EnhancerDB
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  3. vista35573[chr2:242171569-242171970]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35573[chr2:242171569-242171970]
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Tissue distribution of vista35573
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Transcription factor that possibly regulate vista35573[chr2:242171569-242171970]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 242171583 242171593 ERF JASPAR yes 22249148
chr2 242171585 242171591 ETS1 JASPAR yes 22249149
chr2 242171585 242171591 SPI1 JASPAR yes 22249150
chr2 242171620 242171626 HiNF-A TRANSFAC yes 22249151
chr2 242171670 242171680 GBX2 JASPAR yes 22249152
chr2 242171670 242171680 HOXB3 JASPAR yes 22249153
chr2 242171670 242171680 MNX1 JASPAR yes 22249154
chr2 242171671 242171679 BARX1 JASPAR yes 22249155
chr2 242171671 242171679 EN1 JASPAR yes 22249156
chr2 242171671 242171679 ISL2 JASPAR yes 22249157
chr2 242171671 242171679 MSX1 JASPAR yes 22249158
chr2 242171671 242171679 MSX2 JASPAR yes 22249159
chr2 242171671 242171679 PDX1 JASPAR yes 22249160
chr2 242171671 242171680 VENTX JASPAR yes 22249161
chr2 242171674 242171685 CEBPA JASPAR yes 22249162
chr2 242171677 242171685 FOXO3 JASPAR yes 22249163
chr2 242171678 242171687 SRY JASPAR yes 22249164
chr2 242171680 242171689 SOX9 JASPAR yes 22249165
chr2 242171680 242171696 SOX4 JASPAR yes 22249166
chr2 242171681 242171696 SOX21 JASPAR yes 22249167
chr2 242171681 242171697 SOX4 JASPAR yes 22249168
chr2 242171684 242171705 IRF1 JASPAR yes 22249169
chr2 242171686 242171701 PRDM1 JASPAR yes 22249170
chr2 242171686 242171701 STAT2 JASPAR yes 22249171
chr2 242171686 242171707 IRF1 JASPAR yes 22249172
chr2 242171689 242171704 FOXP1 JASPAR yes 22249173
chr2 242171690 242171705 FOXP1 JASPAR yes 22249174
chr2 242171691 242171706 FOXP1 JASPAR yes 22249175
chr2 242171692 242171707 FOXP1 JASPAR yes 22249176
chr2 242171693 242171708 FOXP1 JASPAR yes 22249177
chr2 242171694 242171709 FOXP1 JASPAR yes 22249178
chr2 242171695 242171710 FOXP1 JASPAR yes 22249179
chr2 242171716 242171735 PAX5 JASPAR yes 22249180
chr2 242171724 242171728 NFE TRANSFAC yes 22249181
chr2 242171746 242171756 SREBF2 JASPAR yes 22249182
chr2 242171756 242171766 SREBF1 JASPAR yes 22249183
chr2 242171772 242171780 SP1 TRANSFAC yes 22249184
chr2 242171772 242171782 SP1 JASPAR yes 22249185
chr2 242171828 242171837 SNAI2 JASPAR yes 22249186
chr2 242171828 242171838 ID4 JASPAR yes 22249187
chr2 242171828 242171838 TCF3 JASPAR yes 22249188
chr2 242171828 242171838 TCF4 JASPAR yes 22249189
chr2 242171839 242171851 GLI2 JASPAR yes 22249190
chr2 242171842 242171861 PAX5 JASPAR yes 22249191
chr2 242171853 242171866 POU2F2 JASPAR yes 22249192
chr2 242171853 242171867 POU1F1 JASPAR yes 22249193
chr2 242171854 242171866 POU3F1 JASPAR yes 22249194
chr2 242171854 242171866 POU3F2 JASPAR yes 22249195
chr2 242171854 242171867 POU3F3 JASPAR yes 22249196
chr2 242171855 242171867 POU2F1 JASPAR yes 22249197
chr2 242171859 242171874 MEF2A JASPAR yes 22249198
chr2 242171861 242171873 MEF2A JASPAR yes 22249199
chr2 242171861 242171873 MEF2B JASPAR yes 22249200
chr2 242171861 242171873 MEF2D JASPAR yes 22249201
chr2 242171862 242171872 MEF2A JASPAR yes 22249202
chr2 242171863 242171867 YY1 TRANSFAC yes 22249203
chr2 242171883 242171894 YY2 JASPAR yes 22249204
chr2 242171884 242171896 YY1 JASPAR yes 22249205
chr2 242171891 242171911 PPARG JASPAR yes 22249206
chr2 242171893 242171911 ESR1 JASPAR yes 22249207
chr2 242171893 242171911 ESR2 JASPAR yes 22249208
chr2 242171894 242171909 ESR2 JASPAR yes 22249209
chr2 242171894 242171914 ESR1 JASPAR yes 22249210
chr2 242171895 242171899 ESR1 TRANSFAC yes 22249211
chr2 242171901 242171912 ESRRB JASPAR yes 22249212
chr2 242171906 242171924 RARA JASPAR yes 22249213
chr2 242171913 242171926 NR2F1 JASPAR yes 22249214
chr2 242171915 242171930 TFAP2C JASPAR yes 22249215
chr2 242171917 242171925 CREB1 JASPAR yes 22249216
chr2 242171920 242171931 EBF1 JASPAR yes 22249217
chr2 242171924 242171937 NFKB1 JASPAR yes 22249218
chr2 242171924 242171937 NFKB2 JASPAR yes 22249219
chr2 242171929 242171935 ZNF354C JASPAR yes 22249220
chr2 242171934 242171948 PLAG1 JASPAR yes 22249221
SNP sites on vista35573[chr2:242171569-242171970]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 242171587 rs369173731 G A
ERF ETS1 SPI1
6503781
chr2 242171640 rs115369318 C T no 6503782
chr2 242171690 rs146304027 C CT
FOXP1 IRF1 PRDM1 SOX21 SOX4 STAT2
6503783
chr2 242171690 rs547329248 C CT
FOXP1 IRF1 PRDM1 SOX21 SOX4 STAT2
6503784
chr2 242171728 rs147998961 T A
NFE PAX5
6503785
chr2 242171776 rs550366757 C T
SP1
6503786
chr2 242171847 rs140789776 C T
GLI2 PAX5
6503787
Genes possibly regulated by vista35573[chr2:242171569-242171970]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 242045514 242089679 - PASK ENSG00000115687.9 242089679 0.92 1.0 3337 18110
chr2 242088991 242123067 + PPP1R7 ENSG00000115685.10 242088991 0.71 0.99 3338 17422
chr2 242127924 242164792 + ANO7 ENSG00000146205.9 242127924 0.91 0.99 3339 56355
chr2 242166679 242256476 - HDLBP ENSG00000115677.12 242256476 0.72 1.0 3340 15494
chr2 242167319 242168850 + AC104841.2 ENSG00000268485.1 242167319 0.86 1.0 3341 95750
chr2 242254515 242293442 + SEPT2 ENSG00000168385.13 242254515 0.71 0.99 3342 17455
Expression level of Genes
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miRNAs possibly regulated by vista35573[chr2:242171569-242171970]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results