EnhancerDB
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  3. vista35482[chr2:239997480-239997793]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35482[chr2:239997480-239997793]
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Tissue distribution of vista35482
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Transcription factor that possibly regulate vista35482[chr2:239997480-239997793]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 239997523 239997535 HES7 JASPAR yes 22244741
chr2 239997523 239997535 PKNOX1 JASPAR yes 22244742
chr2 239997523 239997535 PKNOX2 JASPAR yes 22244743
chr2 239997523 239997535 TGIF1 JASPAR yes 22244744
chr2 239997523 239997535 TGIF2 JASPAR yes 22244745
chr2 239997523 239997535 HES7 JASPAR yes 82209454
chr2 239997523 239997535 PKNOX1 JASPAR yes 82209455
chr2 239997523 239997535 PKNOX2 JASPAR yes 82209456
chr2 239997523 239997535 TGIF1 JASPAR yes 82209457
chr2 239997523 239997535 TGIF2 JASPAR yes 82209458
chr2 239997524 239997533 SNAI2 JASPAR yes 22244746
chr2 239997524 239997533 SNAI2 JASPAR yes 82209459
chr2 239997524 239997534 HEY2 JASPAR yes 22244747
chr2 239997524 239997534 ID4 JASPAR yes 22244748
chr2 239997524 239997534 TCF4 JASPAR yes 22244749
chr2 239997524 239997534 HEY2 JASPAR yes 82209460
chr2 239997524 239997534 ID4 JASPAR yes 82209461
chr2 239997524 239997534 TCF4 JASPAR yes 82209462
chr2 239997527 239997540 SMAD2 JASPAR yes 22244750
chr2 239997527 239997540 SMAD2 JASPAR yes 82209463
chr2 239997543 239997562 RFX2 JASPAR yes 22244751
chr2 239997543 239997562 RFX2 JASPAR yes 82209464
chr2 239997547 239997563 RFX4 JASPAR yes 22244752
chr2 239997547 239997563 RFX4 JASPAR yes 82209465
chr2 239997548 239997562 E2F7 JASPAR yes 22244753
chr2 239997548 239997562 E2F7 JASPAR yes 82209466
chr2 239997548 239997567 RFX2 JASPAR yes 22244754
chr2 239997548 239997567 RFX2 JASPAR yes 82209467
chr2 239997549 239997561 E2F8 JASPAR yes 22244755
chr2 239997549 239997561 E2F8 JASPAR yes 82209468
chr2 239997560 239997566 SOX10 JASPAR yes 22244756
chr2 239997560 239997566 SOX10 JASPAR yes 82209469
chr2 239997574 239997579 GATA2 JASPAR yes 22244757
chr2 239997574 239997579 GATA2 JASPAR yes 82209470
chr2 239997577 239997589 NHLH1 JASPAR yes 22244758
chr2 239997577 239997589 NHLH1 JASPAR yes 82209471
chr2 239997577 239997597 TP63 JASPAR yes 22244759
chr2 239997577 239997597 TP63 JASPAR yes 82209472
chr2 239997578 239997587 SNAI2 JASPAR yes 22244760
chr2 239997578 239997587 SNAI2 JASPAR yes 82209473
chr2 239997578 239997588 TCF3 JASPAR yes 22244761
chr2 239997578 239997588 TCF4 JASPAR yes 22244762
chr2 239997578 239997588 TCF3 JASPAR yes 82209474
chr2 239997578 239997588 TCF4 JASPAR yes 82209475
chr2 239997580 239997589 ZEB1 JASPAR yes 22244763
chr2 239997580 239997589 ZEB1 JASPAR yes 82209476
chr2 239997582 239997587 SP1 TRANSFAC yes 22244764
chr2 239997582 239997587 SP1 TRANSFAC yes 82209477
chr2 239997595 239997607 TEAD1 JASPAR yes 22244765
chr2 239997595 239997607 TEAD1 JASPAR yes 82209478
