EnhancerDB
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  3. vista35561[chr2:241796889-241797214]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35561[chr2:241796889-241797214]
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Tissue distribution of vista35561
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Transcription factor that possibly regulate vista35561[chr2:241796889-241797214]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241796693 241797312 POLR2A UCSC Txn Factor no Conserved 108436066
chr2 241796835 241797072 MAX UCSC Txn Factor no Conserved 108436067
chr2 241796837 241797051 USF1 UCSC Txn Factor no Conserved 108436068
chr2 241796843 241797079 HNF4A UCSC Txn Factor no Conserved 108436069
chr2 241796869 241797025 MXI1 UCSC Txn Factor no Conserved 108436070
chr2 241796909 241797036 USF2 UCSC Txn Factor no Conserved 108436071
chr2 241796963 241797169 CEBPB UCSC Txn Factor no Conserved 108436072
chr2 241796888 241796905 RARA JASPAR yes 22248536
chr2 241796888 241796905 RARA JASPAR yes 82294529
chr2 241796900 241796904 LFA1 TRANSFAC yes 22248537
chr2 241796900 241796904 LFA1 TRANSFAC yes 82294530
chr2 241796935 241796949 CREB3L1 JASPAR yes 22248538
chr2 241796935 241796949 CREB3L1 JASPAR yes 82294531
chr2 241796936 241796946 MAX JASPAR yes 22248539
chr2 241796936 241796946 MAX JASPAR yes 82294532
chr2 241796936 241796947 USF1 JASPAR yes 22248540
chr2 241796936 241796947 USF2 JASPAR yes 22248541
chr2 241796936 241796947 USF1 JASPAR yes 82294533
chr2 241796936 241796947 USF2 JASPAR yes 82294534
chr2 241796936 241796948 HES5 JASPAR yes 22248542
chr2 241796936 241796948 HES5 JASPAR yes 82294535
chr2 241796937 241796947 HEY1 JASPAR yes 22248543
chr2 241796937 241796947 HEY2 JASPAR yes 22248544
chr2 241796937 241796947 MAX JASPAR yes 22248545
chr2 241796937 241796947 MNT JASPAR yes 22248546
chr2 241796937 241796947 TFE3 JASPAR yes 22248547
chr2 241796937 241796947 TFEB JASPAR yes 22248548
chr2 241796937 241796947 HEY1 JASPAR yes 82294536
chr2 241796937 241796947 HEY2 JASPAR yes 82294537
chr2 241796937 241796947 MAX JASPAR yes 82294538
chr2 241796937 241796947 MNT JASPAR yes 82294539
chr2 241796937 241796947 TFE3 JASPAR yes 82294540
chr2 241796937 241796947 TFEB JASPAR yes 82294541
chr2 241796937 241796948 USF1 JASPAR yes 22248549
chr2 241796937 241796948 USF2 JASPAR yes 22248550
chr2 241796937 241796948 USF1 JASPAR yes 82294542
chr2 241796937 241796948 USF2 JASPAR yes 82294543
chr2 241796938 241796945 USF1 JASPAR yes 22248551
chr2 241796938 241796945 USF1 JASPAR yes 82294544
chr2 241796938 241796948 MAX JASPAR yes 22248552
chr2 241796938 241796948 MAX JASPAR yes 82294545
chr2 241796939 241796944 MYC TRANSFAC yes 22248553
chr2 241796939 241796944 USF1 TRANSFAC yes 22248554
chr2 241796939 241796944 USF2 TRANSFAC yes 22248555
chr2 241796939 241796944 MYC TRANSFAC yes 82294546
