EnhancerDB
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  3. vista35455[chr2:239194414-239194788]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35455[chr2:239194414-239194788]
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Tissue distribution of vista35455
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Transcription factor that possibly regulate vista35455[chr2:239194414-239194788]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 239194208 239199355 POLR2A UCSC Txn Factor no Conserved 108435962
chr2 239194320 239194756 ELF1 UCSC Txn Factor no Conserved 108435963
chr2 239194332 239194636 NR3C1 UCSC Txn Factor no Conserved 108435964
chr2 239194458 239194738 FOXA1 UCSC Txn Factor no Conserved 108435965
chr2 239194484 239194720 FOXA2 UCSC Txn Factor no Conserved 108435966
chr2 239194488 239194714 CEBPB UCSC Txn Factor no Conserved 108435967
chr2 239194516 239194687 MXI1 UCSC Txn Factor no Conserved 108435968
chr2 239194591 239194708 SRF UCSC Txn Factor no Conserved 108435969
chr2 239194421 239194435 SPIC JASPAR yes 22243545
chr2 239194421 239194435 SPIC JASPAR yes 82161100
chr2 239194436 239194448 POU3F1 JASPAR yes 22243546
chr2 239194436 239194448 POU3F2 JASPAR yes 22243547
chr2 239194436 239194448 POU3F1 JASPAR yes 82161101
chr2 239194436 239194448 POU3F2 JASPAR yes 82161102
chr2 239194436 239194449 POU3F3 JASPAR yes 22243548
chr2 239194436 239194449 POU3F3 JASPAR yes 82161103
chr2 239194437 239194449 POU2F1 JASPAR yes 22243549
chr2 239194437 239194449 POU2F1 JASPAR yes 82161104
chr2 239194438 239194450 DBP JASPAR yes 22243550
chr2 239194438 239194450 HLF JASPAR yes 22243551
chr2 239194438 239194450 DBP JASPAR yes 82161105
chr2 239194438 239194450 HLF JASPAR yes 82161106
chr2 239194439 239194447 FOXL1 JASPAR yes 22243552
chr2 239194439 239194447 FOXL1 JASPAR yes 82161107
chr2 239194440 239194451 NFIL3 JASPAR yes 22243553
chr2 239194440 239194451 NFIL3 JASPAR yes 82161108
chr2 239194456 239194471 AR JASPAR yes 22243554
chr2 239194456 239194471 AR JASPAR yes 82161109
chr2 239194468 239194472 NFE TRANSFAC yes 22243555
chr2 239194468 239194472 NFE TRANSFAC yes 82161110
chr2 239194490 239194500 HOXD11 JASPAR yes 22243556
chr2 239194490 239194500 HOXD11 JASPAR yes 82161111
chr2 239194490 239194501 HOXC11 JASPAR yes 22243557
chr2 239194490 239194501 HOXC12 JASPAR yes 22243558
chr2 239194490 239194501 HOXC13 JASPAR yes 22243559
chr2 239194490 239194501 HOXC11 JASPAR yes 82161112
chr2 239194490 239194501 HOXC12 JASPAR yes 82161113
chr2 239194490 239194501 HOXC13 JASPAR yes 82161114
chr2 239194510 239194522 GRHL1 JASPAR yes 22243560
chr2 239194510 239194522 GRHL1 JASPAR yes 82161115
chr2 239194511 239194514 MYB TRANSFAC yes 22243561
chr2 239194511 239194514 MYB TRANSFAC yes 82161116
chr2 239194522 239194533 ELK4 JASPAR yes 22243562
chr2 239194522 239194533 FLI1 JASPAR yes 22243563
chr2 239194522 239194533 ELK4 JASPAR yes 82161117
