EnhancerDB
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  3. vista35440[chr2:238809870-238810202]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35440[chr2:238809870-238810202]
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Tissue distribution of vista35440
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Transcription factor that possibly regulate vista35440[chr2:238809870-238810202]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238809856 238809871 TFAP2C JASPAR yes 22242959
chr2 238809856 238809871 TFAP2C JASPAR yes 82144974
chr2 238809858 238809873 TFAP2A JASPAR yes 22242960
chr2 238809858 238809873 TFAP2A JASPAR yes 82144976
chr2 238809866 238809884 IRF2 JASPAR yes 22242961
chr2 238809866 238809884 IRF2 JASPAR yes 82144977
chr2 238809867 238809888 IRF1 JASPAR yes 22242962
chr2 238809867 238809888 IRF1 JASPAR yes 82144978
chr2 238809868 238809874 LEF1 TRANSFAC yes 22242963
chr2 238809868 238809874 SOX10 JASPAR yes 22242964
chr2 238809868 238809874 LEF1 TRANSFAC yes 82144979
chr2 238809868 238809874 SOX10 JASPAR yes 82144980
chr2 238809869 238809884 STAT2 JASPAR yes 22242965
chr2 238809869 238809884 STAT2 JASPAR yes 82144981
chr2 238809870 238809884 STAT1 JASPAR yes 22242966
chr2 238809870 238809884 STAT1 JASPAR yes 82144982
chr2 238809871 238809883 IRF1 JASPAR yes 22242967
chr2 238809871 238809883 IRF1 JASPAR yes 82144983
chr2 238809871 238809885 IRF7 JASPAR yes 22242968
chr2 238809871 238809885 IRF7 JASPAR yes 82144984
chr2 238809871 238809886 IRF9 JASPAR yes 22242969
chr2 238809871 238809886 IRF9 JASPAR yes 82144985
chr2 238809891 238809909 ESR1 JASPAR yes 22242970
chr2 238809891 238809909 ESR1 JASPAR yes 82144986
chr2 238809892 238809907 ESR2 JASPAR yes 22242971
chr2 238809892 238809907 ESR2 JASPAR yes 82144987
chr2 238809892 238809912 ESR1 JASPAR yes 22242972
chr2 238809892 238809912 ESR1 JASPAR yes 82144988
chr2 238809923 238809944 ZNF263 JASPAR yes 22242973
chr2 238809923 238809944 ZNF263 JASPAR yes 82144989
chr2 238809934 238809944 SP1 JASPAR yes 22242974
chr2 238809934 238809944 SP1 JASPAR yes 82144990
chr2 238809937 238809943 NFE2 TRANSFAC yes 22242975
chr2 238809937 238809943 NFE2 TRANSFAC yes 82144991
chr2 238809988 238809999 USF1 JASPAR yes 22242976
chr2 238809988 238809999 USF2 JASPAR yes 22242977
chr2 238809988 238809999 USF1 JASPAR yes 82144992
chr2 238809988 238809999 USF2 JASPAR yes 82144993
chr2 238809989 238809999 TFEC JASPAR yes 22242978
chr2 238809989 238809999 TFEC JASPAR yes 82144994
chr2 238809995 238810012 BCL6B JASPAR yes 22242979
chr2 238809995 238810012 BCL6B JASPAR yes 82144995
chr2 238810006 238810021 RUNX2 JASPAR yes 22242980
chr2 238810006 238810021 RUNX2 JASPAR yes 82144996
chr2 238810012 238810018 SOX10 JASPAR yes 22242981
chr2 238810012 238810018 SOX10 JASPAR yes 82144997
chr2 238810013 238810025 IRF1 JASPAR yes 22242982
chr2 238810013 238810025 IRF1 JASPAR yes 82144998
chr2 238810018 238810021 MYB TRANSFAC yes 22242983
chr2 238810018 238810021 MYB TRANSFAC yes 82144999
chr2 238810033 238810038 ETS2 TRANSFAC yes 22242984
chr2 238810033 238810038 ETS2 TRANSFAC yes 82145000
chr2 238810034 238810045 NFKB1 JASPAR yes 22242985
chr2 238810034 238810045 NFKB1 JASPAR yes 82145001
chr2 238810035 238810045 NFKB1 JASPAR yes 22242986
chr2 238810035 238810045 RELA JASPAR yes 22242987
chr2 238810035 238810045 REL JASPAR yes 22242988
chr2 238810035 238810045 NFKB1 JASPAR yes 82145002
chr2 238810035 238810045 RELA JASPAR yes 82145003
chr2 238810035 238810045 REL JASPAR yes 82145004
chr2 238810046 238810052 TCF4 TRANSFAC yes 22242989
