EnhancerDB
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  3. vista35547[chr2:241313615-241314182]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35547[chr2:241313615-241314182]
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Tissue distribution of vista35547
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Transcription factor that possibly regulate vista35547[chr2:241313615-241314182]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241313988 241314272 NR3C1 UCSC Txn Factor no Conserved 108436043
chr2 241313657 241313663 YY1 JASPAR yes 22247863
chr2 241313657 241313663 YY1 JASPAR yes 82280036
chr2 241313668 241313683 JUND JASPAR yes 22247864
chr2 241313668 241313683 JUND JASPAR yes 82280037
chr2 241313669 241313682 JUN JASPAR yes 22247865
chr2 241313669 241313682 JUN JASPAR yes 82280038
chr2 241313670 241313684 ATF7 JASPAR yes 22247866
chr2 241313670 241313684 BATF3 JASPAR yes 22247867
chr2 241313670 241313684 ATF7 JASPAR yes 82280039
chr2 241313670 241313684 BATF3 JASPAR yes 82280040
chr2 241313671 241313683 JDP2 JASPAR yes 22247868
chr2 241313671 241313683 JDP2 JASPAR yes 82280041
chr2 241313671 241313686 JUND JASPAR yes 22247869
chr2 241313671 241313686 JUND JASPAR yes 82280042
chr2 241313709 241313721 GLI2 JASPAR yes 22247870
chr2 241313709 241313721 GLI2 JASPAR yes 82280043
chr2 241313724 241313739 TFAP2A JASPAR yes 22247871
chr2 241313724 241313739 TFAP2A JASPAR yes 82280044
chr2 241313746 241313752 SP1 TRANSFAC yes 22247872
chr2 241313746 241313752 SP1 TRANSFAC yes 82280045
chr2 241313746 241313756 SP1 JASPAR yes 22247873
chr2 241313746 241313756 SP1 JASPAR yes 82280046
chr2 241313750 241313761 EBF1 JASPAR yes 22247874
chr2 241313750 241313761 EBF1 JASPAR yes 82280047
chr2 241313763 241313784 ZNF263 JASPAR yes 22247875
chr2 241313763 241313784 ZNF263 JASPAR yes 82280048
chr2 241313766 241313787 ZNF263 JASPAR yes 22247876
chr2 241313766 241313787 ZNF263 JASPAR yes 82280049
chr2 241313769 241313779 SP1 JASPAR yes 22247877
chr2 241313769 241313779 SP1 JASPAR yes 82280050
chr2 241313772 241313782 MZF1 JASPAR yes 22247878
chr2 241313772 241313782 MZF1 JASPAR yes 82280051
chr2 241313775 241313780 TFAP2A TRANSFAC yes 22247879
chr2 241313775 241313780 TFAP2A TRANSFAC yes 82280052
chr2 241313775 241313781 MZF1 JASPAR yes 22247880
chr2 241313775 241313781 MZF1 JASPAR yes 82280053
chr2 241313805 241313824 REST JASPAR yes 22247881
chr2 241313805 241313824 REST JASPAR yes 82280054
chr2 241313807 241313822 TFAP2A JASPAR yes 22247882
chr2 241313807 241313822 TFAP2A JASPAR yes 82280055
chr2 241313809 241313824 TFAP2C JASPAR yes 22247883
chr2 241313809 241313824 TFAP2C JASPAR yes 82280056
chr2 241313810 241313821 TFAP2A JASPAR yes 22247884
chr2 241313810 241313821 TFAP2B JASPAR yes 22247885
chr2 241313810 241313821 TFAP2C JASPAR yes 22247886
chr2 241313810 241313821 TFAP2A JASPAR yes 82280057
chr2 241313810 241313821 TFAP2B JASPAR yes 82280058
chr2 241313810 241313821 TFAP2C JASPAR yes 82280059
chr2 241313811 241313820 TFAP2A JASPAR yes 22247887
