EnhancerDB
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  3. vista35490[chr2:240161951-240162602]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35490[chr2:240161951-240162602]
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Tissue distribution of vista35490
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Transcription factor that possibly regulate vista35490[chr2:240161951-240162602]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240162184 240162401 MEF2A UCSC Txn Factor no Conserved 108436000
chr2 240162273 240162573 NR3C1 UCSC Txn Factor no Conserved 108436001
chr2 240161939 240161958 PAX5 JASPAR yes 22245258
chr2 240161939 240161958 PAX5 JASPAR yes 82219770
chr2 240161949 240161953 LFA1 TRANSFAC yes 22245259
chr2 240161949 240161953 LFA1 TRANSFAC yes 82219771
chr2 240161958 240161971 SMAD2 JASPAR yes 22245260
chr2 240161958 240161971 SMAD2 JASPAR yes 82219772
chr2 240161959 240161978 RFX2 JASPAR yes 22245261
chr2 240161959 240161978 RFX2 JASPAR yes 82219773
chr2 240161961 240161976 RFX5 JASPAR yes 22245262
chr2 240161961 240161976 RFX5 JASPAR yes 82219774
chr2 240161962 240161966 NFE TRANSFAC yes 22245263
chr2 240161962 240161966 NFE TRANSFAC yes 82219775
chr2 240162011 240162025 ATF7 JASPAR yes 22245264
chr2 240162011 240162025 BATF3 JASPAR yes 22245265
chr2 240162011 240162025 ATF7 JASPAR yes 82219776
chr2 240162011 240162025 BATF3 JASPAR yes 82219777
chr2 240162012 240162024 JDP2 JASPAR yes 22245266
chr2 240162012 240162024 JDP2 JASPAR yes 82219778
chr2 240162049 240162052 MYB TRANSFAC yes 22245267
chr2 240162049 240162052 MYB TRANSFAC yes 82219779
chr2 240162054 240162069 FOXP1 JASPAR yes 22245268
chr2 240162054 240162069 FOXP1 JASPAR yes 82219780
chr2 240162084 240162105 IRF1 JASPAR yes 22245269
chr2 240162084 240162105 IRF1 JASPAR yes 82219781
chr2 240162087 240162101 IRF7 JASPAR yes 22245270
chr2 240162087 240162101 IRF7 JASPAR yes 82219782
chr2 240162091 240162102 PHOX2A JASPAR yes 22245271
chr2 240162091 240162102 PROP1 JASPAR yes 22245272
chr2 240162091 240162102 PHOX2A JASPAR yes 82219783
chr2 240162091 240162102 PROP1 JASPAR yes 82219784
chr2 240162097 240162105 HOXA5 JASPAR yes 22245273
chr2 240162097 240162105 HOXA5 JASPAR yes 82219785
chr2 240162112 240162122 TEAD4 JASPAR yes 22245274
chr2 240162112 240162122 TEAD4 JASPAR yes 82219786
chr2 240162113 240162123 RELA JASPAR yes 22245275
chr2 240162113 240162123 REL JASPAR yes 22245276
chr2 240162113 240162123 RELA JASPAR yes 82219787
chr2 240162113 240162123 REL JASPAR yes 82219788
chr2 240162113 240162124 NFKB1 JASPAR yes 22245277
chr2 240162113 240162124 NFKB1 JASPAR yes 82219789
chr2 240162114 240162124 RELA JASPAR yes 22245278
chr2 240162114 240162124 REL JASPAR yes 22245279
chr2 240162114 240162124 RELA JASPAR yes 82219790
chr2 240162114 240162124 REL JASPAR yes 82219791
chr2 240162114 240162128 POU1F1 JASPAR yes 22245280
chr2 240162114 240162128 POU1F1 JASPAR yes 82219792
chr2 240162115 240162127 POU3F1 JASPAR yes 22245281
chr2 240162115 240162127 POU3F2 JASPAR yes 22245282
chr2 240162115 240162127 POU3F1 JASPAR yes 82219793
chr2 240162115 240162127 POU3F2 JASPAR yes 82219794
chr2 240162115 240162128 POU3F3 JASPAR yes 22245283
chr2 240162115 240162128 POU3F3 JASPAR yes 82219795
chr2 240162116 240162126 NFATC3 JASPAR yes 22245284
chr2 240162116 240162126 NFATC3 JASPAR yes 82219796
chr2 240162116 240162128 POU2F1 JASPAR yes 22245285
