EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	id
chr2	240267454	240267467	SMAD2	JASPAR	yes	22246419
chr2	240267454	240267467	SMAD2	JASPAR	yes	82233360
chr2	240267475	240267481	HiNF-A	TRANSFAC	yes	22246420
chr2	240267475	240267481	HiNF-A	TRANSFAC	yes	82233361
chr2	240267485	240267505	RREB1	JASPAR	yes	22246421
chr2	240267485	240267505	RREB1	JASPAR	yes	82233362
chr2	240267493	240267496	MYB	TRANSFAC	yes	22246422
chr2	240267493	240267496	MYB	TRANSFAC	yes	82233363
chr2	240267513	240267524	FOXH1	JASPAR	yes	22246423
chr2	240267513	240267524	FOXH1	JASPAR	yes	82233364
chr2	240267527	240267540	SMAD2	JASPAR	yes	22246424
chr2	240267527	240267540	SMAD2	JASPAR	yes	82233365
chr2	240267543	240267563	RREB1	JASPAR	yes	22246425
chr2	240267543	240267563	RREB1	JASPAR	yes	82233366
chr2	240267547	240267567	RREB1	JASPAR	yes	22246426
chr2	240267547	240267567	RREB1	JASPAR	yes	82233367
chr2	240267548	240267554	HiNF-A	TRANSFAC	yes	22246427
chr2	240267548	240267554	HiNF-A	TRANSFAC	yes	82233368
chr2	240267554	240267574	RREB1	JASPAR	yes	22246428
chr2	240267554	240267574	RREB1	JASPAR	yes	82233369
chr2	240267559	240267579	RREB1	JASPAR	yes	22246429
chr2	240267559	240267579	RREB1	JASPAR	yes	82233370
chr2	240267562	240267565	MYB	TRANSFAC	yes	22246430
chr2	240267562	240267565	MYB	TRANSFAC	yes	82233371
chr2	240267575	240267580	MYC	TRANSFAC	yes	22246431
chr2	240267575	240267580	MYC	TRANSFAC	yes	82233372
chr2	240267581	240267601	RREB1	JASPAR	yes	22246432
chr2	240267581	240267601	RREB1	JASPAR	yes	82233373
chr2	240267583	240267603	RREB1	JASPAR	yes	22246433
chr2	240267583	240267603	RREB1	JASPAR	yes	82233374
chr2	240267584	240267590	HiNF-A	TRANSFAC	yes	22246434
chr2	240267584	240267590	HiNF-A	TRANSFAC	yes	82233375
chr2	240267590	240267610	RREB1	JASPAR	yes	22246435
chr2	240267590	240267610	RREB1	JASPAR	yes	82233376
chr2	240267594	240267604	ZNF740	JASPAR	yes	22246436
chr2	240267594	240267604	ZNF740	JASPAR	yes	82233377
chr2	240267595	240267605	GCM2	JASPAR	yes	22246437
chr2	240267595	240267605	GCM2	JASPAR	yes	82233378
chr2	240267608	240267618	BHLHE40	JASPAR	yes	22246438
chr2	240267608	240267618	CLOCK	JASPAR	yes	22246439
chr2	240267608	240267618	HEY1	JASPAR	yes	22246440
chr2	240267608	240267618	MAX	JASPAR	yes	22246441
chr2	240267608	240267618	MNT	JASPAR	yes	22246442
chr2	240267608	240267618	BHLHE40	JASPAR	yes	82233379
chr2	240267608	240267618	CLOCK	JASPAR	yes	82233380
chr2	240267608	240267618	HEY1	JASPAR	yes	82233381
chr2	240267608	240267618	MAX	JASPAR	yes	82233382
chr2	240267608	240267618	MNT	JASPAR	yes	82233383
chr2	240267610	240267615	MYC	TRANSFAC	yes	22246443
chr2	240267610	240267615	USF1	TRANSFAC	yes	22246444
chr2	240267610	240267615	USF2	TRANSFAC	yes	22246445
chr2	240267610	240267615	MYC	TRANSFAC	yes	82233384
chr2	240267610	240267615	USF1	TRANSFAC	yes	82233385
chr2	240267610	240267615	USF2	TRANSFAC	yes	82233386
chr2	240267625	240267628	MYB	TRANSFAC	yes	22246446
chr2	240267625	240267628	MYB	TRANSFAC	yes	82233387
chr2	240267625	240267637	FOXI1	JASPAR	yes	22246447
chr2	240267625	240267637	FOXI1	JASPAR	yes	82233388
chr2	240267629	240267635	HiNF-A	TRANSFAC	yes	22246448
chr2	240267629	240267635	HiNF-A	TRANSFAC	yes	82233389
chr2	240267643	240267646	MYB	TRANSFAC	yes	22246449
chr2	240267643	240267646	MYB	TRANSFAC	yes	82233390
chr2	240267656	240267661	MYC	TRANSFAC	yes	22246450
chr2	240267656	240267661	MYC	TRANSFAC	yes	82233391
chr2	240267665	240267671	HiNF-A	TRANSFAC	yes	22246451
chr2	240267665	240267671	HiNF-A	TRANSFAC	yes	82233392

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr2	240267451	rs199667023	ACCC	A	no	6494275
chr2	240267451	rs773414770	ACCC	A	no	6494276
chr2	240267488	rs544596443	AC	A	RREB1	6494277
chr2	240267493	rs115991046	C	T	MYB RREB1	6494278
chr2	240267524	rs145421360	A	AC	FOXH1	6494279
chr2	240267524	rs58312576	A	AC	FOXH1	6494280
chr2	240267530	rs114492065	G	A	SMAD2	6494281
chr2	240267547	rs1024957130	TCAAA	T	RREB1	6494282
chr2	240267547	rs546359478	TCAAACA	T	RREB1	6494283
chr2	240267547	rs550602563	TCAAA	T	RREB1	6494284
chr2	240267570	rs111162889	C	A	RREB1	6494285
chr2	240267578	rs571574991	C	T	MYC RREB1	6494286
chr2	240267586	rs373645538	A	AAC	HiNF-A RREB1	6494287
chr2	240267586	rs551837851	A	AAC	HiNF-A RREB1	6494288
chr2	240267598	rs554034153	C	A,T	GCM2 RREB1 ZNF740	6494289
chr2	240267626	rs369501958	TAACA	T	FOXI1 MYB	6494290
chr2	240267626	rs555963498	TAACA	T	FOXI1 MYB	6494291

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr2	239969864	240323348	-	HDAC4	ENSG00000068024.12	240323348	0.76	1.0	3309	44318
chr2	240323130	240324058	+	AC062017.1	ENSG00000222020.2	240323130	0.65	1.0	3311	44536

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista35513[chr2:240267449-240267666]

Tissue distribution of vista35513

Transcription factor that possibly regulate vista35513[chr2:240267449-240267666]

SNP sites on vista35513[chr2:240267449-240267666]

Genes possibly regulated by vista35513[chr2:240267449-240267666]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista35513[chr2:240267449-240267666]

Details of miRNAs

Expression level of miRNAs