EnhancerDB
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  3. vista35560[chr2:241771658-241772038]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35560[chr2:241771658-241772038]
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Tissue distribution of vista35560
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Transcription factor that possibly regulate vista35560[chr2:241771658-241772038]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241771741 241772145 MXI1 UCSC Txn Factor no Conserved 108436064
chr2 241771900 241772005 SREBP1 UCSC Txn Factor no Conserved 108436065
chr2 241771649 241771664 HSF1 JASPAR yes 22248481
chr2 241771649 241771664 HSF1 JASPAR yes 82292712
chr2 241771687 241771692 SP1 TRANSFAC yes 22248482
chr2 241771687 241771692 SP1 TRANSFAC yes 82292713
chr2 241771694 241771705 E2F4 JASPAR yes 22248483
chr2 241771694 241771705 E2F4 JASPAR yes 82292714
chr2 241771696 241771706 SP1 JASPAR yes 22248484
chr2 241771696 241771706 SP1 JASPAR yes 82292715
chr2 241771697 241771703 SP1 TRANSFAC yes 22248485
chr2 241771697 241771703 SP1 TRANSFAC yes 82292716
chr2 241771697 241771707 SP1 JASPAR yes 22248486
chr2 241771697 241771707 SP1 JASPAR yes 82292717
chr2 241771698 241771705 SP1 TRANSFAC yes 22248487
chr2 241771698 241771705 SP1 TRANSFAC yes 82292718
chr2 241771699 241771704 SP1 TRANSFAC yes 22248488
chr2 241771699 241771704 SP1 TRANSFAC yes 82292719
chr2 241771699 241771705 SP1 TRANSFAC yes 22248489
chr2 241771699 241771705 SP1 TRANSFAC yes 82292720
chr2 241771702 241771712 SP1 JASPAR yes 22248490
chr2 241771702 241771712 SP1 JASPAR yes 82292721
chr2 241771705 241771711 NFE2 TRANSFAC yes 22248491
chr2 241771705 241771711 NFE2 TRANSFAC yes 82292722
chr2 241771710 241771724 PLAG1 JASPAR yes 22248492
chr2 241771710 241771724 PLAG1 JASPAR yes 82292723
chr2 241771720 241771726 SP1 TRANSFAC yes 22248493
chr2 241771720 241771726 SP1 TRANSFAC yes 82292724
chr2 241771735 241771744 SP1 TRANSFAC yes 22248494
chr2 241771735 241771744 SP1 TRANSFAC yes 82292725
chr2 241771736 241771742 SP1 TRANSFAC yes 22248495
chr2 241771736 241771742 SP1 TRANSFAC yes 82292726
chr2 241771736 241771746 SP1 JASPAR yes 22248496
chr2 241771736 241771746 SP1 JASPAR yes 82292727
chr2 241771737 241771744 SP1 TRANSFAC yes 22248497
chr2 241771737 241771744 SP1 TRANSFAC yes 82292728
chr2 241771738 241771743 SP1 TRANSFAC yes 22248498
chr2 241771738 241771743 SP1 TRANSFAC yes 82292729
chr2 241771738 241771744 SP1 TRANSFAC yes 22248499
chr2 241771738 241771744 SP1 TRANSFAC yes 82292730
chr2 241771743 241771757 PLAG1 JASPAR yes 22248500
chr2 241771743 241771757 PLAG1 JASPAR yes 82292731
chr2 241771753 241771759 SP1 TRANSFAC yes 22248501
chr2 241771753 241771759 SP1 TRANSFAC yes 82292732
chr2 241771776 241771790 PLAG1 JASPAR yes 22248502
chr2 241771776 241771790 PLAG1 JASPAR yes 82292733
chr2 241771786 241771792 SP1 TRANSFAC yes 22248503
chr2 241771786 241771792 SP1 TRANSFAC yes 82292734
chr2 241771801 241771810 SP1 TRANSFAC yes 22248504
chr2 241771801 241771810 SP1 TRANSFAC yes 82292735
chr2 241771802 241771808 SP1 TRANSFAC yes 22248505
chr2 241771802 241771808 SP1 TRANSFAC yes 82292736
chr2 241771802 241771812 SP1 JASPAR yes 22248506
chr2 241771802 241771812 SP1 JASPAR yes 82292737
chr2 241771803 241771810 SP1 TRANSFAC yes 22248507
chr2 241771803 241771810 SP1 TRANSFAC yes 82292738
chr2 241771804 241771809 SP1 TRANSFAC yes 22248508
chr2 241771804 241771809 SP1 TRANSFAC yes 82292739
chr2 241771804 241771810 SP1 TRANSFAC yes 22248509
chr2 241771804 241771810 SP1 TRANSFAC yes 82292740
chr2 241771809 241771823 PLAG1 JASPAR yes 22248510
