EnhancerDB
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  3. vista35548[chr2:241366341-241366661]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35548[chr2:241366341-241366661]
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Tissue distribution of vista35548
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Transcription factor that possibly regulate vista35548[chr2:241366341-241366661]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241366326 241366347 ZNF263 JASPAR yes 22247932
chr2 241366326 241366347 ZNF263 JASPAR yes 82284715
chr2 241366329 241366342 ELF1 JASPAR yes 22247933
chr2 241366329 241366342 ELF1 JASPAR yes 82284716
chr2 241366332 241366353 ZNF263 JASPAR yes 22247934
chr2 241366332 241366353 ZNF263 JASPAR yes 82284718
chr2 241366333 241366354 ZNF263 JASPAR yes 22247935
chr2 241366333 241366354 ZNF263 JASPAR yes 82284719
chr2 241366335 241366356 ZNF263 JASPAR yes 22247936
chr2 241366335 241366356 ZNF263 JASPAR yes 82284720
chr2 241366355 241366364 TFAP2A JASPAR yes 22247937
chr2 241366355 241366364 TFAP2A JASPAR yes 82284721
chr2 241366364 241366370 MYC TRANSFAC yes 22247938
chr2 241366364 241366370 MYC TRANSFAC yes 82284722
chr2 241366382 241366397 ZBTB33 JASPAR yes 22247939
chr2 241366382 241366397 ZBTB33 JASPAR yes 82284723
chr2 241366395 241366398 MYB TRANSFAC yes 22247940
chr2 241366395 241366398 MYB TRANSFAC yes 82284724
chr2 241366422 241366440 RARA JASPAR yes 22247941
chr2 241366422 241366440 RARA JASPAR yes 82284725
chr2 241366424 241366436 CREB1 JASPAR yes 22247942
chr2 241366424 241366436 CREB1 JASPAR yes 82284726
chr2 241366424 241366439 JUND JASPAR yes 22247943
chr2 241366424 241366439 JUND JASPAR yes 82284727
chr2 241366425 241366438 JUN JASPAR yes 22247944
chr2 241366425 241366438 JUN JASPAR yes 82284728
chr2 241366426 241366440 ATF7 JASPAR yes 22247945
chr2 241366426 241366440 BATF3 JASPAR yes 22247946
chr2 241366426 241366440 CREB3 JASPAR yes 22247947
chr2 241366426 241366440 ATF7 JASPAR yes 82284729
chr2 241366426 241366440 BATF3 JASPAR yes 82284730
chr2 241366426 241366440 CREB3 JASPAR yes 82284731
chr2 241366427 241366439 JDP2 JASPAR yes 22247948
chr2 241366427 241366439 JDP2 JASPAR yes 82284732
chr2 241366429 241366434 ATF1 TRANSFAC yes 22247949
chr2 241366429 241366434 ATF1 TRANSFAC yes 82284733
chr2 241366429 241366437 CREB1 JASPAR yes 22247950
chr2 241366429 241366437 CREB1 JASPAR yes 82284734
chr2 241366430 241366442 CREB1 JASPAR yes 22247951
chr2 241366430 241366442 CREB1 JASPAR yes 82284735
chr2 241366431 241366436 ATF1 TRANSFAC yes 22247952
chr2 241366431 241366436 ATF1 TRANSFAC yes 82284736
chr2 241366450 241366454 H4TF2 TRANSFAC yes 22247953
chr2 241366450 241366454 H4TF2 TRANSFAC yes 82284737
chr2 241366471 241366485 GLIS2 JASPAR yes 22247954
chr2 241366471 241366485 GLIS3 JASPAR yes 22247955
chr2 241366471 241366485 GLIS2 JASPAR yes 82284738
chr2 241366471 241366485 GLIS3 JASPAR yes 82284739
chr2 241366471 241366486 ZIC3 JASPAR yes 22247956
chr2 241366471 241366486 ZIC4 JASPAR yes 22247957
chr2 241366471 241366486 ZIC3 JASPAR yes 82284740
