2 238597956 238597971 HNF4G JASPAR yes 22242635
chr2 238597956 238597971 HNF4G JASPAR yes 82132637
chr2 238597960 238597966 TCF4 TRANSFAC yes 22242636
chr2 238597960 238597966 TCF4 TRANSFAC yes 82132638
chr2 238597969 238597990 REST JASPAR yes 22242637
chr2 238597969 238597990 REST JASPAR yes 82132639
chr2 238597970 238597989 REST JASPAR yes 22242638
chr2 238597970 238597989 REST JASPAR yes 82132640
chr2 238597974 238597979 TFAP2A TRANSFAC yes 22242639
chr2 238597974 238597979 TFAP2A TRANSFAC yes 82132641
chr2 238597974 238597980 MZF1 JASPAR yes 22242640
chr2 238597974 238597980 MZF1 JASPAR yes 82132642
chr2 238597986 238597993 JUN TRANSFAC yes 22242641
chr2 238597986 238597993 SP1 TRANSFAC yes 22242642
chr2 238597986 238597993 JUN TRANSFAC yes 82132643
chr2 238597986 238597993 SP1 TRANSFAC yes 82132644
SNP sites on vista35429[chr2:238597692-238598031]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238597694 rs536344921 G GAA
FOXP1 IRF1
6482569
chr2 238597694 rs60153114 G GAA
FOXP1 IRF1
6482570
chr2 238597790 rs6739947 C T no 6482571
chr2 238597797 rs10182428 G A no 6482572
chr2 238597857 rs138821445 A G
CDX1 HOXA10 HOXA13 HOXB13 HOXD13
6482573
chr2 238597929 rs184537298 A C no 6482574
chr2 238598006 rs545483293 G T no 6482575
Genes possibly regulated by vista35429[chr2:238597692-238598031]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 12565
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 1971
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 38527
Expression level of Genes
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miRNAs possibly regulated by vista35429[chr2:238597692-238598031]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results