chr2 241771809 241771823 PLAG1 JASPAR yes 82292741
chr2 241771819 241771825 SP1 TRANSFAC yes 22248511
chr2 241771819 241771825 SP1 TRANSFAC yes 82292742
chr2 241771835 241771841 SP1 TRANSFAC yes 22248512
chr2 241771835 241771841 SP1 TRANSFAC yes 82292743
chr2 241771851 241771857 SP1 TRANSFAC yes 22248513
chr2 241771851 241771857 SP1 TRANSFAC yes 82292744
chr2 241771874 241771888 PLAG1 JASPAR yes 22248514
chr2 241771874 241771888 PLAG1 JASPAR yes 82292745
chr2 241771883 241771892 SP1 TRANSFAC yes 22248515
chr2 241771883 241771892 SP1 TRANSFAC yes 82292746
chr2 241771922 241771941 RFX2 JASPAR yes 22248516
chr2 241771922 241771941 RFX2 JASPAR yes 82292747
chr2 241771924 241771939 RFX5 JASPAR yes 22248517
chr2 241771924 241771939 RFX5 JASPAR yes 82292748
chr2 241771926 241771940 CREB3L1 JASPAR yes 22248518
chr2 241771926 241771940 CREB3L1 JASPAR yes 82292749
chr2 241771926 241771942 RFX2 JASPAR yes 22248519
chr2 241771926 241771942 RFX3 JASPAR yes 22248520
chr2 241771926 241771942 RFX4 JASPAR yes 22248521
chr2 241771926 241771942 RFX5 JASPAR yes 22248522
chr2 241771926 241771942 RFX2 JASPAR yes 82292750
chr2 241771926 241771942 RFX3 JASPAR yes 82292751
chr2 241771926 241771942 RFX4 JASPAR yes 82292752
chr2 241771926 241771942 RFX5 JASPAR yes 82292753
chr2 241771927 241771946 RFX2 JASPAR yes 22248523
chr2 241771927 241771946 RFX2 JASPAR yes 82292754
chr2 241771979 241771991 NHLH1 JASPAR yes 22248524
chr2 241771979 241771991 NHLH1 JASPAR yes 82292755
chr2 241771987 241772006 RFX2 JASPAR yes 22248525
chr2 241771987 241772006 RFX2 JASPAR yes 82292756
chr2 241771991 241772007 RFX2 JASPAR yes 22248526
chr2 241771991 241772007 RFX3 JASPAR yes 22248527
chr2 241771991 241772007 RFX4 JASPAR yes 22248528
chr2 241771991 241772007 RFX5 JASPAR yes 22248529
chr2 241771991 241772007 RFX2 JASPAR yes 82292757
chr2 241771991 241772007 RFX3 JASPAR yes 82292758
chr2 241771991 241772007 RFX4 JASPAR yes 82292759
chr2 241771991 241772007 RFX5 JASPAR yes 82292760
chr2 241771992 241772011 RFX2 JASPAR yes 22248530
chr2 241771992 241772011 RFX2 JASPAR yes 82292761
chr2 241772006 241772011 SP1 TRANSFAC yes 22248531
chr2 241772006 241772011 SP1 TRANSFAC yes 82292762
chr2 241772010 241772015 SP1 TRANSFAC yes 22248532
chr2 241772010 241772015 SP1 TRANSFAC yes 82292763
chr2 241772014 241772018 H4TF2 TRANSFAC yes 22248533
chr2 241772014 241772018 H4TF2 TRANSFAC yes 82292764
chr2 241772021 241772038 ESR1 JASPAR yes 22248534
chr2 241772021 241772038 ESR1 JASPAR yes 82292765
chr2 241772021 241772039 ESR2 JASPAR yes 22248535
chr2 241772021 241772039 ESR2 JASPAR yes 82292766
SNP sites on vista35560[chr2:241771658-241772038]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241771681 rs140327889 G C no 6502227
chr2 241771729 rs539708957 G A no 6502228
chr2 241771773 rs534279160 C A
MXI1
6502229
chr2 241771786 rs573306876 G A
MXI1 PLAG1 SP1
6502230
chr2 241771976 rs563281674 A G
MXI1 SREBP1
6502231
Genes possibly regulated by vista35560[chr2:241771658-241772038]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241653181 241759725 - KIF1A ENSG00000130294.10 241759725 0.95 0.96 3331 88067
chr2 241807896 241819919 + AGXT ENSG00000172482.4 241807896 1.0 1.0 3332 64142
chr2 241825465 241836306 - C2orf54 ENSG00000172478.13 241836306 0.98 0.98 3333 35732
chr2 241858202 241932728 + AC104809.3 ENSG00000226321.3 241858202 0.97 1.0 3334 13836
Expression level of Genes
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miRNAs possibly regulated by vista35560[chr2:241771658-241772038]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results