chr2 239194522 239194533 FLI1 JASPAR yes 82161118
chr2 239194522 239194535 ELF3 JASPAR yes 22243564
chr2 239194522 239194535 ELF3 JASPAR yes 82161119
chr2 239194523 239194533 ETV6 JASPAR yes 22243565
chr2 239194523 239194533 ETV6 JASPAR yes 82161120
chr2 239194523 239194534 ELF5 JASPAR yes 22243566
chr2 239194523 239194534 SPDEF JASPAR yes 22243567
chr2 239194523 239194534 ELF5 JASPAR yes 82161121
chr2 239194523 239194534 SPDEF JASPAR yes 82161122
chr2 239194523 239194535 EHF JASPAR yes 22243568
chr2 239194523 239194535 ELF1 JASPAR yes 22243569
chr2 239194523 239194535 ELF4 JASPAR yes 22243570
chr2 239194523 239194535 EHF JASPAR yes 82161123
chr2 239194523 239194535 ELF1 JASPAR yes 82161124
chr2 239194523 239194535 ELF4 JASPAR yes 82161125
chr2 239194523 239194536 ELF1 JASPAR yes 22243571
chr2 239194523 239194536 ELF1 JASPAR yes 82161126
chr2 239194524 239194531 SPI1 JASPAR yes 22243572
chr2 239194524 239194531 SPI1 JASPAR yes 82161127
chr2 239194524 239194532 EHF JASPAR yes 22243573
chr2 239194524 239194532 FEV JASPAR yes 22243574
chr2 239194524 239194532 EHF JASPAR yes 82161128
chr2 239194524 239194532 FEV JASPAR yes 82161129
chr2 239194541 239194556 TFAP2A JASPAR yes 22243575
chr2 239194541 239194556 TFAP2C JASPAR yes 22243576
chr2 239194541 239194556 TFAP2A JASPAR yes 82161130
chr2 239194541 239194556 TFAP2C JASPAR yes 82161131
chr2 239194543 239194558 TFAP2C JASPAR yes 22243577
chr2 239194543 239194558 TFAP2C JASPAR yes 82161132
chr2 239194544 239194555 TFAP2A JASPAR yes 22243578
chr2 239194544 239194555 TFAP2A JASPAR yes 82161133
chr2 239194563 239194580 BCL6B JASPAR yes 22243579
chr2 239194563 239194580 BCL6B JASPAR yes 82161134
chr2 239194578 239194589 FOXA1 JASPAR yes 22243580
chr2 239194578 239194589 FOXA1 JASPAR yes 82161135
chr2 239194589 239194600 FOXA1 JASPAR yes 22243581
chr2 239194589 239194600 FOXH1 JASPAR yes 22243582
chr2 239194589 239194600 FOXA1 JASPAR yes 82161136
chr2 239194589 239194600 FOXH1 JASPAR yes 82161137
chr2 239194589 239194604 FOXA1 JASPAR yes 22243583
chr2 239194589 239194604 FOXA1 JASPAR yes 82161138
chr2 239194590 239194601 FOXC1 JASPAR yes 22243584
chr2 239194590 239194601 FOXC1 JASPAR yes 82161139
chr2 239194590 239194602 FOXC2 JASPAR yes 22243585
chr2 239194590 239194602 FOXC2 JASPAR yes 82161140
chr2 239194591 239194602 FOXP2 JASPAR yes 22243586
chr2 239194591 239194602 FOXP2 JASPAR yes 82161141
chr2 239194591 239194603 FOXI1 JASPAR yes 22243587
chr2 239194591 239194603 FOXI1 JASPAR yes 82161142
chr2 239194605 239194621 RFX2 JASPAR yes 22243588
chr2 239194605 239194621 RFX3 JASPAR yes 22243589
chr2 239194605 239194621 RFX5 JASPAR yes 22243590
chr2 239194605 239194621 RFX2 JASPAR yes 82161143
chr2 239194605 239194621 RFX3 JASPAR yes 82161144
chr2 239194605 239194621 RFX5 JASPAR yes 82161145
chr2 239194606 239194625 RFX2 JASPAR yes 22243591
chr2 239194606 239194625 RFX2 JASPAR yes 82161146
