EnhancerDB
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  3. vista35558[chr2:241719463-241720148]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35558[chr2:241719463-241720148]
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Tissue distribution of vista35558
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Transcription factor that possibly regulate vista35558[chr2:241719463-241720148]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241719469 241719483 CREB3 JASPAR yes 22248367
chr2 241719469 241719483 CREB3L1 JASPAR yes 22248368
chr2 241719470 241719481 USF2 JASPAR yes 22248369
chr2 241719471 241719481 TFE3 JASPAR yes 22248370
chr2 241719471 241719481 TFEB JASPAR yes 22248371
chr2 241719471 241719481 TFEC JASPAR yes 22248372
chr2 241719471 241719482 USF1 JASPAR yes 22248373
chr2 241719471 241719482 USF2 JASPAR yes 22248374
chr2 241719472 241719482 MAX JASPAR yes 22248375
chr2 241719473 241719478 MYC TRANSFAC yes 22248376
chr2 241719473 241719478 USF1 TRANSFAC yes 22248377
chr2 241719473 241719478 USF2 TRANSFAC yes 22248378
chr2 241719473 241719480 USF1 JASPAR yes 22248379
chr2 241719482 241719496 PLAG1 JASPAR yes 22248380
chr2 241719523 241719529 MZF1 JASPAR yes 22248381
chr2 241719541 241719545 YY1 TRANSFAC yes 22248382
chr2 241719594 241719609 STAT1 JASPAR yes 22248383
chr2 241719596 241719607 STAT1 JASPAR yes 22248384
chr2 241719596 241719607 STAT3 JASPAR yes 22248385
chr2 241719610 241719624 PLAG1 JASPAR yes 22248386
chr2 241719617 241719631 GLIS2 JASPAR yes 22248387
chr2 241719617 241719631 ZIC1 JASPAR yes 22248388
chr2 241719617 241719632 ZIC3 JASPAR yes 22248389
chr2 241719617 241719632 ZIC4 JASPAR yes 22248390
chr2 241719655 241719667 NHLH1 JASPAR yes 22248391
chr2 241719656 241719666 NHLH1 JASPAR yes 22248392
chr2 241719691 241719705 MTF1 JASPAR yes 22248393
chr2 241719702 241719722 RREB1 JASPAR yes 22248394
chr2 241719706 241719726 RREB1 JASPAR yes 22248395
chr2 241719707 241719727 RREB1 JASPAR yes 22248396
chr2 241719709 241719715 SP1 TRANSFAC yes 22248397
chr2 241719718 241719729 ELK4 JASPAR yes 22248398
chr2 241719718 241719729 FLI1 JASPAR yes 22248399
chr2 241719719 241719729 ELK1 JASPAR yes 22248400
chr2 241719719 241719729 ELK3 JASPAR yes 22248401
chr2 241719719 241719729 ERF JASPAR yes 22248402
chr2 241719719 241719729 ERG JASPAR yes 22248403
chr2 241719719 241719729 ETS1 JASPAR yes 22248404
chr2 241719719 241719729 ETV1 JASPAR yes 22248405
chr2 241719719 241719729 ETV3 JASPAR yes 22248406
chr2 241719719 241719729 ETV4 JASPAR yes 22248407
chr2 241719719 241719729 ETV5 JASPAR yes 22248408
chr2 241719719 241719729 ETV6 JASPAR yes 22248409
chr2 241719719 241719729 FEV JASPAR yes 22248410
chr2 241719719 241719729 FLI1 JASPAR yes 22248411
chr2 241719719 241719729 GABPA JASPAR yes 22248412
chr2 241719719 241719730 ETV2 JASPAR yes 22248413
chr2 241719719 241719732 ELF1 JASPAR yes 22248414
chr2 241719721 241719727 ETS1 JASPAR yes 22248415
chr2 241719721 241719727 SPI1 JASPAR yes 22248416
chr2 241719731 241719735 YY1 TRANSFAC yes 22248417
chr2 241719733 241719746 SCRT2 JASPAR yes 22248418
chr2 241719741 241719745 H4TF2 TRANSFAC yes 22248419
chr2 241719772 241719791 CTCF JASPAR yes 22248420
chr2 241719774 241719788 GLIS3 JASPAR yes 22248421
chr2 241719779 241719790 USF2 JASPAR yes 22248422
chr2 241719780 241719790 MAX JASPAR yes 22248423
chr2 241719789 241719795 MZF1 JASPAR yes 22248424
chr2 241719810 241719816 MZF1 JASPAR yes 22248425
chr2 241719822 241719828 MZF1 JASPAR yes 22248426
chr2 241719831 241719842 E2F4 JASPAR yes 22248427
chr2 241719831 241719842 E2F6 JASPAR yes 22248428
chr2 241719831 241719845 E2F7 JASPAR yes 22248429
chr2 241719832 241719843 E2F1 JASPAR yes 22248430
chr2 241719841 241719862 ZNF263 JASPAR yes 22248431
chr2 241719846 241719852 SP1 TRANSFAC yes 22248432
chr2 241719846 241719856 SP1 JASPAR yes 22248433