chr2 238810046 238810052 TCF4 TRANSFAC yes 82145005
chr2 238810052 238810057 TFAP2A TRANSFAC yes 22242990
chr2 238810052 238810057 TFAP2A TRANSFAC yes 82145006
chr2 238810052 238810058 MZF1 JASPAR yes 22242991
chr2 238810052 238810058 MZF1 JASPAR yes 82145007
chr2 238810054 238810059 ETS2 TRANSFAC yes 22242992
chr2 238810054 238810059 ETS2 TRANSFAC yes 82145008
chr2 238810069 238810074 MYB TRANSFAC yes 22242993
chr2 238810069 238810074 MYB TRANSFAC yes 82145009
chr2 238810071 238810086 HSF1 JASPAR yes 22242994
chr2 238810071 238810086 HSF1 JASPAR yes 82145010
chr2 238810072 238810085 HSF1 JASPAR yes 22242995
chr2 238810072 238810085 HSF2 JASPAR yes 22242996
chr2 238810072 238810085 HSF4 JASPAR yes 22242997
chr2 238810072 238810085 HSF1 JASPAR yes 82145011
chr2 238810072 238810085 HSF2 JASPAR yes 82145012
chr2 238810072 238810085 HSF4 JASPAR yes 82145013
chr2 238810095 238810109 CREB3 JASPAR yes 22242998
chr2 238810095 238810109 CREB3L1 JASPAR yes 22242999
chr2 238810095 238810109 CREB3 JASPAR yes 82145014
chr2 238810095 238810109 CREB3L1 JASPAR yes 82145015
chr2 238810096 238810110 XBP1 JASPAR yes 22243000
chr2 238810096 238810110 XBP1 JASPAR yes 82145016
chr2 238810106 238810110 YY1 TRANSFAC yes 22243001
chr2 238810106 238810110 YY1 TRANSFAC yes 82145017
chr2 238810162 238810176 TCF7L2 JASPAR yes 22243002
chr2 238810162 238810176 TCF7L2 JASPAR yes 82145018
chr2 238810170 238810175 ETS2 TRANSFAC yes 22243003
chr2 238810170 238810175 ETS2 TRANSFAC yes 82145019
chr2 238810171 238810186 AR JASPAR yes 22243004
chr2 238810171 238810186 AR JASPAR yes 82145020
chr2 238810171 238810188 NR3C1 JASPAR yes 22243005
chr2 238810171 238810188 NR3C2 JASPAR yes 22243006
chr2 238810171 238810188 NR3C1 JASPAR yes 82145021
chr2 238810171 238810188 NR3C2 JASPAR yes 82145022
chr2 238810179 238810194 HNF4G JASPAR yes 22243007
chr2 238810179 238810194 HNF4G JASPAR yes 82145023
chr2 238810180 238810194 NR2F1 JASPAR yes 22243008
chr2 238810180 238810194 NR2F1 JASPAR yes 82145024
chr2 238810180 238810195 HNF4A JASPAR yes 22243009
chr2 238810180 238810195 HNF4A JASPAR yes 82145025
chr2 238810183 238810189 TCF4 TRANSFAC yes 22243010
chr2 238810183 238810189 TCF4 TRANSFAC yes 82145026
chr2 238810189 238810193 H4TF2 TRANSFAC yes 22243011
chr2 238810189 238810193 H4TF2 TRANSFAC yes 82145027
chr2 238810189 238810204 TFAP2A JASPAR yes 22243012
chr2 238810189 238810204 TFAP2A JASPAR yes 82145028
chr2 238810202 238810218 SOX8 JASPAR yes 22243013
chr2 238810202 238810218 SOX8 JASPAR yes 82145029
SNP sites on vista35440[chr2:238809870-238810202]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238809887 rs150961418 T A
IRF1
6483982
chr2 238809915 rs1867935 G T no 6483983
chr2 238809933 rs141034974 C T
ZNF263
6483984
chr2 238810011 rs543560071 C A
BCL6B RUNX2
6483985
chr2 238810016 rs114124300 A G
IRF1 RUNX2 SOX10
6483986
chr2 238810072 rs146876775 T C
HSF1 HSF2 HSF4 MYB
6483987
chr2 238810102 rs140737766 C T
CREB3 CREB3L1 XBP1
6483988
Genes possibly regulated by vista35440[chr2:238809870-238810202]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238767536 238820756 + RAMP1 ENSG00000132329.6 238767536 0.95 1.0 3294 57666
chr2 238875469 238951236 + UBE2F ENSG00000184182.14 238875469 0.65 0.96 3295 34733
chr2 238875656 239008053 + UBE2F-SCLY ENSG00000258984.1 238875656 0.85 0.86 3296 34546
Expression level of Genes
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miRNAs possibly regulated by vista35440[chr2:238809870-238810202]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results