EnhancerDB
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  3. vista35461[chr2:239417618-239418019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35461[chr2:239417618-239418019]
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Tissue distribution of vista35461
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Transcription factor that possibly regulate vista35461[chr2:239417618-239418019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 239417598 239417618 RREB1 JASPAR yes 22243869
chr2 239417598 239417618 RREB1 JASPAR yes 82173756
chr2 239417600 239417620 RREB1 JASPAR yes 22243870
chr2 239417600 239417620 RREB1 JASPAR yes 82173757
chr2 239417602 239417622 RREB1 JASPAR yes 22243871
chr2 239417602 239417622 RREB1 JASPAR yes 82173758
chr2 239417604 239417624 RREB1 JASPAR yes 22243872
chr2 239417604 239417624 RREB1 JASPAR yes 82173759
chr2 239417606 239417626 RREB1 JASPAR yes 22243873
chr2 239417606 239417626 RREB1 JASPAR yes 82173760
chr2 239417608 239417628 RREB1 JASPAR yes 22243874
chr2 239417608 239417628 RREB1 JASPAR yes 82173761
chr2 239417610 239417630 RREB1 JASPAR yes 22243875
chr2 239417610 239417630 RREB1 JASPAR yes 82173762
chr2 239417612 239417632 RREB1 JASPAR yes 22243876
chr2 239417612 239417632 RREB1 JASPAR yes 82173763
chr2 239417614 239417634 RREB1 JASPAR yes 22243877
chr2 239417614 239417634 RREB1 JASPAR yes 82173764
chr2 239417616 239417631 RUNX2 JASPAR yes 22243878
chr2 239417616 239417631 RUNX2 JASPAR yes 82173765
chr2 239417626 239417631 SP1 TRANSFAC yes 22243879
chr2 239417626 239417631 SP1 TRANSFAC yes 82173766
chr2 239417649 239417652 MYB TRANSFAC yes 22243880
chr2 239417649 239417652 MYB TRANSFAC yes 82173767
chr2 239417676 239417691 MEF2A JASPAR yes 22243881
chr2 239417676 239417691 MEF2A JASPAR yes 82173768
chr2 239417677 239417692 MEF2C JASPAR yes 22243882
chr2 239417677 239417692 MEF2C JASPAR yes 82173769
chr2 239417682 239417686 YY1 TRANSFAC yes 22243883
chr2 239417682 239417686 YY1 TRANSFAC yes 82173770
chr2 239417702 239417709 NKX3-1 JASPAR yes 22243884
chr2 239417702 239417709 NKX3-1 JASPAR yes 82173771
chr2 239417726 239417730 LFA1 TRANSFAC yes 22243885
chr2 239417726 239417730 LFA1 TRANSFAC yes 82173772
chr2 239417730 239417737 NKX3-1 JASPAR yes 22243886
chr2 239417730 239417737 NKX3-1 JASPAR yes 82173773
chr2 239417740 239417746 TBP TRANSFAC yes 22243887
chr2 239417740 239417746 TBP TRANSFAC yes 82173774
chr2 239417753 239417765 FOXC2 JASPAR yes 22243888
chr2 239417753 239417765 FOXC2 JASPAR yes 82173775
chr2 239417763 239417774 FOXH1 JASPAR yes 22243889
chr2 239417763 239417774 FOXH1 JASPAR yes 82173776
chr2 239417767 239417773 ZNF354C JASPAR yes 22243890
chr2 239417767 239417773 ZNF354C JASPAR yes 82173777
chr2 239417770 239417782 TEAD1 JASPAR yes 22243891
chr2 239417770 239417782 TEAD1 JASPAR yes 82173778
chr2 239417772 239417776 YY1 TRANSFAC yes 22243892
chr2 239417772 239417776 YY1 TRANSFAC yes 82173779
chr2 239417782 239417786 H4TF2 TRANSFAC yes 22243893
chr2 239417782 239417786 H4TF2 TRANSFAC yes 82173780
chr2 239417782 239417799 RARA JASPAR yes 22243894
chr2 239417782 239417799 RARA JASPAR yes 82173781
chr2 239417825 239417840 TFAP2A JASPAR yes 22243895
chr2 239417825 239417840 TFAP2C JASPAR yes 22243896
chr2 239417825 239417840 TFAP2A JASPAR yes 82173782
chr2 239417825 239417840 TFAP2C JASPAR yes 82173783
chr2 239417847 239417868 REST JASPAR yes 22243897
chr2 239417847 239417868 REST JASPAR yes 82173784
chr2 239417848 239417867 REST JASPAR yes 22243898
chr2 239417848 239417867 REST JASPAR yes 82173785
chr2 239417853 239417868 TFAP2C JASPAR yes 22243899
chr2 239417853 239417868 TFAP2C JASPAR yes 82173786
chr2 239417854 239417865 TFAP2A JASPAR yes 22243900
chr2 239417854 239417865 TFAP2B JASPAR yes 22243901
chr2 239417854 239417865 TFAP2C JASPAR yes 22243902
chr2 239417854 239417865 TFAP2A JASPAR yes 82173787
chr2 239417854 239417865 TFAP2B JASPAR yes 82173788
chr2 239417854 239417865 TFAP2C JASPAR yes 82173789
chr2 239417854 239417866 INSM1 JASPAR yes 22243903
chr2 239417854 239417866 INSM1 JASPAR yes 82173790
chr2 239417855 239417864 TFAP2A JASPAR yes 22243904
chr2 239417855 239417864 TFAP2A JASPAR yes 82173791
chr2 239417899 239417904 ETS2 TRANSFAC yes 22243905
