EnhancerDB
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  3. vista35509[chr2:240248408-240248826]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35509[chr2:240248408-240248826]
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Tissue distribution of vista35509
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Transcription factor that possibly regulate vista35509[chr2:240248408-240248826]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240248625 240248866 RUNX3 UCSC Txn Factor no Conserved 108436027
chr2 240248406 240248421 FOXP1 JASPAR yes 22246247
chr2 240248406 240248421 FOXP1 JASPAR yes 82231425
chr2 240248409 240248420 FOXP2 JASPAR yes 22246248
chr2 240248409 240248420 FOXP2 JASPAR yes 82231426
chr2 240248412 240248431 CTCF JASPAR yes 22246249
chr2 240248412 240248431 CTCF JASPAR yes 82231427
chr2 240248415 240248427 TAL1 JASPAR yes 22246250
chr2 240248415 240248427 TAL1 JASPAR yes 82231428
chr2 240248417 240248427 NEUROG2 JASPAR yes 22246251
chr2 240248417 240248427 NEUROG2 JASPAR yes 82231429
chr2 240248417 240248429 TAL1 JASPAR yes 22246252
chr2 240248417 240248429 TAL1 JASPAR yes 82231430
chr2 240248421 240248427 YY1 JASPAR yes 22246253
chr2 240248421 240248427 YY1 JASPAR yes 82231431
chr2 240248451 240248466 HSF1 JASPAR yes 22246254
chr2 240248451 240248466 HSF1 JASPAR yes 82231432
chr2 240248452 240248465 HSF4 JASPAR yes 22246255
chr2 240248452 240248465 HSF4 JASPAR yes 82231433
chr2 240248466 240248471 SP1 TRANSFAC yes 22246256
chr2 240248466 240248471 SP1 TRANSFAC yes 82231434
chr2 240248474 240248478 LFA1 TRANSFAC yes 22246257
chr2 240248474 240248478 LFA1 TRANSFAC yes 82231435
chr2 240248490 240248503 ZBTB18 JASPAR yes 22246258
chr2 240248490 240248503 ZBTB18 JASPAR yes 82231436
chr2 240248491 240248501 MSC JASPAR yes 22246259
chr2 240248491 240248501 MSC JASPAR yes 82231437
chr2 240248510 240248514 H4TF2 TRANSFAC yes 22246260
chr2 240248510 240248514 H4TF2 TRANSFAC yes 82231438
chr2 240248515 240248527 ZBTB7B JASPAR yes 22246261
chr2 240248515 240248527 ZBTB7B JASPAR yes 82231439
chr2 240248526 240248532 ZNF354C JASPAR yes 22246262
chr2 240248526 240248532 ZNF354C JASPAR yes 82231440
chr2 240248531 240248540 ZEB1 JASPAR yes 22246263
chr2 240248531 240248540 ZEB1 JASPAR yes 82231441
chr2 240248531 240248543 NHLH1 JASPAR yes 22246264
chr2 240248531 240248543 NHLH1 JASPAR yes 82231442
chr2 240248532 240248542 NHLH1 JASPAR yes 22246265
chr2 240248532 240248542 NHLH1 JASPAR yes 82231443
chr2 240248534 240248539 USF2 TRANSFAC yes 22246266
chr2 240248534 240248539 USF2 TRANSFAC yes 82231444
chr2 240248560 240248574 PLAG1 JASPAR yes 22246267
chr2 240248560 240248574 PLAG1 JASPAR yes 82231445
chr2 240248563 240248576 TFAP2A JASPAR yes 22246268
chr2 240248563 240248576 TFAP2B JASPAR yes 22246269
chr2 240248563 240248576 TFAP2C JASPAR yes 22246270
chr2 240248563 240248576 TFAP2A JASPAR yes 82231446
chr2 240248563 240248576 TFAP2B JASPAR yes 82231447
chr2 240248563 240248576 TFAP2C JASPAR yes 82231448
chr2 240248571 240248575 LFA1 TRANSFAC yes 22246271
chr2 240248571 240248575 LFA1 TRANSFAC yes 82231449
chr2 240248585 240248595 ZNF740 JASPAR yes 22246272
chr2 240248585 240248595 ZNF740 JASPAR yes 82231450
chr2 240248586 240248598 INSM1 JASPAR yes 22246273
chr2 240248586 240248598 INSM1 JASPAR yes 82231451
chr2 240248593 240248608 AR JASPAR yes 22246274
chr2 240248593 240248608 AR JASPAR yes 82231452
chr2 240248600 240248613 NR2F1 JASPAR yes 22246275
chr2 240248600 240248613 NR2F1 JASPAR yes 82231453
chr2 240248602 240248610 NR4A2 JASPAR yes 22246276
chr2 240248602 240248610 NR4A2 JASPAR yes 82231454
chr2 240248604 240248608 ESR1 TRANSFAC yes 22246277
chr2 240248604 240248608 ESR1 TRANSFAC yes 82231455
chr2 240248606 240248618 PKNOX1 JASPAR yes 22246278
chr2 240248606 240248618 TGIF1 JASPAR yes 22246279
chr2 240248606 240248618 PKNOX1 JASPAR yes 82231456
chr2 240248606 240248618 TGIF1 JASPAR yes 82231457
