EnhancerDB
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  3. vista35478[chr2:239772979-239773251]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35478[chr2:239772979-239773251]
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Tissue distribution of vista35478
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Transcription factor that possibly regulate vista35478[chr2:239772979-239773251]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 239772748 239773384 TCF7L2 UCSC Txn Factor no Conserved 108435990
chr2 239772842 239773262 EP300 UCSC Txn Factor no Conserved 108435991
chr2 239772859 239773206 JUND UCSC Txn Factor no Conserved 108435992
chr2 239772872 239773204 FOSL2 UCSC Txn Factor no Conserved 108435993
chr2 239772893 239773177 FOS UCSC Txn Factor no Conserved 108435994
chr2 239772951 239773211 FOXA1 UCSC Txn Factor no Conserved 108435995
chr2 239772970 239773186 FOXA2 UCSC Txn Factor no Conserved 108435996
chr2 239773025 239773621 TFAP2C UCSC Txn Factor no Conserved 108435997
chr2 239772980 239772995 MYBL2 JASPAR yes 22244455
chr2 239772980 239772995 MYBL2 JASPAR yes 82193583
chr2 239772982 239772994 MYBL1 JASPAR yes 22244456
chr2 239772982 239772994 MYBL1 JASPAR yes 82193584
chr2 239772987 239772990 MYB TRANSFAC yes 22244457
chr2 239772987 239772990 MYB TRANSFAC yes 82193585
chr2 239773002 239773021 REST JASPAR yes 22244458
chr2 239773002 239773021 REST JASPAR yes 82193586
chr2 239773004 239773010 SP1 TRANSFAC yes 22244459
chr2 239773004 239773010 SP1 TRANSFAC yes 82193587
chr2 239773023 239773034 FOS JASPAR yes 22244460
chr2 239773023 239773034 JUND JASPAR yes 22244461
chr2 239773023 239773034 FOS JASPAR yes 82193588
chr2 239773023 239773034 JUND JASPAR yes 82193589
chr2 239773025 239773031 JUN TRANSFAC yes 22244462
chr2 239773025 239773031 JUN TRANSFAC yes 82193590
chr2 239773046 239773060 JUN JASPAR yes 22244463
chr2 239773046 239773060 JUN JASPAR yes 82193591
chr2 239773049 239773060 FOSL2 JASPAR yes 22244464
chr2 239773049 239773060 JUNB JASPAR yes 22244465
chr2 239773049 239773060 FOSL2 JASPAR yes 82193592
chr2 239773049 239773060 JUNB JASPAR yes 82193593
chr2 239773050 239773061 FOS JASPAR yes 22244466
chr2 239773050 239773061 FOSL1 JASPAR yes 22244467
chr2 239773050 239773061 JUND JASPAR yes 22244468
chr2 239773050 239773061 FOS JASPAR yes 82193594
chr2 239773050 239773061 FOSL1 JASPAR yes 82193595
chr2 239773050 239773061 JUND JASPAR yes 82193596
chr2 239773051 239773058 JUN TRANSFAC yes 22244469
chr2 239773051 239773058 JUN TRANSFAC yes 82193597
chr2 239773052 239773063 BATF JASPAR yes 22244470
chr2 239773052 239773063 BATF JASPAR yes 82193598
chr2 239773083 239773094 FOXA1 JASPAR yes 22244471
chr2 239773083 239773094 FOXA1 JASPAR yes 82193599
chr2 239773083 239773098 FOXA1 JASPAR yes 22244472
chr2 239773083 239773098 FOXA1 JASPAR yes 82193600
chr2 239773084 239773096 FOXC2 JASPAR yes 22244473
chr2 239773084 239773096 FOXC2 JASPAR yes 82193601
chr2 239773086 239773100 FOXF2 JASPAR yes 22244474
chr2 239773086 239773100 FOXF2 JASPAR yes 82193602
chr2 239773086 239773101 FOXP1 JASPAR yes 22244475
chr2 239773086 239773101 FOXP1 JASPAR yes 82193603
