EnhancerDB
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  3. vista35438[chr2:238804450-238804569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35438[chr2:238804450-238804569]
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Tissue distribution of vista35438
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Transcription factor that possibly regulate vista35438[chr2:238804450-238804569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238804451 238804466 TFAP2C JASPAR yes 22242870
chr2 238804451 238804466 TFAP2C JASPAR yes 68303642
chr2 238804451 238804466 TFAP2C JASPAR yes 82144093
chr2 238804453 238804465 TFAP2A JASPAR yes 22242871
chr2 238804453 238804465 TFAP2B JASPAR yes 22242872
chr2 238804453 238804465 TFAP2C JASPAR yes 22242873
chr2 238804453 238804465 TFAP2A JASPAR yes 68303643
chr2 238804453 238804465 TFAP2B JASPAR yes 68303644
chr2 238804453 238804465 TFAP2C JASPAR yes 68303645
chr2 238804453 238804465 TFAP2A JASPAR yes 82144094
chr2 238804453 238804465 TFAP2B JASPAR yes 82144095
chr2 238804453 238804465 TFAP2C JASPAR yes 82144096
chr2 238804453 238804468 TFAP2A JASPAR yes 22242874
chr2 238804453 238804468 TFAP2A JASPAR yes 68303646
chr2 238804453 238804468 TFAP2A JASPAR yes 82144097
chr2 238804454 238804465 EBF1 JASPAR yes 22242875
chr2 238804454 238804465 EBF1 JASPAR yes 68303647
chr2 238804454 238804465 EBF1 JASPAR yes 82144098
chr2 238804470 238804485 MEF2C JASPAR yes 22242876
chr2 238804470 238804485 MEF2C JASPAR yes 68303648
chr2 238804470 238804485 MEF2C JASPAR yes 82144099
chr2 238804471 238804486 MEF2A JASPAR yes 22242877
chr2 238804471 238804486 MEF2A JASPAR yes 68303649
chr2 238804471 238804486 MEF2A JASPAR yes 82144100
chr2 238804472 238804484 MEF2A JASPAR yes 22242878
chr2 238804472 238804484 MEF2B JASPAR yes 22242879
chr2 238804472 238804484 MEF2D JASPAR yes 22242880
chr2 238804472 238804484 MEF2A JASPAR yes 68303650
chr2 238804472 238804484 MEF2B JASPAR yes 68303651
chr2 238804472 238804484 MEF2D JASPAR yes 68303652
chr2 238804472 238804484 MEF2A JASPAR yes 82144101
chr2 238804472 238804484 MEF2B JASPAR yes 82144102
chr2 238804472 238804484 MEF2D JASPAR yes 82144103
chr2 238804473 238804483 MEF2A JASPAR yes 22242881
chr2 238804473 238804483 MEF2A JASPAR yes 68303653
chr2 238804473 238804483 MEF2A JASPAR yes 82144104
chr2 238804485 238804497 PKNOX1 JASPAR yes 22242882
chr2 238804485 238804497 PKNOX2 JASPAR yes 22242883
chr2 238804485 238804497 TGIF1 JASPAR yes 22242884
chr2 238804485 238804497 TGIF2 JASPAR yes 22242885
chr2 238804485 238804497 PKNOX1 JASPAR yes 68303654
chr2 238804485 238804497 PKNOX2 JASPAR yes 68303655
chr2 238804485 238804497 TGIF1 JASPAR yes 68303656
chr2 238804485 238804497 TGIF2 JASPAR yes 68303657
chr2 238804485 238804497 PKNOX1 JASPAR yes 82144105
chr2 238804485 238804497 PKNOX2 JASPAR yes 82144106
chr2 238804485 238804497 TGIF1 JASPAR yes 82144107
chr2 238804485 238804497 TGIF2 JASPAR yes 82144108
chr2 238804490 238804498 MEIS2 JASPAR yes 22242886
chr2 238804490 238804498 MEIS3 JASPAR yes 22242887
chr2 238804490 238804498 MEIS2 JASPAR yes 68303658
chr2 238804490 238804498 MEIS3 JASPAR yes 68303659
chr2 238804490 238804498 MEIS2 JASPAR yes 82144109
chr2 238804490 238804498 MEIS3 JASPAR yes 82144110
chr2 238804491 238804495 NFE TRANSFAC yes 22242888
chr2 238804491 238804495 NFE TRANSFAC yes 68303660
chr2 238804491 238804495 NFE TRANSFAC yes 82144111
chr2 238804499 238804508 PITX3 JASPAR yes 22242889
chr2 238804499 238804508 PITX3 JASPAR yes 68303661
chr2 238804499 238804508 PITX3 JASPAR yes 82144112
chr2 238804500 238804508 OTX1 JASPAR yes 22242890
chr2 238804500 238804508 OTX2 JASPAR yes 22242891
chr2 238804500 238804508 OTX1 JASPAR yes 68303662
chr2 238804500 238804508 OTX2 JASPAR yes 68303663
chr2 238804500 238804508 OTX1 JASPAR yes 82144113
chr2 238804500 238804508 OTX2 JASPAR yes 82144114
chr2 238804515 238804525 MAX JASPAR yes 22242892
chr2 238804515 238804525 MAX JASPAR yes 68303664
chr2 238804515 238804525 MAX JASPAR yes 82144115
chr2 238804515 238804527 HES5 JASPAR yes 22242893
chr2 238804515 238804527 PKNOX1 JASPAR yes 22242894