chr2 240162116 240162128 POU2F1 JASPAR yes 82219797
chr2 240162117 240162126 POU3F4 JASPAR yes 22245286
chr2 240162117 240162126 POU5F1B JASPAR yes 22245287
chr2 240162117 240162126 POU3F4 JASPAR yes 82219798
chr2 240162117 240162126 POU5F1B JASPAR yes 82219799
chr2 240162124 240162128 YY1 TRANSFAC yes 22245288
chr2 240162124 240162128 YY1 TRANSFAC yes 82219800
chr2 240162129 240162144 TFAP2A JASPAR yes 22245289
chr2 240162129 240162144 TFAP2C JASPAR yes 22245290
chr2 240162129 240162144 TFAP2A JASPAR yes 82219801
chr2 240162129 240162144 TFAP2C JASPAR yes 82219802
chr2 240162132 240162144 TFAP2A JASPAR yes 22245291
chr2 240162132 240162144 TFAP2B JASPAR yes 22245292
chr2 240162132 240162144 TFAP2C JASPAR yes 22245293
chr2 240162132 240162144 TFAP2A JASPAR yes 82219803
chr2 240162132 240162144 TFAP2B JASPAR yes 82219804
chr2 240162132 240162144 TFAP2C JASPAR yes 82219805
chr2 240162186 240162197 HOXC13 JASPAR yes 22245294
chr2 240162186 240162197 HOXC13 JASPAR yes 82219806
chr2 240162192 240162213 ZNF263 JASPAR yes 22245295
chr2 240162192 240162213 ZNF263 JASPAR yes 82219807
chr2 240162214 240162219 ETS2 TRANSFAC yes 22245296
chr2 240162214 240162219 ETS2 TRANSFAC yes 82219808
chr2 240162227 240162238 FLI1 JASPAR yes 22245297
chr2 240162227 240162238 FLI1 JASPAR yes 82219809
chr2 240162228 240162238 ETV6 JASPAR yes 22245298
chr2 240162228 240162238 ETV6 JASPAR yes 82219810
chr2 240162228 240162239 ELF5 JASPAR yes 22245299
chr2 240162228 240162239 ELF5 JASPAR yes 82219811
chr2 240162228 240162241 ELF1 JASPAR yes 22245300
chr2 240162228 240162241 ELF1 JASPAR yes 82219812
chr2 240162228 240162242 SPI1 JASPAR yes 22245301
chr2 240162228 240162242 SPI1 JASPAR yes 82219813
chr2 240162229 240162236 SPI1 JASPAR yes 22245302
chr2 240162229 240162236 SPI1 JASPAR yes 82219814
chr2 240162229 240162237 EHF JASPAR yes 22245303
chr2 240162229 240162237 EHF JASPAR yes 82219815
chr2 240162260 240162270 MZF1 JASPAR yes 22245304
chr2 240162260 240162270 MZF1 JASPAR yes 82219816
chr2 240162261 240162275 GATA2 JASPAR yes 22245305
chr2 240162261 240162275 GATA2 JASPAR yes 82219817
chr2 240162265 240162273 GATA3 JASPAR yes 22245306
chr2 240162265 240162273 GATA5 JASPAR yes 22245307
chr2 240162265 240162273 GATA3 JASPAR yes 82219818
chr2 240162265 240162273 GATA5 JASPAR yes 82219819
chr2 240162271 240162275 NFE TRANSFAC yes 22245308
chr2 240162271 240162275 NFE TRANSFAC yes 82219820
chr2 240162286 240162301 MEF2A JASPAR yes 22245309
chr2 240162286 240162301 MEF2A JASPAR yes 82219821
chr2 240162287 240162302 MEF2C JASPAR yes 22245310
chr2 240162287 240162302 MEF2C JASPAR yes 82219822
chr2 240162288 240162300 MEF2A JASPAR yes 22245311
chr2 240162288 240162300 MEF2B JASPAR yes 22245312
chr2 240162288 240162300 MEF2D JASPAR yes 22245313
chr2 240162288 240162300 MEF2A JASPAR yes 82219823
chr2 240162288 240162300 MEF2B JASPAR yes 82219824
chr2 240162288 240162300 MEF2D JASPAR yes 82219825
chr2 240162289 240162299 MEF2A JASPAR yes 22245314
chr2 240162289 240162299 MEF2A JASPAR yes 82219826
chr2 240162290 240162294 YY1 TRANSFAC yes 22245315
chr2 240162290 240162294 YY1 TRANSFAC yes 82219827
chr2 240162321 240162338 NR3C2 JASPAR yes 22245316
chr2 240162321 240162338 NR3C2 JASPAR yes 82219828
chr2 240162323 240162338 AR JASPAR yes 22245317
chr2 240162323 240162338 AR JASPAR yes 82219829
chr2 240162334 240162352 MAFF JASPAR yes 22245318
