EnhancerDB
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  3. vista35523[chr2:240387329-240387689]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35523[chr2:240387329-240387689]
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Tissue distribution of vista35523
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Transcription factor that possibly regulate vista35523[chr2:240387329-240387689]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240387321 240387334 ZBED1 JASPAR yes 22246847
chr2 240387321 240387334 ZBED1 JASPAR yes 82244026
chr2 240387322 240387335 ZBED1 JASPAR yes 22246848
chr2 240387322 240387335 ZBED1 JASPAR yes 82244027
chr2 240387358 240387365 NKX3-1 JASPAR yes 22246849
chr2 240387358 240387365 NKX3-1 JASPAR yes 82244028
chr2 240387358 240387374 POU4F2 JASPAR yes 22246850
chr2 240387358 240387374 POU4F2 JASPAR yes 82244029
chr2 240387373 240387383 MSC JASPAR yes 22246851
chr2 240387373 240387383 TFAP4 JASPAR yes 22246852
chr2 240387373 240387383 MSC JASPAR yes 82244030
chr2 240387373 240387383 TFAP4 JASPAR yes 82244031
chr2 240387395 240387406 ELK4 JASPAR yes 22246853
chr2 240387395 240387406 FLI1 JASPAR yes 22246854
chr2 240387395 240387406 ELK4 JASPAR yes 82244032
chr2 240387395 240387406 FLI1 JASPAR yes 82244033
chr2 240387396 240387406 ERF JASPAR yes 22246855
chr2 240387396 240387406 ETS1 JASPAR yes 22246856
chr2 240387396 240387406 ERF JASPAR yes 82244034
chr2 240387396 240387406 ETS1 JASPAR yes 82244035
chr2 240387396 240387407 ETV2 JASPAR yes 22246857
chr2 240387396 240387407 ETV2 JASPAR yes 82244036
chr2 240387405 240387419 TLX1 JASPAR yes 22246858
chr2 240387405 240387419 TLX1 JASPAR yes 82244037
chr2 240387446 240387459 NR2F1 JASPAR yes 22246859
chr2 240387446 240387459 NR2F1 JASPAR yes 82244038
chr2 240387476 240387486 SP1 JASPAR yes 22246860
chr2 240387476 240387486 SP1 JASPAR yes 82244039
chr2 240387486 240387500 SPI1 JASPAR yes 22246861
chr2 240387486 240387500 SPI1 JASPAR yes 82244040
chr2 240387491 240387511 ESR1 JASPAR yes 22246862
chr2 240387491 240387511 ESR1 JASPAR yes 82244041
chr2 240387500 240387511 NRF1 JASPAR yes 22246863
chr2 240387500 240387511 NRF1 JASPAR yes 82244042
chr2 240387504 240387510 NFE2 TRANSFAC yes 22246864
chr2 240387504 240387510 NFE2 TRANSFAC yes 82244043
chr2 240387539 240387560 REST JASPAR yes 22246865
chr2 240387539 240387560 REST JASPAR yes 82244044
chr2 240387540 240387559 REST JASPAR yes 22246866
chr2 240387540 240387559 REST JASPAR yes 82244045
chr2 240387572 240387592 TP53 JASPAR yes 22246867
chr2 240387572 240387592 TP53 JASPAR yes 82244046
chr2 240387579 240387589 RELA JASPAR yes 22246868
chr2 240387579 240387589 RELA JASPAR yes 82244047
chr2 240387584 240387599 TFAP2A JASPAR yes 22246869
chr2 240387584 240387599 TFAP2C JASPAR yes 22246870
chr2 240387584 240387599 TFAP2A JASPAR yes 82244048
chr2 240387584 240387599 TFAP2C JASPAR yes 82244049
chr2 240387585 240387596 EBF1 JASPAR yes 22246871
chr2 240387585 240387596 TFAP2A JASPAR yes 22246872
chr2 240387585 240387596 TFAP2B JASPAR yes 22246873
chr2 240387585 240387596 TFAP2C JASPAR yes 22246874
chr2 240387585 240387596 EBF1 JASPAR yes 82244050
chr2 240387585 240387596 TFAP2A JASPAR yes 82244051
chr2 240387585 240387596 TFAP2B JASPAR yes 82244052