chr2 241366471 241366486 ZIC4 JASPAR yes 82284741
chr2 241366474 241366490 ZNF143 JASPAR yes 22247958
chr2 241366474 241366490 ZNF143 JASPAR yes 82284742
chr2 241366475 241366489 PLAG1 JASPAR yes 22247959
chr2 241366475 241366489 PLAG1 JASPAR yes 82284743
chr2 241366500 241366505 TFAP2A TRANSFAC yes 22247960
chr2 241366500 241366505 TFAP2A TRANSFAC yes 82284744
chr2 241366500 241366506 MZF1 JASPAR yes 22247961
chr2 241366500 241366506 MZF1 JASPAR yes 82284745
chr2 241366509 241366513 YY1 TRANSFAC yes 22247962
chr2 241366509 241366513 YY1 TRANSFAC yes 82284746
chr2 241366511 241366524 SCRT2 JASPAR yes 22247963
chr2 241366511 241366524 SCRT2 JASPAR yes 82284747
chr2 241366528 241366543 STAT2 JASPAR yes 22247964
chr2 241366528 241366543 STAT2 JASPAR yes 82284748
chr2 241366558 241366568 HMBOX1 JASPAR yes 22247965
chr2 241366558 241366568 HMBOX1 JASPAR yes 82284749
chr2 241366560 241366563 MYB TRANSFAC yes 22247966
chr2 241366560 241366563 MYB TRANSFAC yes 82284750
chr2 241366583 241366594 NFIL3 JASPAR yes 22247967
chr2 241366583 241366594 NFIL3 JASPAR yes 82284751
chr2 241366588 241366591 MYB TRANSFAC yes 22247968
chr2 241366588 241366591 MYB TRANSFAC yes 82284752
chr2 241366595 241366615 TP53 JASPAR yes 22247969
chr2 241366595 241366615 TP53 JASPAR yes 82284753
chr2 241366598 241366610 TEAD1 JASPAR yes 22247970
chr2 241366598 241366610 TEAD1 JASPAR yes 82284754
chr2 241366605 241366615 RELA JASPAR yes 22247971
chr2 241366605 241366615 RELA JASPAR yes 82284755
chr2 241366610 241366623 ZBTB18 JASPAR yes 22247972
chr2 241366610 241366623 ZBTB18 JASPAR yes 82284756
chr2 241366638 241366642 NFE TRANSFAC yes 22247973
chr2 241366638 241366642 NFE TRANSFAC yes 82284757
chr2 241366654 241366659 GATA2 JASPAR yes 22247974
chr2 241366654 241366659 GATA2 JASPAR yes 82284758
SNP sites on vista35548[chr2:241366341-241366661]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241366342 rs530463256 G C
ELF1 ZNF263
6500994
chr2 241366360 rs1573784 T C
TFAP2A
6500995
chr2 241366373 rs74001609 A G no 6500996
chr2 241366397 rs529425112 AACTC A
MYB ZBTB33
6500997
chr2 241366405 rs568643177 G A,C no 6500998
chr2 241366420 rs1573785 G A no 6500999
chr2 241366458 rs76309704 C T no 6501000
chr2 241366503 rs182402148 G A
MZF1 TFAP2A
6501001
chr2 241366534 rs1573782 A T
STAT2
6501002
chr2 241366559 rs541512927 C A
HMBOX1
6501003
chr2 241366623 rs7560829 T C
ZBTB18
6501004
Genes possibly regulated by vista35548[chr2:241366341-241366661]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241375088 241407493 + GPC1 ENSG00000063660.4 241375088 0.61 1.0 3321 91573
chr2 241388732 241396131 - AC110619.2 ENSG00000218416.3 241396131 0.96 1.0 3322 70530
Expression level of Genes
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miRNAs possibly regulated by vista35548[chr2:241366341-241366661]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 241395473 241395493 + hsa-miR-149-3p MIMAT0004609 241375106 0.00046463003833197816 0.913792 0.570949 1028
Expression level of miRNAs
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