chr2 240162334 240162352 MAFF JASPAR yes 82219830
chr2 240162344 240162348 YY1 TRANSFAC yes 22245319
chr2 240162344 240162348 YY1 TRANSFAC yes 82219831
chr2 240162383 240162394 E2F6 JASPAR yes 22245320
chr2 240162383 240162394 E2F6 JASPAR yes 82219832
chr2 240162395 240162415 PPARG JASPAR yes 22245321
chr2 240162395 240162415 PPARG JASPAR yes 82219833
chr2 240162404 240162421 NR3C1 JASPAR yes 22245322
chr2 240162404 240162421 NR3C2 JASPAR yes 22245323
chr2 240162404 240162421 NR3C1 JASPAR yes 82219834
chr2 240162404 240162421 NR3C2 JASPAR yes 82219835
chr2 240162423 240162438 AR JASPAR yes 22245324
chr2 240162423 240162438 AR JASPAR yes 82219836
chr2 240162423 240162440 NR3C1 JASPAR yes 22245325
chr2 240162423 240162440 NR3C2 JASPAR yes 22245326
chr2 240162423 240162440 NR3C1 JASPAR yes 82219837
chr2 240162423 240162440 NR3C2 JASPAR yes 82219838
chr2 240162424 240162434 TFEB JASPAR yes 22245327
chr2 240162424 240162434 TFEC JASPAR yes 22245328
chr2 240162424 240162434 TFEB JASPAR yes 82219839
chr2 240162424 240162434 TFEC JASPAR yes 82219840
chr2 240162425 240162440 AR JASPAR yes 22245329
chr2 240162425 240162440 AR JASPAR yes 82219841
chr2 240162484 240162501 BCL6B JASPAR yes 22245330
chr2 240162484 240162501 BCL6B JASPAR yes 82219842
chr2 240162500 240162511 E2F4 JASPAR yes 22245331
chr2 240162500 240162511 E2F4 JASPAR yes 82219843
chr2 240162501 240162508 E2F4 TRANSFAC yes 22245332
chr2 240162501 240162508 E2F4 TRANSFAC yes 82219844
chr2 240162501 240162509 E2F1 JASPAR yes 22245333
chr2 240162501 240162509 E2F1 TRANSFAC yes 22245334
chr2 240162501 240162509 E2F1 JASPAR yes 82219845
chr2 240162501 240162509 E2F1 TRANSFAC yes 82219846
chr2 240162509 240162529 TP63 JASPAR yes 22245335
chr2 240162509 240162529 TP63 JASPAR yes 82219847
chr2 240162532 240162541 SOX9 JASPAR yes 22245336
chr2 240162532 240162541 SOX9 JASPAR yes 82219848
chr2 240162553 240162558 SP1 TRANSFAC yes 22245337
chr2 240162553 240162558 SP1 TRANSFAC yes 82219849
chr2 240162554 240162565 EBF1 JASPAR yes 22245338
chr2 240162554 240162565 EBF1 JASPAR yes 82219850
chr2 240162555 240162566 EBF1 JASPAR yes 22245339
chr2 240162555 240162566 EBF1 JASPAR yes 82219851
chr2 240162562 240162568 PEA3 TRANSFAC yes 22245340
chr2 240162562 240162568 PEA3 TRANSFAC yes 82219852
chr2 240162586 240162601 STAT2 JASPAR yes 22245341
chr2 240162586 240162601 STAT2 JASPAR yes 82219853
chr2 240162588 240162600 IRF1 JASPAR yes 22245342
chr2 240162588 240162600 IRF1 JASPAR yes 82219854
SNP sites on vista35490[chr2:240161951-240162602]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240161960 rs111721060 C T
RFX2 SMAD2
6492945
chr2 240161992 rs140830329 G A no 6492946
chr2 240161994 rs6761340 T G no 6492947
chr2 240162026 rs79867326 G A no 6492948
chr2 240162319 rs114450887 C T
MEF2A NR3C1
6492949
chr2 240162328 rs189223779 T C
AR MEF2A NR3C1 NR3C2
6492950
chr2 240162366 rs147006663 G A
MEF2A NR3C1
6492951
chr2 240162505 rs57446864 C T
E2F1 E2F4 NR3C1
6492952
Genes possibly regulated by vista35490[chr2:240161951-240162602]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 240083493 240084053 - AC017028.1 ENSG00000213828.1 240084053 0.96 1.0 3310 22102
Expression level of Genes
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miRNAs possibly regulated by vista35490[chr2:240161951-240162602]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results