EnhancerDB
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  3. vista35525[chr2:240422114-240422344]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35525[chr2:240422114-240422344]
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Tissue distribution of vista35525
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Transcription factor that possibly regulate vista35525[chr2:240422114-240422344]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 240422136 240422151 RUNX2 JASPAR yes 22246929
chr2 240422136 240422151 RUNX2 JASPAR yes 82244857
chr2 240422145 240422159 FOXF2 JASPAR yes 22246930
chr2 240422145 240422159 FOXF2 JASPAR yes 82244858
chr2 240422146 240422157 HOXC13 JASPAR yes 22246931
chr2 240422146 240422157 HOXD12 JASPAR yes 22246932
chr2 240422146 240422157 HOXC13 JASPAR yes 82244859
chr2 240422146 240422157 HOXD12 JASPAR yes 82244860
chr2 240422147 240422157 HOXA13 JASPAR yes 22246933
chr2 240422147 240422157 HOXD13 JASPAR yes 22246934
chr2 240422147 240422157 HOXA13 JASPAR yes 82244861
chr2 240422147 240422157 HOXD13 JASPAR yes 82244862
chr2 240422150 240422158 FOXG1 JASPAR yes 22246935
chr2 240422150 240422158 FOXO3 JASPAR yes 22246936
chr2 240422150 240422158 FOXG1 JASPAR yes 82244863
chr2 240422150 240422158 FOXO3 JASPAR yes 82244864
chr2 240422164 240422177 ELF1 JASPAR yes 22246937
chr2 240422164 240422177 ELF1 JASPAR yes 82244865
chr2 240422165 240422177 EHF JASPAR yes 22246938
chr2 240422165 240422177 ELF1 JASPAR yes 22246939
chr2 240422165 240422177 ELF4 JASPAR yes 22246940
chr2 240422165 240422177 EHF JASPAR yes 82244866
chr2 240422165 240422177 ELF1 JASPAR yes 82244867
chr2 240422165 240422177 ELF4 JASPAR yes 82244868
chr2 240422166 240422177 ELF5 JASPAR yes 22246941
chr2 240422166 240422177 ELF5 JASPAR yes 82244869
chr2 240422168 240422176 EHF JASPAR yes 22246942
chr2 240422168 240422176 EHF JASPAR yes 82244870
chr2 240422169 240422176 SPI1 JASPAR yes 22246943
chr2 240422169 240422176 SPI1 JASPAR yes 82244871
chr2 240422184 240422188 LFA1 TRANSFAC yes 22246944
chr2 240422184 240422188 LFA1 TRANSFAC yes 82244872
chr2 240422185 240422201 RFX4 JASPAR yes 22246945
chr2 240422185 240422201 RFX4 JASPAR yes 82244873
chr2 240422186 240422205 RFX2 JASPAR yes 22246946
chr2 240422186 240422205 RFX2 JASPAR yes 82244874
chr2 240422192 240422211 CTCF JASPAR yes 22246947
chr2 240422192 240422211 CTCF JASPAR yes 82244875
chr2 240422193 240422197 LFA1 TRANSFAC yes 22246948
chr2 240422193 240422197 LFA1 TRANSFAC yes 82244876
chr2 240422202 240422219 RXRA JASPAR yes 22246949
chr2 240422202 240422219 RXRA JASPAR yes 82244877
chr2 240422203 240422207 LFA1 TRANSFAC yes 22246950
chr2 240422203 240422207 LFA1 TRANSFAC yes 82244878
chr2 240422208 240422229 ZNF263 JASPAR yes 22246951
chr2 240422208 240422229 ZNF263 JASPAR yes 82244879
chr2 240422264 240422284 TBX19 JASPAR yes 22246952
chr2 240422264 240422284 TBX19 JASPAR yes 82244880
chr2 240422266 240422282 T JASPAR yes 22246953
chr2 240422266 240422282 T JASPAR yes 82244881
chr2 240422285 240422295 MSC JASPAR yes 22246954
chr2 240422285 240422295 MSC JASPAR yes 82244882
chr2 240422299 240422311 GLI2 JASPAR yes 22246955
chr2 240422299 240422311 GLI2 JASPAR yes 82244883
chr2 240422299 240422314 RUNX2 JASPAR yes 22246956
chr2 240422299 240422314 RUNX2 JASPAR yes 82244884
chr2 240422338 240422356 NR3C1 JASPAR yes 22246957
chr2 240422338 240422356 NR3C1 JASPAR yes 82244885
chr2 240422339 240422354 SCRT1 JASPAR yes 22246958
chr2 240422339 240422354 SCRT1 JASPAR yes 82244886
chr2 240422341 240422354 SCRT2 JASPAR yes 22246959
chr2 240422341 240422354 SCRT2 JASPAR yes 82244887
SNP sites on vista35525[chr2:240422114-240422344]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 240422236 rs10451617 C T no 6495551
chr2 240422301 rs150677280 T A
GLI2 RUNX2
6495552
chr2 240422305 rs73005381 C A
GLI2 RUNX2
6495553
chr2 240422306 rs78217881 A G
GLI2 RUNX2
6495554
chr2 240422314 rs2708192 A G
RUNX2
6495555
chr2 240422317 rs191311127 C T no 6495556
Genes possibly regulated by vista35525[chr2:240422114-240422344]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 239969864 240323348 - HDAC4 ENSG00000068024.12 240323348 0.76 1.0 3309 1234
chr2 240323130 240324058 + AC062017.1 ENSG00000222020.2 240323130 0.65 1.0 3311 1016
chr2 240499995 240507788 + AC079612.1 ENSG00000196758.3 240499995 1.0 0.0 3312 22349
Expression level of Genes
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miRNAs possibly regulated by vista35525[chr2:240422114-240422344]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results