EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr2	241373208	241375394	POLR2A	UCSC Txn Factor	no	Conserved	108436044
chr2	241373208	241375394	POLR2A	UCSC Txn Factor	no	Conserved	108436045
chr2	241373438	241373849	FOS	UCSC Txn Factor	no	Conserved	108436046
chr2	241373470	241373725	FOSL2	UCSC Txn Factor	no	Conserved	108436047
chr2	241373511	241373531	TP63	JASPAR	yes		22247975
chr2	241373512	241373530	TP63	JASPAR	yes		22247976
chr2	241373525	241373540	TFAP2C	JASPAR	yes		22247977
chr2	241373550	241373564	JUN	JASPAR	yes		22247978
chr2	241373553	241373564	FOSL2	JASPAR	yes		22247979
chr2	241373553	241373564	JUNB	JASPAR	yes		22247980
chr2	241373554	241373565	FOS	JASPAR	yes		22247981
chr2	241373554	241373565	FOSL1	JASPAR	yes		22247982
chr2	241373554	241373565	JUND	JASPAR	yes		22247983
chr2	241373554	241373565	NFE2	JASPAR	yes		22247984
chr2	241373555	241373564	JDP2	JASPAR	yes		22247985
chr2	241373555	241373566	FOSL2	JASPAR	yes		22247986
chr2	241373555	241373566	JUNB	JASPAR	yes		22247987
chr2	241373555	241373569	JUN	JASPAR	yes		22247988
chr2	241373569	241373580	NFE2L2	JASPAR	yes		22247989
chr2	241373573	241373587	ZIC1	JASPAR	yes		22247990
chr2	241373580	241373594	PLAG1	JASPAR	yes		22247991
chr2	241373588	241373598	ZNF740	JASPAR	yes		22247992
chr2	241373590	241373600	SP1	JASPAR	yes		22247993
chr2	241373590	241373611	ZNF263	JASPAR	yes		22247994
chr2	241373592	241373598	MAZ	TRANSFAC	yes		22247995
chr2	241373596	241373600	LFA1	TRANSFAC	yes		22247996
chr2	241373617	241373622	NFY	TRANSFAC	yes		22247997
chr2	241373622	241373626	H4TF2	TRANSFAC	yes		22247998
chr2	241373624	241373630	MZF1	JASPAR	yes		22247999
chr2	241373632	241373643	E2F6	JASPAR	yes		22248000
chr2	241373643	241373657	JUN	JASPAR	yes		22248001
chr2	241373645	241373656	BATF	JASPAR	yes		22248002
chr2	241373646	241373657	FOSL2	JASPAR	yes		22248003
chr2	241373646	241373657	JUNB	JASPAR	yes		22248004
chr2	241373647	241373658	FOS	JASPAR	yes		22248005
chr2	241373647	241373658	FOSL1	JASPAR	yes		22248006
chr2	241373647	241373658	JUND	JASPAR	yes		22248007
chr2	241373647	241373658	NFE2	JASPAR	yes		22248008
chr2	241373648	241373657	JDP2	JASPAR	yes		22248009
chr2	241373648	241373659	JUNB	JASPAR	yes		22248010
chr2	241373648	241373662	JUN	JASPAR	yes		22248011
chr2	241373649	241373660	BATF	JASPAR	yes		22248012
chr2	241373687	241373697	SP1	JASPAR	yes		22248013
chr2	241373693	241373708	ESR2	JASPAR	yes		22248014
chr2	241373694	241373698	LFA1	TRANSFAC	yes		22248015
chr2	241373698	241373709	NFKB1	JASPAR	yes		22248016
chr2	241373699	241373709	RELA	JASPAR	yes		22248017
chr2	241373699	241373709	REL	JASPAR	yes		22248018
chr2	241373711	241373726	TFAP2C	JASPAR	yes		22248019
chr2	241373712	241373723	EBF1	JASPAR	yes		22248020
chr2	241373712	241373727	ZIC3	JASPAR	yes		22248021
chr2	241373717	241373727	SP1	JASPAR	yes		22248022
chr2	241373719	241373725	MAZ	TRANSFAC	yes		22248023
chr2	241373723	241373727	LFA1	TRANSFAC	yes		22248024
chr2	241373724	241373745	ZNF263	JASPAR	yes		22248025
chr2	241373730	241373751	ZNF263	JASPAR	yes		22248026
chr2	241373731	241373742	FLI1	JASPAR	yes		22248027
chr2	241373733	241373741	EHF	JASPAR	yes		22248028
chr2	241373745	241373759	GLIS2	JASPAR	yes		22248029
chr2	241373762	241373777	TFAP2C	JASPAR	yes		22248030
chr2	241373763	241373782	REST	JASPAR	yes		22248031
chr2	241373765	241373776	TFAP2A	JASPAR	yes		22248032
chr2	241373765	241373776	TFAP2B	JASPAR	yes		22248033
chr2	241373765	241373776	TFAP2C	JASPAR	yes		22248034
chr2	241373766	241373775	TFAP2A	JASPAR	yes		22248035
chr2	241373800	241373810	ZNF740	JASPAR	yes		22248036
chr2	241373802	241373822	RREB1	JASPAR	yes		22248037
chr2	241373829	241373839	FIGLA	JASPAR	yes		22248038
chr2	241373830	241373845	JUND	JASPAR	yes		22248039
chr2	241373831	241373844	JUN	JASPAR	yes		22248040
chr2	241373832	241373845	ATF4	JASPAR	yes		22248041
chr2	241373879	241373896	RARA	JASPAR	yes		22248042
chr2	241373880	241373884	ESR1	TRANSFAC	yes		22248043
chr2	241373898	241373904	NFIC	JASPAR	yes		22248044
chr2	241373904	241373909	GATA2	JASPAR	yes		22248045
chr2	241373910	241373920	RORA	JASPAR	yes		22248046

