EnhancerDB
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  3. vista35555[chr2:241585712-241586190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35555[chr2:241585712-241586190]
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Tissue distribution of vista35555
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Transcription factor that possibly regulate vista35555[chr2:241585712-241586190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241585727 241585748 IRF1 JASPAR yes 22248260
chr2 241585727 241585748 IRF1 JASPAR yes 82290679
chr2 241585731 241585743 IRF1 JASPAR yes 22248261
chr2 241585731 241585743 IRF1 JASPAR yes 82290680
chr2 241585731 241585745 IRF7 JASPAR yes 22248262
chr2 241585731 241585745 IRF7 JASPAR yes 82290681
chr2 241585731 241585746 IRF9 JASPAR yes 22248263
chr2 241585731 241585746 IRF9 JASPAR yes 82290682
chr2 241585738 241585744 LEF1 TRANSFAC yes 22248264
chr2 241585738 241585744 SOX10 JASPAR yes 22248265
chr2 241585738 241585744 LEF1 TRANSFAC yes 82290683
chr2 241585738 241585744 SOX10 JASPAR yes 82290684
chr2 241585770 241585774 NFE TRANSFAC yes 22248266
chr2 241585770 241585774 NFE TRANSFAC yes 82290685
chr2 241585772 241585782 GABPA JASPAR yes 22248267
chr2 241585772 241585782 GABPA JASPAR yes 82290686
chr2 241585781 241585786 ATF1 TRANSFAC yes 22248268
chr2 241585781 241585786 ATF1 TRANSFAC yes 82290687
chr2 241585788 241585798 GABPA JASPAR yes 22248269
chr2 241585788 241585798 GABPA JASPAR yes 82290688
chr2 241585797 241585802 ATF1 TRANSFAC yes 22248270
chr2 241585797 241585802 ATF1 TRANSFAC yes 82290689
chr2 241585804 241585814 GABPA JASPAR yes 22248271
chr2 241585804 241585814 GABPA JASPAR yes 82290690
chr2 241585813 241585818 ATF1 TRANSFAC yes 22248272
chr2 241585813 241585818 ATF1 TRANSFAC yes 82290691
chr2 241585820 241585830 GABPA JASPAR yes 22248273
chr2 241585820 241585830 GABPA JASPAR yes 82290692
chr2 241585829 241585834 ATF1 TRANSFAC yes 22248274
chr2 241585829 241585834 ATF1 TRANSFAC yes 82290693
chr2 241585836 241585846 GABPA JASPAR yes 22248275
chr2 241585836 241585846 GABPA JASPAR yes 82290694
chr2 241585845 241585850 ATF1 TRANSFAC yes 22248276
chr2 241585845 241585850 ATF1 TRANSFAC yes 82290695
chr2 241585857 241585876 CTCF JASPAR yes 22248277
chr2 241585857 241585876 CTCF JASPAR yes 82290696
chr2 241585899 241585909 SP1 JASPAR yes 22248278
chr2 241585899 241585909 SP1 JASPAR yes 82290697
chr2 241585899 241585919 ESR1 JASPAR yes 22248279
chr2 241585899 241585919 ESR1 JASPAR yes 82290698
chr2 241585949 241585968 CTCF JASPAR yes 22248280
chr2 241585949 241585968 CTCF JASPAR yes 82290699
chr2 241585967 241585971 LFA1 TRANSFAC yes 22248281
chr2 241585967 241585971 LFA1 TRANSFAC yes 82290700
chr2 241585968 241585978 NHLH1 JASPAR yes 22248282
chr2 241585968 241585978 NHLH1 JASPAR yes 82290701
chr2 241585996 241586011 JUND JASPAR yes 22248283
chr2 241585996 241586011 JUND JASPAR yes 82290702
chr2 241585997 241586010 JUN JASPAR yes 22248284
chr2 241585997 241586010 JUN JASPAR yes 82290703
chr2 241585999 241586011 JDP2 JASPAR yes 22248285
chr2 241585999 241586011 JDP2 JASPAR yes 82290704
chr2 241586011 241586022 ESRRA JASPAR yes 22248286
chr2 241586011 241586022 ESRRA JASPAR yes 82290705
chr2 241586017 241586023 SOX10 JASPAR yes 22248287
chr2 241586017 241586023 SOX10 JASPAR yes 82290706
chr2 241586025 241586039 SPI1 JASPAR yes 22248288
chr2 241586025 241586039 SPI1 JASPAR yes 82290707
chr2 241586102 241586113 SPDEF JASPAR yes 22248289
chr2 241586102 241586113 SPDEF JASPAR yes 82290708
chr2 241586103 241586116 ATF4 JASPAR yes 22248290
chr2 241586103 241586116 ATF4 JASPAR yes 82290709
chr2 241586140 241586152 GLI2 JASPAR yes 22248291
chr2 241586140 241586152 ZBTB7C JASPAR yes 22248292
chr2 241586140 241586152 GLI2 JASPAR yes 82290710
chr2 241586140 241586152 ZBTB7C JASPAR yes 82290711
chr2 241586141 241586153 ZBTB7A JASPAR yes 22248293
chr2 241586141 241586153 ZBTB7A JASPAR yes 82290712
chr2 241586143 241586148 SP1 TRANSFAC yes 22248294
chr2 241586143 241586148 SP1 TRANSFAC yes 82290713
chr2 241586157 241586169 IRF1 JASPAR yes 22248295
chr2 241586157 241586169 IRF1 JASPAR yes 82290714
chr2 241586167 241586172 SP1 TRANSFAC yes 22248296
chr2 241586167 241586172 SP1 TRANSFAC yes 82290715
chr2 241586173 241586189 ZNF143 JASPAR yes 22248297
chr2 241586173 241586189 ZNF143 JASPAR yes 82290716
SNP sites on vista35555[chr2:241585712-241586190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241585849 rs571150363 C T
ATF1
6501939
chr2 241585851 rs552966969 T TTGTC no 6501940
chr2 241585895 rs553515355 G T no 6501941
chr2 241585980 rs188197610 G A no 6501942
chr2 241586131 rs180759977 C T no 6501943
chr2 241586140 rs62187760 G A
GLI2 ZBTB7C
6501944
Genes possibly regulated by vista35555[chr2:241585712-241586190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241418839 241508626 - ANKMY1 ENSG00000144504.11 241508626 0.69 1.0 3323 22914
chr2 241499471 241503431 + DUSP28 ENSG00000188542.5 241499471 0.59 1.0 3324 13759
chr2 241505221 241520789 + RNPEPL1 ENSG00000142327.7 241505221 0.68 1.0 3325 19509
chr2 241526133 241557122 + CAPN10 ENSG00000142330.15 241526133 0.62 1.0 3326 40421
chr2 241544848 241570676 + GPR35 ENSG00000178623.7 241544848 0.84 1.0 3327 59136
chr2 241615835 241622323 - AQP12B ENSG00000185176.8 241622323 1.0 0.0 3328 63867
chr2 241624478 241624705 - AC011298.1 ENSG00000268822.1 241624705 0.98 0.0 3329 61485
chr2 241631262 241637900 + AQP12A ENSG00000184945.9 241631262 1.0 0.0 3330 54928
Expression level of Genes
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miRNAs possibly regulated by vista35555[chr2:241585712-241586190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results