EnhancerDB
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  3. vista35551[chr2:241395144-241395496]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35551[chr2:241395144-241395496]
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Tissue distribution of vista35551
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Transcription factor that possibly regulate vista35551[chr2:241395144-241395496]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241395148 241395162 TLX1 JASPAR yes 22248098
chr2 241395168 241395187 PAX5 JASPAR yes 22248099
chr2 241395174 241395185 E2F4 JASPAR yes 22248100
chr2 241395175 241395183 E2F1 JASPAR yes 22248101
chr2 241395175 241395186 E2F1 JASPAR yes 22248102
chr2 241395179 241395184 SP1 TRANSFAC yes 22248103
chr2 241395206 241395221 NR2C2 JASPAR yes 22248104
chr2 241395210 241395229 CTCF JASPAR yes 22248105
chr2 241395214 241395220 YY1 JASPAR yes 22248106
chr2 241395233 241395248 SCRT1 JASPAR yes 22248107
chr2 241395235 241395248 SCRT2 JASPAR yes 22248108
chr2 241395276 241395281 ETS2 TRANSFAC yes 22248109
chr2 241395281 241395296 ZIC3 JASPAR yes 22248110
chr2 241395281 241395296 ZIC4 JASPAR yes 22248111
chr2 241395282 241395296 ZIC1 JASPAR yes 22248112
chr2 241395284 241395295 E2F4 JASPAR yes 22248113
chr2 241395329 241395343 PLAG1 JASPAR yes 22248114
chr2 241395329 241395344 TFAP2C JASPAR yes 22248115
chr2 241395332 241395343 TFAP2A JASPAR yes 22248116
chr2 241395332 241395343 TFAP2B JASPAR yes 22248117
chr2 241395332 241395344 TFAP2A JASPAR yes 22248118
chr2 241395334 241395345 EBF1 JASPAR yes 22248119
chr2 241395340 241395345 SP1 TRANSFAC yes 22248120
chr2 241395360 241395371 TFAP2A JASPAR yes 22248121
chr2 241395360 241395371 TFAP2B JASPAR yes 22248122
chr2 241395360 241395371 TFAP2C JASPAR yes 22248123
chr2 241395361 241395370 TFAP2A JASPAR yes 22248124
chr2 241395401 241395412 TFAP2A JASPAR yes 22248125
chr2 241395401 241395412 TFAP2B JASPAR yes 22248126
chr2 241395401 241395412 TFAP2C JASPAR yes 22248127
chr2 241395402 241395411 TFAP2A JASPAR yes 22248128
chr2 241395406 241395425 REST JASPAR yes 22248129
chr2 241395463 241395484 ZNF263 JASPAR yes 22248130
chr2 241395464 241395471 CEBPA TRANSFAC yes 22248131
chr2 241395465 241395476 E2F6 JASPAR yes 22248132
chr2 241395467 241395475 SP1 TRANSFAC yes 22248133
chr2 241395467 241395488 ZNF263 JASPAR yes 22248134
chr2 241395469 241395475 MAZ TRANSFAC yes 22248135
chr2 241395469 241395480 E2F6 JASPAR yes 22248136
chr2 241395471 241395479 SP1 TRANSFAC yes 22248137
chr2 241395473 241395479 MAZ TRANSFAC yes 22248138
chr2 241395476 241395486 SP1 JASPAR yes 22248139
SNP sites on vista35551[chr2:241395144-241395496]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241395338 rs185551571 C T
EBF1 PLAG1 TFAP2A TFAP2B TFAP2C
6501343
chr2 241395353 rs12695019 A G no 6501344
chr2 241395393 rs369925154 C G,T no 6501345
chr2 241395420 rs529866043 C T
REST
6501346
Genes possibly regulated by vista35551[chr2:241395144-241395496]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241375088 241407493 + GPC1 ENSG00000063660.4 241375088 0.61 1.0 3321 79944
chr2 241388732 241396131 - AC110619.2 ENSG00000218416.3 241396131 0.96 1.0 3322 99365
Expression level of Genes
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miRNAs possibly regulated by vista35551[chr2:241395144-241395496]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr2 241395473 241395493 + hsa-miR-149-3p MIMAT0004609 241375106 0.0001979218208807521 0.913792 0.570949 1028
Expression level of miRNAs
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