EnhancerDB
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  3. vista35449[chr2:239050654-239050828]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35449[chr2:239050654-239050828]
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Tissue distribution of vista35449
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Transcription factor that possibly regulate vista35449[chr2:239050654-239050828]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 239050647 239050662 AR JASPAR yes 22243343
chr2 239050647 239050662 AR JASPAR yes 82159188
chr2 239050676 239050693 ZNF410 JASPAR yes 22243344
chr2 239050676 239050693 ZNF410 JASPAR yes 82159189
chr2 239050678 239050688 HOXA13 JASPAR yes 22243345
chr2 239050678 239050688 HOXB13 JASPAR yes 22243346
chr2 239050678 239050688 HOXD13 JASPAR yes 22243347
chr2 239050678 239050688 HOXA13 JASPAR yes 82159190
chr2 239050678 239050688 HOXB13 JASPAR yes 82159191
chr2 239050678 239050688 HOXD13 JASPAR yes 82159192
chr2 239050679 239050688 CDX1 JASPAR yes 22243348
chr2 239050679 239050688 CDX1 JASPAR yes 82159193
chr2 239050691 239050702 ELK4 JASPAR yes 22243349
chr2 239050691 239050702 FLI1 JASPAR yes 22243350
chr2 239050691 239050702 ELK4 JASPAR yes 82159194
chr2 239050691 239050702 FLI1 JASPAR yes 82159195
chr2 239050691 239050704 ELF3 JASPAR yes 22243351
chr2 239050691 239050704 ELF3 JASPAR yes 82159196
chr2 239050692 239050702 ELK1 JASPAR yes 22243352
chr2 239050692 239050702 ELK3 JASPAR yes 22243353
chr2 239050692 239050702 ERF JASPAR yes 22243354
chr2 239050692 239050702 ERG JASPAR yes 22243355
chr2 239050692 239050702 ETS1 JASPAR yes 22243356
chr2 239050692 239050702 ETV1 JASPAR yes 22243357
chr2 239050692 239050702 ETV3 JASPAR yes 22243358
chr2 239050692 239050702 ETV4 JASPAR yes 22243359
chr2 239050692 239050702 ETV6 JASPAR yes 22243360
chr2 239050692 239050702 FEV JASPAR yes 22243361
chr2 239050692 239050702 FLI1 JASPAR yes 22243362
chr2 239050692 239050702 ELK1 JASPAR yes 82159197
chr2 239050692 239050702 ELK3 JASPAR yes 82159198
chr2 239050692 239050702 ERF JASPAR yes 82159199
chr2 239050692 239050702 ERG JASPAR yes 82159200
chr2 239050692 239050702 ETS1 JASPAR yes 82159201
chr2 239050692 239050702 ETV1 JASPAR yes 82159202
chr2 239050692 239050702 ETV3 JASPAR yes 82159203
chr2 239050692 239050702 ETV4 JASPAR yes 82159204
chr2 239050692 239050702 ETV6 JASPAR yes 82159205
chr2 239050692 239050702 FEV JASPAR yes 82159206
chr2 239050692 239050702 FLI1 JASPAR yes 82159207
chr2 239050692 239050703 ELF5 JASPAR yes 22243363
chr2 239050692 239050703 ETV2 JASPAR yes 22243364
chr2 239050692 239050703 SPDEF JASPAR yes 22243365
chr2 239050692 239050703 ELF5 JASPAR yes 82159208
chr2 239050692 239050703 ETV2 JASPAR yes 82159209
chr2 239050692 239050703 SPDEF JASPAR yes 82159210
chr2 239050692 239050704 EHF JASPAR yes 22243366
chr2 239050692 239050704 ELF1 JASPAR yes 22243367
chr2 239050692 239050704 ELF4 JASPAR yes 22243368
chr2 239050692 239050704 EHF JASPAR yes 82159211
chr2 239050692 239050704 ELF1 JASPAR yes 82159212
chr2 239050692 239050704 ELF4 JASPAR yes 82159213
chr2 239050692 239050705 ELF1 JASPAR yes 22243369
chr2 239050692 239050705 ELF1 JASPAR yes 82159214
chr2 239050692 239050706 SPI1 JASPAR yes 22243370
chr2 239050692 239050706 SPIC JASPAR yes 22243371
chr2 239050692 239050706 SPI1 JASPAR yes 82159215
chr2 239050692 239050706 SPIC JASPAR yes 82159216
chr2 239050693 239050700 SPI1 JASPAR yes 22243372
chr2 239050693 239050700 SPI1 JASPAR yes 82159217