chr2 239773089 239773100 FOXP2 JASPAR yes 22244476
chr2 239773089 239773100 FOXP2 JASPAR yes 82193604
chr2 239773101 239773109 EHF JASPAR yes 22244477
chr2 239773101 239773109 EHF JASPAR yes 82193605
chr2 239773121 239773136 TFAP2A JASPAR yes 22244478
chr2 239773121 239773136 TFAP2C JASPAR yes 22244479
chr2 239773121 239773136 TFAP2A JASPAR yes 82193606
chr2 239773121 239773136 TFAP2C JASPAR yes 82193607
chr2 239773125 239773140 HNF4G JASPAR yes 22244480
chr2 239773125 239773140 HNF4G JASPAR yes 82193608
chr2 239773126 239773141 HNF4A JASPAR yes 22244481
chr2 239773126 239773141 HNF4A JASPAR yes 82193609
chr2 239773147 239773152 SP1 TRANSFAC yes 22244482
chr2 239773147 239773152 SP1 TRANSFAC yes 82193610
chr2 239773172 239773186 PLAG1 JASPAR yes 22244483
chr2 239773172 239773186 PLAG1 JASPAR yes 82193611
chr2 239773178 239773193 TFAP2A JASPAR yes 22244484
chr2 239773178 239773193 TFAP2C JASPAR yes 22244485
chr2 239773178 239773193 TFAP2A JASPAR yes 82193612
chr2 239773178 239773193 TFAP2C JASPAR yes 82193613
chr2 239773178 239773197 REST JASPAR yes 22244486
chr2 239773178 239773197 REST JASPAR yes 82193614
chr2 239773180 239773195 TFAP2A JASPAR yes 22244487
chr2 239773180 239773195 TFAP2A JASPAR yes 82193615
chr2 239773182 239773191 TFAP2A JASPAR yes 22244488
chr2 239773182 239773191 TFAP2A JASPAR yes 82193616
chr2 239773193 239773197 ESR1 TRANSFAC yes 22244489
chr2 239773193 239773197 ESR1 TRANSFAC yes 82193617
chr2 239773201 239773206 TFAP2A TRANSFAC yes 22244490
chr2 239773201 239773206 TFAP2A TRANSFAC yes 82193618
chr2 239773201 239773207 MZF1 JASPAR yes 22244491
chr2 239773201 239773207 MZF1 JASPAR yes 82193619
chr2 239773201 239773211 SP1 JASPAR yes 22244492
chr2 239773201 239773211 SP1 JASPAR yes 82193620
chr2 239773201 239773222 ZNF263 JASPAR yes 22244493
chr2 239773201 239773222 ZNF263 JASPAR yes 82193621
chr2 239773202 239773211 SP1 TRANSFAC yes 22244494
chr2 239773202 239773211 SP1 TRANSFAC yes 82193622
chr2 239773203 239773209 MAZ TRANSFAC yes 22244495
chr2 239773203 239773209 MAZ TRANSFAC yes 82193623
chr2 239773204 239773214 MZF1 JASPAR yes 22244496
chr2 239773204 239773214 MZF1 JASPAR yes 82193624
chr2 239773219 239773223 LFA1 TRANSFAC yes 22244497
chr2 239773219 239773223 LFA1 TRANSFAC yes 82193625
SNP sites on vista35478[chr2:239772979-239773251]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 239772983 rs141383935 G C
EP300 FOS FOSL2 FOXA1 FOXA2 JUND MYBL1 MYBL2 TCF7L2
6489424
chr2 239772997 rs191219752 G A
EP300 FOS FOSL2 FOXA1 FOXA2 JUND TCF7L2
6489425
chr2 239773065 rs145156607 G A
EP300 FOS FOSL2 FOXA1 FOXA2 JUND TCF7L2 TFAP2C
6489426
chr2 239773074 rs537476662 TG T
EP300 FOS FOSL2 FOXA1 FOXA2 JUND TCF7L2 TFAP2C
6489427
chr2 239773118 rs183006473 G A
EP300 FOS FOSL2 FOXA1 FOXA2 JUND TCF7L2 TFAP2C
6489428
Genes possibly regulated by vista35478[chr2:239772979-239773251]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239756673 239795893 + TWIST2 ENSG00000233608.2 239756673 0.83 0.96 3308 83694
Expression level of Genes
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miRNAs possibly regulated by vista35478[chr2:239772979-239773251]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results