chr2 241313811 241313820 TFAP2A JASPAR yes 82280060
chr2 241313815 241313820 SP1 TRANSFAC yes 22247888
chr2 241313815 241313820 SP1 TRANSFAC yes 82280061
chr2 241313816 241313831 TFAP2C JASPAR yes 22247889
chr2 241313816 241313831 TFAP2C JASPAR yes 82280062
chr2 241313826 241313841 TFAP2C JASPAR yes 22247890
chr2 241313826 241313841 TFAP2C JASPAR yes 82280063
chr2 241313851 241313864 NFKB1 JASPAR yes 22247891
chr2 241313851 241313864 NFKB2 JASPAR yes 22247892
chr2 241313851 241313864 NFKB1 JASPAR yes 82280064
chr2 241313851 241313864 NFKB2 JASPAR yes 82280065
chr2 241313852 241313862 NFKB1 JASPAR yes 22247893
chr2 241313852 241313862 RELA JASPAR yes 22247894
chr2 241313852 241313862 REL JASPAR yes 22247895
chr2 241313852 241313862 NFKB1 JASPAR yes 82280066
chr2 241313852 241313862 RELA JASPAR yes 82280067
chr2 241313852 241313862 REL JASPAR yes 82280068
chr2 241313852 241313863 NFKB1 JASPAR yes 22247896
chr2 241313852 241313863 NFKB1 JASPAR yes 82280069
chr2 241313853 241313863 NFKB1 JASPAR yes 22247897
chr2 241313853 241313863 NFKB1 JASPAR yes 82280070
chr2 241313854 241313871 BCL6B JASPAR yes 22247898
chr2 241313854 241313871 BCL6B JASPAR yes 82280071
chr2 241313856 241313870 EBF1 JASPAR yes 22247899
chr2 241313856 241313870 EBF1 JASPAR yes 82280072
chr2 241313862 241313867 TFAP2A TRANSFAC yes 22247900
chr2 241313862 241313867 TFAP2A TRANSFAC yes 82280073
chr2 241313862 241313868 MZF1 JASPAR yes 22247901
chr2 241313862 241313868 MZF1 JASPAR yes 82280074
chr2 241313886 241313890 NFE TRANSFAC yes 22247902
chr2 241313886 241313890 NFE TRANSFAC yes 82280075
chr2 241313895 241313903 MEIS2 JASPAR yes 22247903
chr2 241313895 241313903 MEIS3 JASPAR yes 22247904
chr2 241313895 241313903 MEIS2 JASPAR yes 82280076
chr2 241313895 241313903 MEIS3 JASPAR yes 82280077
chr2 241313896 241313900 NFE TRANSFAC yes 22247905
chr2 241313896 241313900 NFE TRANSFAC yes 82280078
chr2 241313900 241313904 YY1 TRANSFAC yes 22247906
chr2 241313900 241313904 YY1 TRANSFAC yes 82280079
chr2 241313930 241313940 SP1 JASPAR yes 22247907
chr2 241313930 241313940 SP1 JASPAR yes 82280080
chr2 241313931 241313939 SP1 TRANSFAC yes 22247908
chr2 241313931 241313939 SP1 TRANSFAC yes 82280081
chr2 241314004 241314019 TFAP2A JASPAR yes 22247909
chr2 241314004 241314019 TFAP2C JASPAR yes 22247910
chr2 241314004 241314019 TFAP2A JASPAR yes 82280082
chr2 241314004 241314019 TFAP2C JASPAR yes 82280083
chr2 241314006 241314015 TFAP2A JASPAR yes 22247911
chr2 241314006 241314015 TFAP2A JASPAR yes 82280084
chr2 241314013 241314018 SP1 TRANSFAC yes 22247912
chr2 241314013 241314018 SP1 TRANSFAC yes 82280085
chr2 241314016 241314021 SP1 TRANSFAC yes 22247913
chr2 241314016 241314021 SP1 TRANSFAC yes 82280086
chr2 241314024 241314038 EBF1 JASPAR yes 22247914
chr2 241314024 241314038 EBF1 JASPAR yes 82280087
chr2 241314026 241314037 EBF1 JASPAR yes 22247915
chr2 241314026 241314037 EBF1 JASPAR yes 82280088
chr2 241314030 241314043 ELF1 JASPAR yes 22247916
chr2 241314030 241314043 ELF1 JASPAR yes 82280089