chr2 239050693 239050701 EHF JASPAR yes 22243373
chr2 239050693 239050701 FEV JASPAR yes 22243374
chr2 239050693 239050701 EHF JASPAR yes 82159218
chr2 239050693 239050701 FEV JASPAR yes 82159219
chr2 239050697 239050712 TP53 JASPAR yes 22243375
chr2 239050697 239050712 TP53 JASPAR yes 82159220
chr2 239050705 239050714 THAP1 JASPAR yes 22243376
chr2 239050705 239050714 THAP1 JASPAR yes 82159221
chr2 239050707 239050721 TLX1 JASPAR yes 22243377
chr2 239050707 239050721 TLX1 JASPAR yes 82159222
chr2 239050708 239050722 TLX1 JASPAR yes 22243378
chr2 239050708 239050722 TLX1 JASPAR yes 82159223
chr2 239050716 239050729 TFAP2A JASPAR yes 22243379
chr2 239050716 239050729 TFAP2B JASPAR yes 22243380
chr2 239050716 239050729 TFAP2C JASPAR yes 22243381
chr2 239050716 239050729 TFAP2A JASPAR yes 82159224
chr2 239050716 239050729 TFAP2B JASPAR yes 82159225
chr2 239050716 239050729 TFAP2C JASPAR yes 82159226
chr2 239050724 239050744 TP63 JASPAR yes 22243382
chr2 239050724 239050744 TP63 JASPAR yes 82159227
chr2 239050725 239050743 TP53 JASPAR yes 22243383
chr2 239050725 239050743 TP53 JASPAR yes 82159228
chr2 239050734 239050738 ESR1 TRANSFAC yes 22243384
chr2 239050734 239050738 ESR1 TRANSFAC yes 82159229
chr2 239050736 239050749 ATF4 JASPAR yes 22243385
chr2 239050736 239050749 ATF4 JASPAR yes 82159230
chr2 239050746 239050754 MEIS2 JASPAR yes 22243386
chr2 239050746 239050754 MEIS3 JASPAR yes 22243387
chr2 239050746 239050754 MEIS2 JASPAR yes 82159231
chr2 239050746 239050754 MEIS3 JASPAR yes 82159232
chr2 239050771 239050775 ESR1 TRANSFAC yes 22243388
chr2 239050771 239050775 ESR1 TRANSFAC yes 82159233
chr2 239050782 239050786 LFA1 TRANSFAC yes 22243389
chr2 239050782 239050786 LFA1 TRANSFAC yes 82159234
chr2 239050796 239050801 SP1 TRANSFAC yes 22243390
chr2 239050796 239050801 SP1 TRANSFAC yes 82159235
chr2 239050799 239050818 PAX5 JASPAR yes 22243391
chr2 239050799 239050818 PAX5 JASPAR yes 82159236
chr2 239050800 239050815 TFAP2A JASPAR yes 22243392
chr2 239050800 239050815 TFAP2C JASPAR yes 22243393
chr2 239050800 239050815 TFAP2A JASPAR yes 82159237
chr2 239050800 239050815 TFAP2C JASPAR yes 82159238
chr2 239050803 239050815 TFAP2A JASPAR yes 22243394
chr2 239050803 239050815 TFAP2A JASPAR yes 82159239
chr2 239050810 239050814 LFA1 TRANSFAC yes 22243395
chr2 239050810 239050814 LFA1 TRANSFAC yes 82159240
SNP sites on vista35449[chr2:239050654-239050828]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 239050738 rs180777456 C T
ATF4 ESR1 TP53 TP63
6485441
chr2 239050809 rs753862 C T
PAX5 TFAP2A TFAP2C
6485442
Genes possibly regulated by vista35449[chr2:239050654-239050828]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238969530 239008054 + SCLY ENSG00000132330.12 238969530 0.78 0.94 3297 18876
chr2 239008798 239041928 + ESPNL ENSG00000144488.10 239008798 0.82 0.97 3298 58144
chr2 239047363 239061588 + KLHL30 ENSG00000168427.7 239047363 0.93 1.0 3299 96709
chr2 239067623 239077541 + FAM132B ENSG00000178752.11 239067623 0.92 1.0 3300 83205
chr2 239079042 239112370 - ILKAP ENSG00000132323.4 239112370 0.53 1.0 3301 38458
chr2 239133193 239140318 - AC016757.3 ENSG00000186235.6 239140318 0.78 1.0 3302 10510
chr2 239146908 239149303 - HES6 ENSG00000144485.6 239149303 0.85 1.0 3303 1525
Expression level of Genes
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miRNAs possibly regulated by vista35449[chr2:239050654-239050828]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results