chr2 241796939 241796944 USF1 TRANSFAC yes 82294547
chr2 241796939 241796944 USF2 TRANSFAC yes 82294548
chr2 241796939 241796946 USF1 JASPAR yes 22248556
chr2 241796939 241796946 USF1 JASPAR yes 82294549
chr2 241796945 241796956 USF1 JASPAR yes 22248557
chr2 241796945 241796956 USF2 JASPAR yes 22248558
chr2 241796945 241796956 USF1 JASPAR yes 82294550
chr2 241796945 241796956 USF2 JASPAR yes 82294551
chr2 241796946 241796964 ESR1 JASPAR yes 22248559
chr2 241796946 241796964 ESR1 JASPAR yes 82294552
chr2 241796951 241796966 HNF4G JASPAR yes 22248560
chr2 241796951 241796966 HNF4G JASPAR yes 82294553
chr2 241796958 241796963 GATA2 JASPAR yes 22248561
chr2 241796958 241796963 GATA2 JASPAR yes 82294554
chr2 241796972 241796990 ESR1 JASPAR yes 22248562
chr2 241796972 241796990 ESR1 JASPAR yes 82294555
chr2 241796974 241796989 HNF4G JASPAR yes 22248563
chr2 241796974 241796989 NR2C2 JASPAR yes 22248564
chr2 241796974 241796989 HNF4G JASPAR yes 82294556
chr2 241796974 241796989 NR2C2 JASPAR yes 82294557
chr2 241796975 241796989 RXRG JASPAR yes 22248565
chr2 241796975 241796989 RXRG JASPAR yes 82294558
chr2 241796975 241796990 HNF4A JASPAR yes 22248566
chr2 241796975 241796990 HNF4A JASPAR yes 82294559
chr2 241796977 241796989 TGIF1 JASPAR yes 22248567
chr2 241796977 241796989 TGIF1 JASPAR yes 82294560
chr2 241796979 241796985 SOX10 JASPAR yes 22248568
chr2 241796979 241796985 SOX10 JASPAR yes 82294561
chr2 241796979 241796989 RORA JASPAR yes 22248569
chr2 241796979 241796989 RORA JASPAR yes 82294562
chr2 241796980 241796991 ESRRA JASPAR yes 22248570
chr2 241796980 241796991 ESRRA JASPAR yes 82294563
chr2 241796980 241796993 NR2F1 JASPAR yes 22248571
chr2 241796980 241796993 NR2F1 JASPAR yes 82294564
chr2 241796982 241796990 NR4A2 JASPAR yes 22248572
chr2 241796982 241796990 NR4A2 JASPAR yes 82294565
chr2 241796984 241796988 ESR1 TRANSFAC yes 22248573
chr2 241796984 241796988 ESR1 TRANSFAC yes 82294566
chr2 241796987 241796992 MYC TRANSFAC yes 22248574
chr2 241796987 241796992 MYC TRANSFAC yes 82294567
chr2 241797033 241797037 H1TF2 TRANSFAC yes 22248575
chr2 241797033 241797037 NFE TRANSFAC yes 22248576
chr2 241797033 241797037 SRF TRANSFAC yes 22248577
chr2 241797033 241797037 H1TF2 TRANSFAC yes 82294568
chr2 241797033 241797037 NFE TRANSFAC yes 82294569
chr2 241797033 241797037 SRF TRANSFAC yes 82294570
chr2 241797045 241797060 TFAP2C JASPAR yes 22248578
chr2 241797045 241797060 TFAP2C JASPAR yes 82294571
chr2 241797049 241797060 FOXA1 JASPAR yes 22248579
chr2 241797049 241797060 FOXA1 JASPAR yes 82294572
chr2 241797053 241797063 REL JASPAR yes 22248580
chr2 241797053 241797063 REL JASPAR yes 82294573
chr2 241797066 241797078 ZBTB7B JASPAR yes 22248581
chr2 241797066 241797078 ZBTB7C JASPAR yes 22248582
chr2 241797066 241797078 ZBTB7B JASPAR yes 82294574
chr2 241797066 241797078 ZBTB7C JASPAR yes 82294575
chr2 241797067 241797079 ZBTB7A JASPAR yes 22248583
