EnhancerDB
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  3. vista35564[chr2:241860652-241861096]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35564[chr2:241860652-241861096]
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Tissue distribution of vista35564
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Transcription factor that possibly regulate vista35564[chr2:241860652-241861096]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 241860744 241861047 STAT3 UCSC Txn Factor no Conserved 108436074
chr2 241860644 241860663 REST JASPAR yes 22248670
chr2 241860644 241860663 REST JASPAR yes 82296078
chr2 241860655 241860660 SP1 TRANSFAC yes 22248671
chr2 241860655 241860660 SP1 TRANSFAC yes 82296079
chr2 241860671 241860677 MZF1 JASPAR yes 22248672
chr2 241860671 241860677 MZF1 JASPAR yes 82296080
chr2 241860684 241860688 NFE TRANSFAC yes 22248673
chr2 241860684 241860688 NFE TRANSFAC yes 82296081
chr2 241860689 241860694 SP1 TRANSFAC yes 22248674
chr2 241860689 241860694 SP1 TRANSFAC yes 82296082
chr2 241860697 241860707 ZNF740 JASPAR yes 22248675
chr2 241860697 241860707 ZNF740 JASPAR yes 82296083
chr2 241860724 241860733 SOX9 JASPAR yes 22248676
chr2 241860724 241860733 SOX9 JASPAR yes 82296084
chr2 241860739 241860753 PLAG1 JASPAR yes 22248677
chr2 241860739 241860753 PLAG1 JASPAR yes 82296085
chr2 241860746 241860761 TFAP2A JASPAR yes 22248678
chr2 241860746 241860761 TFAP2A JASPAR yes 82296086
chr2 241860747 241860760 TFAP2B JASPAR yes 22248679
chr2 241860747 241860760 TFAP2B JASPAR yes 82296087
chr2 241860748 241860761 TFAP2A JASPAR yes 22248680
chr2 241860748 241860761 TFAP2B JASPAR yes 22248681
chr2 241860748 241860761 TFAP2C JASPAR yes 22248682
chr2 241860748 241860761 TFAP2A JASPAR yes 82296088
chr2 241860748 241860761 TFAP2B JASPAR yes 82296089
chr2 241860748 241860761 TFAP2C JASPAR yes 82296090
chr2 241860748 241860763 TFAP2A JASPAR yes 22248683
chr2 241860748 241860763 TFAP2C JASPAR yes 22248684
chr2 241860748 241860763 TFAP2A JASPAR yes 82296091
chr2 241860748 241860763 TFAP2C JASPAR yes 82296092
chr2 241860749 241860761 TFAP2A JASPAR yes 22248685
chr2 241860749 241860761 TFAP2B JASPAR yes 22248686
chr2 241860749 241860761 TFAP2C JASPAR yes 22248687
chr2 241860749 241860761 TFAP2A JASPAR yes 82296093
chr2 241860749 241860761 TFAP2B JASPAR yes 82296094
chr2 241860749 241860761 TFAP2C JASPAR yes 82296095
chr2 241860753 241860762 THAP1 JASPAR yes 22248688
chr2 241860753 241860762 THAP1 JASPAR yes 82296096
chr2 241860756 241860760 LFA1 TRANSFAC yes 22248689
chr2 241860756 241860760 LFA1 TRANSFAC yes 82296097
chr2 241860769 241860773 H4TF2 TRANSFAC yes 22248690
chr2 241860769 241860773 H4TF2 TRANSFAC yes 82296098
chr2 241860775 241860784 ZEB1 JASPAR yes 22248691
chr2 241860775 241860784 ZEB1 JASPAR yes 82296099
chr2 241860778 241860783 USF2 TRANSFAC yes 22248692
chr2 241860778 241860783 USF2 TRANSFAC yes 82296100
chr2 241860787 241860792 SP1 TRANSFAC yes 22248693
chr2 241860787 241860792 SP1 TRANSFAC yes 82296101
chr2 241860807 241860820 SMAD2 JASPAR yes 22248694
chr2 241860807 241860820 SMAD2 JASPAR yes 82296102
chr2 241860824 241860834 GABPA JASPAR yes 22248695
chr2 241860824 241860834 GABPA JASPAR yes 82296103
chr2 241860824 241860839 STAT1 JASPAR yes 22248696
chr2 241860824 241860839 STAT1 JASPAR yes 82296104
chr2 241860839 241860852 ZBTB18 JASPAR yes 22248697
chr2 241860839 241860852 ZBTB18 JASPAR yes 82296105
chr2 241860841 241860851 MSC JASPAR yes 22248698
chr2 241860841 241860851 TFAP4 JASPAR yes 22248699
chr2 241860841 241860851 MSC JASPAR yes 82296106
chr2 241860841 241860851 TFAP4 JASPAR yes 82296107
chr2 241860849 241860854 TFAP2A TRANSFAC yes 22248700
chr2 241860849 241860854 TFAP2A TRANSFAC yes 82296108
chr2 241860849 241860855 MZF1 JASPAR yes 22248701
chr2 241860849 241860855 MZF1 JASPAR yes 82296109
chr2 241860849 241860870 ZNF263 JASPAR yes 22248702
chr2 241860849 241860870 ZNF263 JASPAR yes 82296110
chr2 241860853 241860867 PLAG1 JASPAR yes 22248703
chr2 241860853 241860867 PLAG1 JASPAR yes 82296111
chr2 241860855 241860867 TFAP2A JASPAR yes 22248704