chr2 240387585 240387596 TFAP2C JASPAR yes 82244053
chr2 240387586 240387595 TFAP2A JASPAR yes 22246875
chr2 240387586 240387595 TFAP2A JASPAR yes 82244054
chr2 240387589 240387599 SP1 JASPAR yes 22246876
chr2 240387589 240387599 SP1 JASPAR yes 82244055
chr2 240387590 240387598 SP1 TRANSFAC yes 22246877
chr2 240387590 240387598 SP1 TRANSFAC yes 82244056
chr2 240387590 240387599 SP1 TRANSFAC yes 22246878
chr2 240387590 240387599 SP1 TRANSFAC yes 82244057
chr2 240387591 240387596 SP1 TRANSFAC yes 22246879
chr2 240387591 240387596 SP1 TRANSFAC yes 82244058
chr2 240387592 240387597 SP1 TRANSFAC yes 22246880
chr2 240387592 240387597 SP1 TRANSFAC yes 82244059
chr2 240387592 240387598 SP1 TRANSFAC yes 22246881
chr2 240387592 240387598 SP1 TRANSFAC yes 82244060
chr2 240387595 240387600 SP1 TRANSFAC yes 22246882
chr2 240387595 240387600 SP1 TRANSFAC yes 82244061
chr2 240387616 240387619 MYB TRANSFAC yes 22246883
chr2 240387616 240387619 MYB TRANSFAC yes 82244062
chr2 240387631 240387639 TBX15 JASPAR yes 22246884
chr2 240387631 240387639 TBX1 JASPAR yes 22246885
chr2 240387631 240387639 TBX4 JASPAR yes 22246886
chr2 240387631 240387639 TBX5 JASPAR yes 22246887
chr2 240387631 240387639 TBX15 JASPAR yes 82244063
chr2 240387631 240387639 TBX1 JASPAR yes 82244064
chr2 240387631 240387639 TBX4 JASPAR yes 82244065
chr2 240387631 240387639 TBX5 JASPAR yes 82244066
chr2 240387631 240387643 PKNOX1 JASPAR yes 22246888
chr2 240387631 240387643 PKNOX2 JASPAR yes 22246889
chr2 240387631 240387643 PKNOX1 JASPAR yes 82244067
chr2 240387631 240387643 PKNOX2 JASPAR yes 82244068
chr2 240387632 240387642 ID4 JASPAR yes 22246890
chr2 240387632 240387642 MSC JASPAR yes 22246891
chr2 240387632 240387642 TCF3 JASPAR yes 22246892
chr2 240387632 240387642 ID4 JASPAR yes 82244069
chr2 240387632 240387642 MSC JASPAR yes 82244070
chr2 240387632 240387642 TCF3 JASPAR yes 82244071
chr2 240387633 240387642 SNAI2 JASPAR yes 22246893
chr2 240387633 240387642 SNAI2 JASPAR yes 82244072
chr2 240387634 240387639 USF2 TRANSFAC yes 22246894
chr2 240387634 240387639 USF2 TRANSFAC yes 82244073
SNP sites on vista35523[chr2:240387329-240387689]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240387390 rs4374398 C T no 6495433
chr2 240387391 rs76558311 G A no 6495434
chr2 240387414 rs60034436 C T
TLX1
6495435
chr2 240387430 rs542462686 C T no 6495436
chr2 240387456 rs114546626 C T
NR2F1
6495437
chr2 240387463 rs56297639 T C no 6495438
chr2 240387474 rs57267247 C T no 6495439
chr2 240387480 rs531962981 C T
SP1
6495440
chr2 240387575 rs748599 A G
TP53
6495441
chr2 240387596 rs74000849 G A
EBF1 SP1 TFAP2A TFAP2B TFAP2C
6495442
chr2 240387624 rs182076272 C G no 6495443
chr2 240387672 rs112171709 T A,G no 6495444
Genes possibly regulated by vista35523[chr2:240387329-240387689]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239969864 240323348 - HDAC4 ENSG00000068024.12 240323348 0.76 1.0 3309 36019
chr2 240323130 240324058 + AC062017.1 ENSG00000222020.2 240323130 0.65 1.0 3311 35801
Expression level of Genes
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miRNAs possibly regulated by vista35523[chr2:240387329-240387689]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results