chr2 241797067 241797079 ZBTB7A JASPAR yes 82294576
chr2 241797072 241797085 ATF4 JASPAR yes 22248584
chr2 241797072 241797085 ATF4 JASPAR yes 82294577
chr2 241797074 241797087 SCRT2 JASPAR yes 22248585
chr2 241797074 241797087 SCRT2 JASPAR yes 82294578
chr2 241797078 241797088 MSC JASPAR yes 22248586
chr2 241797078 241797088 MSC JASPAR yes 82294579
chr2 241797087 241797106 RFX2 JASPAR yes 22248587
chr2 241797087 241797106 RFX2 JASPAR yes 82294580
chr2 241797088 241797098 HMBOX1 JASPAR yes 22248588
chr2 241797088 241797098 HMBOX1 JASPAR yes 82294581
chr2 241797091 241797107 RFX2 JASPAR yes 22248589
chr2 241797091 241797107 RFX3 JASPAR yes 22248590
chr2 241797091 241797107 RFX4 JASPAR yes 22248591
chr2 241797091 241797107 RFX5 JASPAR yes 22248592
chr2 241797091 241797107 RFX2 JASPAR yes 82294582
chr2 241797091 241797107 RFX3 JASPAR yes 82294583
chr2 241797091 241797107 RFX4 JASPAR yes 82294584
chr2 241797091 241797107 RFX5 JASPAR yes 82294585
chr2 241797101 241797107 SOX10 JASPAR yes 22248593
chr2 241797101 241797107 SOX10 JASPAR yes 82294586
chr2 241797108 241797119 FOXA1 JASPAR yes 22248594
chr2 241797108 241797119 FOXA1 JASPAR yes 82294587
chr2 241797108 241797123 FOXA1 JASPAR yes 22248595
chr2 241797108 241797123 FOXA1 JASPAR yes 82294588
chr2 241797109 241797121 FOXC2 JASPAR yes 22248596
chr2 241797109 241797121 FOXC2 JASPAR yes 82294589
chr2 241797136 241797142 SOX10 JASPAR yes 22248597
chr2 241797136 241797142 SOX10 JASPAR yes 82294590
chr2 241797137 241797148 FOXA1 JASPAR yes 22248598
chr2 241797137 241797148 FOXA1 JASPAR yes 82294591
chr2 241797145 241797153 TBX5 JASPAR yes 22248599
chr2 241797145 241797153 TBX5 JASPAR yes 82294592
chr2 241797155 241797165 RELA JASPAR yes 22248600
chr2 241797155 241797165 RELA JASPAR yes 82294593
chr2 241797176 241797186 SP1 JASPAR yes 22248601
chr2 241797176 241797186 SP1 JASPAR yes 82294594
SNP sites on vista35561[chr2:241796889-241797214]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241796904 rs35918150 C T
HNF4A LFA1 MAX MXI1 POLR2A RARA USF1
6502498
chr2 241796905 rs4401206 A G
HNF4A MAX MXI1 POLR2A RARA USF1
6502499
chr2 241797083 rs7593124 G A
ATF4 CEBPB MSC POLR2A SCRT2
6502500
chr2 241797197 rs116917879 C T
POLR2A
6502501
Genes possibly regulated by vista35561[chr2:241796889-241797214]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241653181 241759725 - KIF1A ENSG00000130294.10 241759725 0.95 0.96 3331 62836
chr2 241807896 241819919 + AGXT ENSG00000172482.4 241807896 1.0 1.0 3332 89318
chr2 241825465 241836306 - C2orf54 ENSG00000172478.13 241836306 0.98 0.98 3333 60908
chr2 241858202 241932728 + AC104809.3 ENSG00000226321.3 241858202 0.97 1.0 3334 39012
Expression level of Genes
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miRNAs possibly regulated by vista35561[chr2:241796889-241797214]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results