chr2 239194627 239194630 MYB TRANSFAC yes 22243592
chr2 239194627 239194630 MYB TRANSFAC yes 82161147
chr2 239194642 239194654 INSM1 JASPAR yes 22243593
chr2 239194642 239194654 INSM1 JASPAR yes 82161148
chr2 239194650 239194656 YY1 JASPAR yes 22243594
chr2 239194650 239194656 YY1 JASPAR yes 82161149
chr2 239194650 239194668 SRF JASPAR yes 22243595
chr2 239194650 239194668 SRF JASPAR yes 82161150
chr2 239194652 239194668 SRF JASPAR yes 22243596
chr2 239194652 239194668 SRF JASPAR yes 82161151
chr2 239194653 239194665 SRF JASPAR yes 22243597
chr2 239194653 239194665 SRF JASPAR yes 82161152
chr2 239194655 239194667 SRF JASPAR yes 22243598
chr2 239194655 239194667 SRF JASPAR yes 82161153
chr2 239194662 239194673 E2F6 JASPAR yes 22243599
chr2 239194662 239194673 E2F6 JASPAR yes 82161154
chr2 239194666 239194671 ETS2 TRANSFAC yes 22243600
chr2 239194666 239194671 ETS2 TRANSFAC yes 82161155
chr2 239194668 239194689 ZNF263 JASPAR yes 22243601
chr2 239194668 239194689 ZNF263 JASPAR yes 82161156
chr2 239194695 239194702 E2F1 TRANSFAC yes 22243602
chr2 239194695 239194702 E2F1 TRANSFAC yes 82161157
chr2 239194749 239194753 YY1 TRANSFAC yes 22243603
chr2 239194749 239194753 YY1 TRANSFAC yes 82161158
chr2 239194771 239194782 FOXA1 JASPAR yes 22243604
chr2 239194771 239194782 FOXA1 JASPAR yes 82161159
chr2 239194771 239194786 FOXA1 JASPAR yes 22243605
chr2 239194771 239194786 FOXA1 JASPAR yes 82161160
chr2 239194772 239194783 FOXC1 JASPAR yes 22243606
chr2 239194772 239194783 FOXC1 JASPAR yes 82161161
chr2 239194772 239194784 FOXC2 JASPAR yes 22243607
chr2 239194772 239194784 FOXC2 JASPAR yes 82161162
SNP sites on vista35455[chr2:239194414-239194788]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 239194436 rs11893328 G A
ELF1 NR3C1 POLR2A POU3F1 POU3F2 POU3F3
6485717
chr2 239194516 rs141930208 A G
CEBPB ELF1 FOXA1 FOXA2 GRHL1 MXI1 NR3C1 POLR2A
6485718
chr2 239194669 rs76889939 G A
CEBPB E2F6 ELF1 ETS2 FOXA1 FOXA2 MXI1 POLR2A SRF ZNF263
6485719
chr2 239194693 rs77942338 T C
CEBPB ELF1 FOXA1 FOXA2 POLR2A SRF
6485720
Genes possibly regulated by vista35455[chr2:239194414-239194788]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239079042 239112370 - ILKAP ENSG00000132323.4 239112370 0.53 1.0 3301 17956
chr2 239133193 239140318 - AC016757.3 ENSG00000186235.6 239140318 0.78 1.0 3302 45904
chr2 239146908 239149303 - HES6 ENSG00000144485.6 239149303 0.85 1.0 3303 54889
chr2 239152679 239198743 - PER2 ENSG00000132326.7 239198743 0.63 1.0 3304 96045
chr2 239192329 239192498 + AC012485.1 ENSG00000268396.1 239192329 0.0 1.0 3305 97915
chr2 239229082 239309541 + TRAF3IP1 ENSG00000204104.7 239229082 0.66 1.0 3306 65706
Expression level of Genes
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miRNAs possibly regulated by vista35455[chr2:239194414-239194788]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results