chr2 238804515 238804527 PKNOX2 JASPAR yes 22242895
chr2 238804515 238804527 TGIF1 JASPAR yes 22242896
chr2 238804515 238804527 TGIF2 JASPAR yes 22242897
chr2 238804515 238804527 HES5 JASPAR yes 68303665
chr2 238804515 238804527 PKNOX1 JASPAR yes 68303666
chr2 238804515 238804527 PKNOX2 JASPAR yes 68303667
chr2 238804515 238804527 TGIF1 JASPAR yes 68303668
chr2 238804515 238804527 TGIF2 JASPAR yes 68303669
chr2 238804515 238804527 HES5 JASPAR yes 82144116
chr2 238804515 238804527 PKNOX1 JASPAR yes 82144117
chr2 238804515 238804527 PKNOX2 JASPAR yes 82144118
chr2 238804515 238804527 TGIF1 JASPAR yes 82144119
chr2 238804515 238804527 TGIF2 JASPAR yes 82144120
chr2 238804516 238804526 CLOCK JASPAR yes 22242898
chr2 238804516 238804526 NEUROG2 JASPAR yes 22242899
chr2 238804516 238804526 CLOCK JASPAR yes 68303670
chr2 238804516 238804526 NEUROG2 JASPAR yes 68303671
chr2 238804516 238804526 CLOCK JASPAR yes 82144121
chr2 238804516 238804526 NEUROG2 JASPAR yes 82144122
chr2 238804520 238804533 EOMES JASPAR yes 22242900
chr2 238804520 238804533 EOMES JASPAR yes 68303672
chr2 238804520 238804533 EOMES JASPAR yes 82144123
chr2 238804522 238804532 TBR1 JASPAR yes 22242901
chr2 238804522 238804532 TBR1 JASPAR yes 68303673
chr2 238804522 238804532 TBR1 JASPAR yes 82144124
chr2 238804522 238804533 TBX2 JASPAR yes 22242902
chr2 238804522 238804533 TBX2 JASPAR yes 68303674
chr2 238804522 238804533 TBX2 JASPAR yes 82144125
chr2 238804524 238804532 MGA JASPAR yes 22242903
chr2 238804524 238804532 TBX15 JASPAR yes 22242904
chr2 238804524 238804532 TBX1 JASPAR yes 22242905
chr2 238804524 238804532 TBX4 JASPAR yes 22242906
chr2 238804524 238804532 TBX5 JASPAR yes 22242907
chr2 238804524 238804532 MGA JASPAR yes 68303675
chr2 238804524 238804532 TBX15 JASPAR yes 68303676
chr2 238804524 238804532 TBX1 JASPAR yes 68303677
chr2 238804524 238804532 TBX4 JASPAR yes 68303678
chr2 238804524 238804532 TBX5 JASPAR yes 68303679
chr2 238804524 238804532 MGA JASPAR yes 82144126
chr2 238804524 238804532 TBX15 JASPAR yes 82144127
chr2 238804524 238804532 TBX1 JASPAR yes 82144128
chr2 238804524 238804532 TBX4 JASPAR yes 82144129
chr2 238804524 238804532 TBX5 JASPAR yes 82144130
chr2 238804543 238804551 TBX15 JASPAR yes 22242908
chr2 238804543 238804551 TBX15 JASPAR yes 68303680
chr2 238804543 238804551 TBX15 JASPAR yes 82144131
chr2 238804544 238804549 SP1 TRANSFAC yes 22242909
chr2 238804544 238804549 SP1 TRANSFAC yes 68303681
chr2 238804544 238804549 SP1 TRANSFAC yes 82144132
chr2 238804550 238804565 TFAP2A JASPAR yes 22242910
chr2 238804550 238804565 TFAP2C JASPAR yes 22242911
chr2 238804550 238804565 TFAP2A JASPAR yes 68303682
chr2 238804550 238804565 TFAP2C JASPAR yes 68303683
chr2 238804550 238804565 TFAP2A JASPAR yes 82144133
chr2 238804550 238804565 TFAP2C JASPAR yes 82144134
chr2 238804552 238804561 TFAP2A JASPAR yes 22242912
chr2 238804552 238804561 TFAP2A JASPAR yes 68303684
chr2 238804552 238804561 TFAP2A JASPAR yes 82144135
chr2 238804556 238804561 SP1 TRANSFAC yes 22242913
chr2 238804556 238804561 SP1 TRANSFAC yes 68303685
chr2 238804556 238804561 SP1 TRANSFAC yes 82144136
SNP sites on vista35438[chr2:238804450-238804569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238804485 rs35144474 T G
MEF2A MEF2C PKNOX1 PKNOX2 TGIF1 TGIF2
6483911
chr2 238804516 rs567350104 G A
CLOCK HES5 MAX NEUROG2 PKNOX1 PKNOX2 TGIF1 TGIF2
6483912
chr2 238804528 rs140244902 C T
EOMES MGA TBR1 TBX1 TBX15 TBX2 TBX4 TBX5
6483913
Genes possibly regulated by vista35438[chr2:238804450-238804569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238707032 238751451 + RBM44 ENSG00000177483.7 238707032 0.83 0.99 3293 2582
chr2 238767536 238820756 + RAMP1 ENSG00000132329.6 238767536 0.95 1.0 3294 63086
chr2 238875469 238951236 + UBE2F ENSG00000184182.14 238875469 0.65 0.96 3295 29100
chr2 238875656 239008053 + UBE2F-SCLY ENSG00000258984.1 238875656 0.85 0.86 3296 28913
Expression level of Genes
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miRNAs possibly regulated by vista35438[chr2:238804450-238804569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results