EnhancerDB
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  3. vista35488[chr2:240145548-240145836]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35488[chr2:240145548-240145836]
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Tissue distribution of vista35488
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Transcription factor that possibly regulate vista35488[chr2:240145548-240145836]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240145445 240145660 FOXA1 UCSC Txn Factor no Conserved 108435998
chr2 240145464 240145760 HNF4A UCSC Txn Factor no Conserved 108435999
chr2 240145534 240145549 FOXA1 JASPAR yes 22245188
chr2 240145534 240145549 FOXA1 JASPAR yes 82217753
chr2 240145544 240145553 SRY JASPAR yes 22245189
chr2 240145544 240145553 SRY JASPAR yes 82217757
chr2 240145548 240145563 FOXP1 JASPAR yes 22245190
chr2 240145548 240145563 FOXP1 JASPAR yes 82217758
chr2 240145549 240145564 FOXP1 JASPAR yes 22245191
chr2 240145549 240145564 FOXP1 JASPAR yes 82217759
chr2 240145550 240145556 TBP TRANSFAC yes 22245192
chr2 240145550 240145556 TBP TRANSFAC yes 82217760
chr2 240145550 240145565 FOXP1 JASPAR yes 22245193
chr2 240145550 240145565 FOXP1 JASPAR yes 82217761
chr2 240145550 240145571 IRF1 JASPAR yes 22245194
chr2 240145550 240145571 IRF1 JASPAR yes 82217762
chr2 240145551 240145566 FOXP1 JASPAR yes 22245195
chr2 240145551 240145566 FOXP1 JASPAR yes 82217763
chr2 240145552 240145567 FOXP1 JASPAR yes 22245196
chr2 240145552 240145567 FOXP1 JASPAR yes 82217764
chr2 240145554 240145569 PRDM1 JASPAR yes 22245197
chr2 240145554 240145569 PRDM1 JASPAR yes 82217765
chr2 240145555 240145576 IRF1 JASPAR yes 22245198
chr2 240145555 240145576 IRF1 JASPAR yes 82217766
chr2 240145556 240145577 IRF1 JASPAR yes 22245199
chr2 240145556 240145577 IRF1 JASPAR yes 82217767
chr2 240145560 240145575 PRDM1 JASPAR yes 22245200
chr2 240145560 240145575 PRDM1 JASPAR yes 82217768
chr2 240145561 240145582 IRF1 JASPAR yes 22245201
chr2 240145561 240145582 IRF1 JASPAR yes 82217769
chr2 240145562 240145577 FOXP1 JASPAR yes 22245202
chr2 240145562 240145577 FOXP1 JASPAR yes 82217770
chr2 240145565 240145579 STAT1 JASPAR yes 22245203
chr2 240145565 240145579 STAT1 JASPAR yes 82217771
chr2 240145565 240145580 STAT2 JASPAR yes 22245204
chr2 240145565 240145580 STAT2 JASPAR yes 82217772
chr2 240145570 240145585 HNF4G JASPAR yes 22245205
chr2 240145570 240145585 HNF4G JASPAR yes 82217773
chr2 240145575 240145581 SOX10 JASPAR yes 22245206
chr2 240145575 240145581 SOX10 JASPAR yes 82217774
chr2 240145585 240145591 SOX10 JASPAR yes 22245207
chr2 240145585 240145591 SOX10 JASPAR yes 82217775
chr2 240145589 240145604 HNF4A JASPAR yes 22245208
chr2 240145589 240145604 HNF4A JASPAR yes 82217776
chr2 240145609 240145615 ZNF354C JASPAR yes 22245209
chr2 240145609 240145615 ZNF354C JASPAR yes 82217777
chr2 240145635 240145646 DMRT3 JASPAR yes 22245210
chr2 240145635 240145646 DMRT3 JASPAR yes 82217778
chr2 240145638 240145643 GATA1 TRANSFAC yes 22245211
chr2 240145638 240145643 GATA1 TRANSFAC yes 82217779
chr2 240145655 240145664 HIC2 JASPAR yes 22245212
chr2 240145655 240145664 HIC2 JASPAR yes 82217780
chr2 240145662 240145673 NRF1 JASPAR yes 22245213
chr2 240145662 240145673 NRF1 JASPAR yes 82217781
chr2 240145669 240145675 SP1 TRANSFAC yes 22245214
chr2 240145669 240145675 SP1 TRANSFAC yes 82217782
chr2 240145669 240145679 SP1 JASPAR yes 22245215
chr2 240145669 240145679 ZNF740 JASPAR yes 22245216
chr2 240145669 240145679 SP1 JASPAR yes 82217783
chr2 240145669 240145679 ZNF740 JASPAR yes 82217784
chr2 240145755 240145764 PITX3 JASPAR yes 22245217
chr2 240145755 240145764 PITX3 JASPAR yes 82217785
chr2 240145755 240145765 GSC2 JASPAR yes 22245218
chr2 240145755 240145765 GSC JASPAR yes 22245219
chr2 240145755 240145765 GSC2 JASPAR yes 82217786
chr2 240145755 240145765 GSC JASPAR yes 82217787
chr2 240145756 240145764 OTX2 JASPAR yes 22245220
chr2 240145756 240145764 OTX2 JASPAR yes 82217788
chr2 240145790 240145800 TEAD1 JASPAR yes 22245221
chr2 240145790 240145800 TEAD1 JASPAR yes 82217789
chr2 240145795 240145801 MZF1 JASPAR yes 22245222
chr2 240145795 240145801 MZF1 JASPAR yes 82217790
chr2 240145811 240145822 DUX4 JASPAR yes 22245223
chr2 240145811 240145822 DUX4 JASPAR yes 82217791
SNP sites on vista35488[chr2:240145548-240145836]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240145602 rs188704936 C T
FOXA1 HNF4A
6492721
chr2 240145618 rs376309621 C T
FOXA1 HNF4A
6492722
chr2 240145638 rs11685880 T C,G
DMRT3 FOXA1 GATA1 HNF4A
6492723
chr2 240145672 rs114475729 C A
HNF4A NRF1 SP1 ZNF740
6492724
chr2 240145704 rs529107622 T C
HNF4A
6492725
Genes possibly regulated by vista35488[chr2:240145548-240145836]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 240083493 240084053 - AC017028.1 ENSG00000213828.1 240084053 0.96 1.0 3310 38505
Expression level of Genes
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miRNAs possibly regulated by vista35488[chr2:240145548-240145836]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results