chr2 239997640 239997645 SP1 TRANSFAC yes 22244766
chr2 239997640 239997645 SP1 TRANSFAC yes 82209479
chr2 239997641 239997646 SP1 TRANSFAC yes 22244767
chr2 239997641 239997646 SP1 TRANSFAC yes 82209480
chr2 239997644 239997657 SMAD2 JASPAR yes 22244768
chr2 239997644 239997657 SMAD2 JASPAR yes 82209481
chr2 239997663 239997674 FLI1 JASPAR yes 22244769
chr2 239997663 239997674 FLI1 JASPAR yes 82209482
chr2 239997665 239997684 RFX2 JASPAR yes 22244770
chr2 239997665 239997684 RFX2 JASPAR yes 82209483
chr2 239997667 239997678 STAT3 JASPAR yes 22244771
chr2 239997667 239997678 STAT3 JASPAR yes 82209484
chr2 239997691 239997696 GATA2 JASPAR yes 22244772
chr2 239997691 239997696 GATA2 JASPAR yes 82209485
chr2 239997704 239997716 HES5 JASPAR yes 22244773
chr2 239997704 239997716 HES7 JASPAR yes 22244774
chr2 239997704 239997716 HES5 JASPAR yes 82209486
chr2 239997704 239997716 HES7 JASPAR yes 82209487
chr2 239997705 239997715 HEY1 JASPAR yes 22244775
chr2 239997705 239997715 HEY2 JASPAR yes 22244776
chr2 239997705 239997715 HEY1 JASPAR yes 82209488
chr2 239997705 239997715 HEY2 JASPAR yes 82209489
chr2 239997726 239997742 ZNF143 JASPAR yes 22244777
chr2 239997726 239997742 ZNF143 JASPAR yes 82209490
chr2 239997742 239997748 SOX10 JASPAR yes 22244778
chr2 239997742 239997748 SOX10 JASPAR yes 82209491
chr2 239997756 239997761 GATA2 JASPAR yes 22244779
chr2 239997756 239997761 GATA2 JASPAR yes 82209492
chr2 239997769 239997774 SP1 TRANSFAC yes 22244780
chr2 239997769 239997774 SP1 TRANSFAC yes 82209493
chr2 239997770 239997775 SP1 TRANSFAC yes 22244781
chr2 239997770 239997775 SP1 TRANSFAC yes 82209494
chr2 239997773 239997786 SMAD2 JASPAR yes 22244782
chr2 239997773 239997786 SMAD2 JASPAR yes 82209495
chr2 239997792 239997803 ELK4 JASPAR yes 22244783
chr2 239997792 239997803 ELK4 JASPAR yes 82209496
chr2 239997793 239997803 GABPA JASPAR yes 22244784
chr2 239997793 239997803 GABPA JASPAR yes 82209497
chr2 239997793 239997805 ELF1 JASPAR yes 22244785
chr2 239997793 239997805 ELF4 JASPAR yes 22244786
chr2 239997793 239997805 ELF1 JASPAR yes 82209498
chr2 239997793 239997805 ELF4 JASPAR yes 82209499
SNP sites on vista35482[chr2:239997480-239997793]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 239997664 rs556636763 C T
FLI1
6491525
chr2 239997665 rs568559380 A G
FLI1 RFX2
6491526
chr2 239997677 rs539338188 A G
RFX2 STAT3
6491527
chr2 239997681 rs376968007 G A,C
RFX2
6491528
chr2 239997710 rs1979449 C A
HES5 HES7 HEY1 HEY2
6491529
chr2 239997711 rs148581735 G A
HES5 HES7 HEY1 HEY2
6491530
chr2 239997774 rs533400476 G A
SMAD2 SP1
6491531
Genes possibly regulated by vista35482[chr2:239997480-239997793]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 240083493 240084053 - AC017028.1 ENSG00000213828.1 240084053 0.96 1.0 3310 13740
Expression level of Genes
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miRNAs possibly regulated by vista35482[chr2:239997480-239997793]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results