chr2 241719863 241719884 IRF1 JASPAR yes 22248434
chr2 241719866 241719880 STAT1 JASPAR yes 22248435
chr2 241719867 241719881 IRF7 JASPAR yes 22248436
chr2 241719867 241719882 IRF9 JASPAR yes 22248437
chr2 241719875 241719887 E2F8 JASPAR yes 22248438
chr2 241719888 241719904 ZNF143 JASPAR yes 22248439
chr2 241719898 241719904 MZF1 JASPAR yes 22248440
chr2 241719921 241719931 TBR1 JASPAR yes 22248441
chr2 241719939 241719958 REST JASPAR yes 22248442
chr2 241719952 241719971 REST JASPAR yes 22248443
chr2 241719969 241719979 TFEB JASPAR yes 22248444
chr2 241719969 241719979 TFEC JASPAR yes 22248445
chr2 241719969 241719985 ZNF143 JASPAR yes 22248446
chr2 241719989 241719995 MZF1 JASPAR yes 22248447
chr2 241720013 241720017 NFE TRANSFAC yes 22248448
chr2 241720017 241720038 REST JASPAR yes 22248449
chr2 241720018 241720037 REST JASPAR yes 22248450
chr2 241720050 241720065 TFAP2A JASPAR yes 22248451
chr2 241720050 241720065 TFAP2C JASPAR yes 22248452
chr2 241720052 241720064 TFAP2A JASPAR yes 22248453
chr2 241720052 241720066 PLAG1 JASPAR yes 22248454
chr2 241720052 241720067 TFAP2A JASPAR yes 22248455
chr2 241720053 241720064 TFAP2A JASPAR yes 22248456
chr2 241720053 241720064 TFAP2B JASPAR yes 22248457
chr2 241720053 241720067 PLAG1 JASPAR yes 22248458
chr2 241720101 241720105 YY1 TRANSFAC yes 22248459
chr2 241720107 241720114 SPIB JASPAR yes 22248460
chr2 241720114 241720118 H4TF2 TRANSFAC yes 22248461
chr2 241720127 241720138 ELK4 JASPAR yes 22248462
chr2 241720127 241720140 ELF3 JASPAR yes 22248463
chr2 241720128 241720139 ELF5 JASPAR yes 22248464
chr2 241720128 241720140 EHF JASPAR yes 22248465
chr2 241720128 241720140 ELF1 JASPAR yes 22248466
chr2 241720128 241720140 ELF4 JASPAR yes 22248467
chr2 241720128 241720141 ELF1 JASPAR yes 22248468
chr2 241720130 241720136 ETS1 JASPAR yes 22248469
chr2 241720130 241720136 SPI1 JASPAR yes 22248470
chr2 241720130 241720140 ELK1 JASPAR yes 22248471
SNP sites on vista35558[chr2:241719463-241720148]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241719497 rs180705819 G A no 6502023
chr2 241719508 rs546726222 C T no 6502024
chr2 241719538 rs60806127 T C no 6502025
chr2 241719595 rs75882082 C G
STAT1
6502026
chr2 241719610 rs59733750 A G
PLAG1
6502027
chr2 241719675 rs77595074 C T no 6502028
chr2 241719676 rs572510094 G A,C,T no 6502029
chr2 241719678 rs369428701 C T no 6502030
chr2 241719755 rs80255003 C T no 6502031
chr2 241719876 rs544814629 T C
E2F8 IRF1 IRF7 IRF9 STAT1
6502032
chr2 241719878 rs560045014 T C
E2F8 IRF1 IRF7 IRF9 STAT1
6502033
chr2 241719880 rs527429269 T A
E2F8 IRF1 IRF7 IRF9 STAT1
6502034
chr2 241719919 rs146207117 C T no 6502035
chr2 241719939 rs539769782 C G
REST
6502036
chr2 241719985 rs28487574 G A
ZNF143
6502037
chr2 241720057 rs115893625 C A
PLAG1 TFAP2A TFAP2B TFAP2C
6502038
chr2 241720083 rs569742652 C T no 6502039
chr2 241720086 rs28572691 A C no 6502040
chr2 241720088 rs57816194 C G no 6502041
chr2 241720122 rs113092496 A G no 6502042
chr2 241720135 rs553975574 C A,T
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK4 ETS1 SPI1
6502043
Genes possibly regulated by vista35558[chr2:241719463-241720148]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241615835 241622323 - AQP12B ENSG00000185176.8 241622323 1.0 0.0 3328 2860
chr2 241624478 241624705 - AC011298.1 ENSG00000268822.1 241624705 0.98 0.0 3329 5242
chr2 241631262 241637900 + AQP12A ENSG00000184945.9 241631262 1.0 0.0 3330 11799
chr2 241653181 241759725 - KIF1A ENSG00000130294.10 241759725 0.95 0.96 3331 60423
chr2 241807896 241819919 + AGXT ENSG00000172482.4 241807896 1.0 1.0 3332 12252
Expression level of Genes
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miRNAs possibly regulated by vista35558[chr2:241719463-241720148]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results