chr2 241314033 241314039 PEA3 TRANSFAC yes 22247917
chr2 241314033 241314039 PEA3 TRANSFAC yes 82280090
chr2 241314033 241314043 ETV6 JASPAR yes 22247918
chr2 241314033 241314043 ETV6 JASPAR yes 82280091
chr2 241314033 241314044 ELK4 JASPAR yes 22247919
chr2 241314033 241314044 FLI1 JASPAR yes 22247920
chr2 241314033 241314044 ELK4 JASPAR yes 82280092
chr2 241314033 241314044 FLI1 JASPAR yes 82280093
chr2 241314034 241314042 EHF JASPAR yes 22247921
chr2 241314034 241314042 EHF JASPAR yes 82280094
chr2 241314035 241314042 SPI1 JASPAR yes 22247922
chr2 241314035 241314042 SPI1 JASPAR yes 82280095
chr2 241314067 241314074 CEBPA TRANSFAC yes 22247923
chr2 241314067 241314074 CEBPA TRANSFAC yes 82280096
chr2 241314077 241314090 SMAD2 JASPAR yes 22247924
chr2 241314077 241314090 SMAD2 JASPAR yes 82280097
chr2 241314092 241314109 RARA JASPAR yes 22247925
chr2 241314092 241314109 RARA JASPAR yes 82280098
chr2 241314093 241314097 ESR1 TRANSFAC yes 22247926
chr2 241314093 241314097 ESR1 TRANSFAC yes 82280099
chr2 241314102 241314119 NR3C2 JASPAR yes 22247927
chr2 241314102 241314119 NR3C2 JASPAR yes 82280100
chr2 241314117 241314129 HES7 JASPAR yes 22247928
chr2 241314117 241314129 HES7 JASPAR yes 82280101
chr2 241314144 241314159 RUNX2 JASPAR yes 22247929
chr2 241314144 241314159 RUNX2 JASPAR yes 82280102
chr2 241314161 241314182 REST JASPAR yes 22247930
chr2 241314161 241314182 REST JASPAR yes 82280103
chr2 241314165 241314169 NFE TRANSFAC yes 22247931
chr2 241314165 241314169 NFE TRANSFAC yes 82280104
SNP sites on vista35547[chr2:241313615-241314182]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241313667 rs116720184 G A no 6500330
chr2 241313686 rs114852077 G C
JUND
6500331
chr2 241313712 rs2352844 G A
GLI2
6500332
chr2 241313770 rs186077208 G A
SP1 ZNF263
6500333
chr2 241313785 rs74001575 G A,T
ZNF263
6500334
chr2 241313787 rs116558446 C T
ZNF263
6500335
chr2 241313795 rs2352845 G A no 6500336
chr2 241313864 rs79625320 G A
BCL6B EBF1 MZF1 NFKB1 NFKB2 TFAP2A
6500337
chr2 241313886 rs556460583 G A
NFE
6500338
chr2 241313923 rs191623580 G A no 6500339
chr2 241313960 rs149389589 C G no 6500340
chr2 241313973 rs114240271 G A no 6500341
chr2 241314014 rs73114078 G A
NR3C1 SP1 TFAP2A TFAP2C
6500342
chr2 241314114 rs530115510 G A
NR3C1 NR3C2
6500343
chr2 241314182 rs564943621 A T
NR3C1 REST
6500344
Genes possibly regulated by vista35547[chr2:241313615-241314182]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241375088 241407493 + GPC1 ENSG00000063660.4 241375088 0.61 1.0 3321 39094
chr2 241388732 241396131 - AC110619.2 ENSG00000218416.3 241396131 0.96 1.0 3322 18051
Expression level of Genes
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miRNAs possibly regulated by vista35547[chr2:241313615-241314182]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 241395473 241395493 + hsa-miR-149-3p MIMAT0004609 241375106 6.53466640528001e-05 0.913792 0.570949 1028
Expression level of miRNAs
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