chr2 241860855 241860867 TFAP2B JASPAR yes 22248705
chr2 241860855 241860867 TFAP2C JASPAR yes 22248706
chr2 241860855 241860867 TFAP2A JASPAR yes 82296112
chr2 241860855 241860867 TFAP2B JASPAR yes 82296113
chr2 241860855 241860867 TFAP2C JASPAR yes 82296114
chr2 241860872 241860883 STAT1 JASPAR yes 22248707
chr2 241860872 241860883 STAT3 JASPAR yes 22248708
chr2 241860872 241860883 STAT1 JASPAR yes 82296115
chr2 241860872 241860883 STAT3 JASPAR yes 82296116
chr2 241860885 241860890 SP1 TRANSFAC yes 22248709
chr2 241860885 241860890 SP1 TRANSFAC yes 82296117
chr2 241860887 241860892 TFAP2A TRANSFAC yes 22248710
chr2 241860887 241860892 TFAP2A TRANSFAC yes 82296118
chr2 241860887 241860893 MZF1 JASPAR yes 22248711
chr2 241860887 241860893 MZF1 JASPAR yes 82296119
chr2 241860897 241860911 TLX1 JASPAR yes 22248712
chr2 241860897 241860911 TLX1 JASPAR yes 82296120
chr2 241860898 241860912 TLX1 JASPAR yes 22248713
chr2 241860898 241860912 TLX1 JASPAR yes 82296121
chr2 241860920 241860935 RUNX2 JASPAR yes 22248714
chr2 241860920 241860935 RUNX2 JASPAR yes 82296122
chr2 241860928 241860934 HiNF-A TRANSFAC yes 22248715
chr2 241860928 241860934 HiNF-A TRANSFAC yes 82296123
chr2 241860956 241860967 FOSL2 JASPAR yes 22248716
chr2 241860956 241860967 JUNB JASPAR yes 22248717
chr2 241860956 241860967 FOSL2 JASPAR yes 82296124
chr2 241860956 241860967 JUNB JASPAR yes 82296125
chr2 241860957 241860968 FOS JASPAR yes 22248718
chr2 241860957 241860968 FOSL1 JASPAR yes 22248719
chr2 241860957 241860968 JUND JASPAR yes 22248720
chr2 241860957 241860968 FOS JASPAR yes 82296126
chr2 241860957 241860968 FOSL1 JASPAR yes 82296127
chr2 241860957 241860968 JUND JASPAR yes 82296128
chr2 241860958 241860972 JUN JASPAR yes 22248721
chr2 241860958 241860972 JUN JASPAR yes 82296129
chr2 241860959 241860966 JUN TRANSFAC yes 22248722
chr2 241860959 241860966 JUN TRANSFAC yes 82296130
chr2 241860959 241860970 BATF JASPAR yes 22248723
chr2 241860959 241860970 BATF JASPAR yes 82296131
chr2 241861005 241861010 SP1 TRANSFAC yes 22248724
chr2 241861005 241861010 SP1 TRANSFAC yes 82296132
chr2 241861026 241861041 RFX5 JASPAR yes 22248725
chr2 241861026 241861041 RFX5 JASPAR yes 82296133
chr2 241861036 241861046 SP1 JASPAR yes 22248726
chr2 241861036 241861046 SP1 JASPAR yes 82296134
chr2 241861037 241861047 SP1 JASPAR yes 22248727
chr2 241861037 241861047 SP1 JASPAR yes 82296135
chr2 241861048 241861051 MYB TRANSFAC yes 22248728
chr2 241861048 241861051 MYB TRANSFAC yes 82296136
chr2 241861071 241861076 SP1 TRANSFAC yes 22248729
chr2 241861071 241861076 SP1 TRANSFAC yes 82296137
chr2 241861079 241861097 ESR1 JASPAR yes 22248730
chr2 241861079 241861097 ESR2 JASPAR yes 22248731
chr2 241861079 241861097 ESR1 JASPAR yes 82296138
chr2 241861079 241861097 ESR2 JASPAR yes 82296139
chr2 241861081 241861101 ESR1 JASPAR yes 22248732
chr2 241861081 241861101 ESR1 JASPAR yes 82296140
SNP sites on vista35564[chr2:241860652-241861096]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 241860658 rs74000118 G A
REST SP1
6502734
chr2 241860666 rs576504471 C G no 6502735
chr2 241860691 rs75438615 C T
SP1
6502736
chr2 241860863 rs79480475 G C,T
PLAG1 STAT3 TFAP2A TFAP2B TFAP2C ZNF263
6502737
chr2 241860911 rs10207380 A G
STAT3 TLX1
6502738
chr2 241860929 rs74558964 A G
HiNF-A RUNX2 STAT3
6502739
chr2 241861006 rs74000119 G A
SP1 STAT3
6502740
chr2 241861045 rs571630659 G A
SP1 STAT3
6502741
Genes possibly regulated by vista35564[chr2:241860652-241861096]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 241807896 241819919 + AGXT ENSG00000172482.4 241807896 1.0 1.0 3332 47244
chr2 241825465 241836306 - C2orf54 ENSG00000172478.13 241836306 0.98 0.98 3333 75654
chr2 241858202 241932728 + AC104809.3 ENSG00000226321.3 241858202 0.97 1.0 3334 97550
chr2 241938255 242034983 + SNED1 ENSG00000162804.9 241938255 0.83 1.0 3335 22841
Expression level of Genes
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miRNAs possibly regulated by vista35564[chr2:241860652-241861096]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results