chr2 239417899 239417904 ETS2 TRANSFAC yes 82173792
chr2 239417915 239417929 JUN JASPAR yes 22243906
chr2 239417915 239417929 JUN JASPAR yes 82173793
chr2 239417917 239417928 BATF JASPAR yes 22243907
chr2 239417917 239417928 BATF JASPAR yes 82173794
chr2 239417918 239417929 JUNB JASPAR yes 22243908
chr2 239417918 239417929 JUNB JASPAR yes 82173795
chr2 239417919 239417930 FOS JASPAR yes 22243909
chr2 239417919 239417930 FOSL1 JASPAR yes 22243910
chr2 239417919 239417930 JUND JASPAR yes 22243911
chr2 239417919 239417930 FOS JASPAR yes 82173796
chr2 239417919 239417930 FOSL1 JASPAR yes 82173797
chr2 239417919 239417930 JUND JASPAR yes 82173798
chr2 239417920 239417931 FOSL2 JASPAR yes 22243912
chr2 239417920 239417931 JUNB JASPAR yes 22243913
chr2 239417920 239417931 NFE2L2 JASPAR yes 22243914
chr2 239417920 239417931 FOSL2 JASPAR yes 82173799
chr2 239417920 239417931 JUNB JASPAR yes 82173800
chr2 239417920 239417931 NFE2L2 JASPAR yes 82173801
chr2 239417920 239417934 JUN JASPAR yes 22243915
chr2 239417920 239417934 JUN JASPAR yes 82173802
chr2 239417921 239417932 BATF JASPAR yes 22243916
chr2 239417921 239417932 BATF JASPAR yes 82173803
chr2 239417928 239417937 TFAP2A JASPAR yes 22243917
chr2 239417928 239417937 TFAP2A JASPAR yes 82173804
chr2 239417928 239417939 EBF1 JASPAR yes 22243918
chr2 239417928 239417939 EBF1 JASPAR yes 82173805
chr2 239417932 239417937 TFAP2A TRANSFAC yes 22243919
chr2 239417932 239417937 TFAP2A TRANSFAC yes 82173806
chr2 239417932 239417938 MZF1 JASPAR yes 22243920
chr2 239417932 239417938 MZF1 JASPAR yes 82173807
chr2 239417941 239417953 TEAD1 JASPAR yes 22243921
chr2 239417941 239417953 TEAD1 JASPAR yes 82173808
chr2 239417953 239417963 GCM2 JASPAR yes 22243922
chr2 239417953 239417963 GCM2 JASPAR yes 82173809
chr2 239417981 239417996 FOXA1 JASPAR yes 22243923
chr2 239417981 239417996 FOXA1 JASPAR yes 82173810
chr2 239417982 239417997 FOXP1 JASPAR yes 22243924
chr2 239417982 239417997 FOXP1 JASPAR yes 82173811
chr2 239417983 239417994 FOXP2 JASPAR yes 22243925
chr2 239417983 239417994 FOXP2 JASPAR yes 82173812
chr2 239417983 239417995 FOXC2 JASPAR yes 22243926
chr2 239417983 239417995 FOXC2 JASPAR yes 82173813
chr2 239417983 239417997 FOXF2 JASPAR yes 22243927
chr2 239417983 239417997 FOXF2 JASPAR yes 82173814
chr2 239417984 239417992 FOXD1 JASPAR yes 22243928
chr2 239417984 239417992 FOXO3 JASPAR yes 22243929
chr2 239417984 239417992 FOXD1 JASPAR yes 82173815
chr2 239417984 239417992 FOXO3 JASPAR yes 82173816
chr2 239417985 239417992 FOXD2 JASPAR yes 22243930
chr2 239417985 239417992 FOXI1 JASPAR yes 22243931
chr2 239417985 239417992 FOXL1 JASPAR yes 22243932
chr2 239417985 239417992 FOXO4 JASPAR yes 22243933
chr2 239417985 239417992 FOXO6 JASPAR yes 22243934
chr2 239417985 239417992 FOXP3 JASPAR yes 22243935
chr2 239417985 239417992 FOXD2 JASPAR yes 82173817
chr2 239417985 239417992 FOXI1 JASPAR yes 82173818
chr2 239417985 239417992 FOXL1 JASPAR yes 82173819
chr2 239417985 239417992 FOXO4 JASPAR yes 82173820
chr2 239417985 239417992 FOXO6 JASPAR yes 82173821
chr2 239417985 239417992 FOXP3 JASPAR yes 82173822
chr2 239417985 239417996 FOXA1 JASPAR yes 22243936
chr2 239417985 239417996 FOXA1 JASPAR yes 82173823
chr2 239418002 239418006 NFE TRANSFAC yes 22243937
chr2 239418002 239418006 NFE TRANSFAC yes 82173824
chr2 239418017 239418035 ESR2 JASPAR yes 22243938
chr2 239418017 239418035 ESR2 JASPAR yes 82173825
SNP sites on vista35461[chr2:239417618-239418019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 239417627 rs553120272 G T
RREB1 RUNX2 SP1
6487114
chr2 239417796 rs67901976 A G
RARA
6487115
chr2 239417840 rs28497373 A G
TFAP2A TFAP2C
6487116
chr2 239417852 rs113074163 C T
REST
6487117
chr2 239417965 rs184673364 G A no 6487118
chr2 239417989 rs530931565 TTACTC T
FOXA1 FOXC2 FOXD1 FOXD2 FOXF2 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3
6487119
Genes possibly regulated by vista35461[chr2:239417618-239418019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239335383 239360891 + ASB1 ENSG00000065802.7 239335383 0.6 1.0 3307 17765
Expression level of Genes
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miRNAs possibly regulated by vista35461[chr2:239417618-239418019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results