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr2	241373502	rs71428435	C	T	FOS FOSL2 POLR2A	6501068
chr2	241373503	rs543415287	G	A,C	FOS FOSL2 POLR2A	6501069
chr2	241373507	rs114560268	G	A	FOS FOSL2 POLR2A	6501070
chr2	241373520	rs114129660	A	G	FOS FOSL2 POLR2A TP63	6501071
chr2	241373531	rs6716265	T	C	FOS FOSL2 POLR2A TFAP2C TP63	6501072
chr2	241373621	rs540355769	TGGGTCCCCAAAGCC	T	FOS FOSL2 NFY POLR2A	6501073
chr2	241373653	rs570206173	CTCAG	C	BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2 POLR2A	6501074
chr2	241373780	rs9973786	A	G	FOS POLR2A REST	6501075
chr2	241373804	rs148527125	C	G	FOS POLR2A RREB1 ZNF740	6501076
chr2	241373813	rs182555539	C	T	FOS POLR2A RREB1	6501077
chr2	241373815	rs142181796	G	C	FOS POLR2A RREB1	6501078
chr2	241373841	rs146239372	C	T	ATF4 FOS JUN JUND POLR2A	6501079
chr2	241373846	rs79537755	G	A	FOS POLR2A	6501080

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr2	241375088	241407493	+	GPC1	ENSG00000063660.4	241375088	0.61	1.0	3321	98834
chr2	241388732	241396131	-	AC110619.2	ENSG00000218416.3	241396131	0.96	1.0	3322	77791

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More
chr2	241395473	241395493	+	hsa-miR-149-3p	MIMAT0004609	241375106	0.0028469750889679717	0.913792	0.570949	1028

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista35549[chr2:241373489-241373922]

Tissue distribution of vista35549

Transcription factor that possibly regulate vista35549[chr2:241373489-241373922]

SNP sites on vista35549[chr2:241373489-241373922]

Genes possibly regulated by vista35549[chr2:241373489-241373922]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista35549[chr2:241373489-241373922]

Details of miRNAs

Expression level of miRNAs