chr2 240248611 240248619 MEIS2 JASPAR yes 22246280
chr2 240248611 240248619 MEIS3 JASPAR yes 22246281
chr2 240248611 240248619 MEIS2 JASPAR yes 82231458
chr2 240248611 240248619 MEIS3 JASPAR yes 82231459
chr2 240248612 240248616 NFE TRANSFAC yes 22246282
chr2 240248612 240248616 NFE TRANSFAC yes 82231460
chr2 240248687 240248702 AR JASPAR yes 22246283
chr2 240248687 240248702 AR JASPAR yes 82231461
chr2 240248710 240248722 HNF1B JASPAR yes 22246284
chr2 240248710 240248722 HNF1B JASPAR yes 82231462
chr2 240248724 240248739 SCRT1 JASPAR yes 22246285
chr2 240248724 240248739 SCRT1 JASPAR yes 82231463
chr2 240248725 240248735 FIGLA JASPAR yes 22246286
chr2 240248725 240248735 ID4 JASPAR yes 22246287
chr2 240248725 240248735 TCF3 JASPAR yes 22246288
chr2 240248725 240248735 TCF4 JASPAR yes 22246289
chr2 240248725 240248735 FIGLA JASPAR yes 82231464
chr2 240248725 240248735 ID4 JASPAR yes 82231465
chr2 240248725 240248735 TCF3 JASPAR yes 82231466
chr2 240248725 240248735 TCF4 JASPAR yes 82231467
chr2 240248726 240248735 SNAI2 JASPAR yes 22246290
chr2 240248726 240248735 SNAI2 JASPAR yes 82231468
chr2 240248726 240248739 SCRT2 JASPAR yes 22246291
chr2 240248726 240248739 SCRT2 JASPAR yes 82231469
chr2 240248727 240248732 USF2 TRANSFAC yes 22246292
chr2 240248727 240248732 USF2 TRANSFAC yes 82231470
chr2 240248728 240248734 PTF TRANSFAC yes 22246293
chr2 240248728 240248734 PTF TRANSFAC yes 82231471
chr2 240248731 240248746 STAT1 JASPAR yes 22246294
chr2 240248731 240248746 STAT1 JASPAR yes 82231472
chr2 240248733 240248744 STAT1 JASPAR yes 22246295
chr2 240248733 240248744 STAT3 JASPAR yes 22246296
chr2 240248733 240248744 STAT1 JASPAR yes 82231473
chr2 240248733 240248744 STAT3 JASPAR yes 82231474
chr2 240248735 240248745 NFATC3 JASPAR yes 22246297
chr2 240248735 240248745 NFATC3 JASPAR yes 82231475
chr2 240248737 240248744 NFATC2 JASPAR yes 22246298
chr2 240248737 240248744 NFATC2 JASPAR yes 82231476
chr2 240248753 240248767 JUN JASPAR yes 22246299
chr2 240248753 240248767 JUN JASPAR yes 82231477
chr2 240248756 240248767 FOSL2 JASPAR yes 22246300
chr2 240248756 240248767 JUNB JASPAR yes 22246301
chr2 240248756 240248767 FOSL2 JASPAR yes 82231478
chr2 240248756 240248767 JUNB JASPAR yes 82231479
chr2 240248757 240248768 FOS JASPAR yes 22246302
chr2 240248757 240248768 FOSL1 JASPAR yes 22246303
chr2 240248757 240248768 JUND JASPAR yes 22246304
chr2 240248757 240248768 NFE2 JASPAR yes 22246305
chr2 240248757 240248768 FOS JASPAR yes 82231480
chr2 240248757 240248768 FOSL1 JASPAR yes 82231481
chr2 240248757 240248768 JUND JASPAR yes 82231482
chr2 240248757 240248768 NFE2 JASPAR yes 82231483
chr2 240248758 240248772 JUN JASPAR yes 22246306
chr2 240248758 240248772 JUN JASPAR yes 82231484
chr2 240248782 240248792 MYF6 JASPAR yes 22246307
chr2 240248782 240248792 NEUROG2 JASPAR yes 22246308
chr2 240248782 240248792 MYF6 JASPAR yes 82231485
chr2 240248782 240248792 NEUROG2 JASPAR yes 82231486
chr2 240248807 240248822 TFAP2A JASPAR yes 22246309
chr2 240248807 240248822 TFAP2A JASPAR yes 82231487
chr2 240248816 240248821 ETS2 TRANSFAC yes 22246310
chr2 240248816 240248821 ETS2 TRANSFAC yes 82231488
SNP sites on vista35509[chr2:240248408-240248826]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240248479 rs146437257 A T no 6494096
chr2 240248613 rs75886743 C G
MEIS2 MEIS3 NFE NR2F1 PKNOX1 TGIF1
6494097
chr2 240248740 rs560581063 G GA
NFATC2 NFATC3 RUNX3 STAT1 STAT3
6494098
Genes possibly regulated by vista35509[chr2:240248408-240248826]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239969864 240323348 - HDAC4 ENSG00000068024.12 240323348 0.76 1.0 3309 25478
chr2 240323130 240324058 + AC062017.1 ENSG00000222020.2 240323130 0.65 1.0 3311 25696
Expression level of Genes
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miRNAs possibly regulated by vista35509[chr2:240248408-240248826]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results