EnhancerDB
  1. Home
  2. Enhancers
  3. vista3558[chr1:159851477-159851987]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3558[chr1:159851477-159851987]
Back to top
Tissue distribution of vista3558
Back to top
Transcription factor that possibly regulate vista3558[chr1:159851477-159851987]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 159851461 159852589 POLR2A UCSC Txn Factor no Conserved 107838801
chr1 159851461 159852589 POLR2A UCSC Txn Factor no Conserved 107838802
chr1 159851672 159852112 MYC UCSC Txn Factor no Conserved 107838816
chr1 159851694 159852094 FOS UCSC Txn Factor no Conserved 107838823
chr1 159851480 159851484 H1TF2 TRANSFAC yes 118382361
chr1 159851480 159851484 NFE TRANSFAC yes 118382362
chr1 159851480 159851484 SRF TRANSFAC yes 118382363
chr1 159851487 159851503 SOX4 JASPAR yes 118382364
chr1 159851489 159851500 ESRRB JASPAR yes 118382365
chr1 159851503 159851508 ETS2 TRANSFAC yes 118382366
chr1 159851503 159851511 EHF JASPAR yes 118382367
chr1 159851542 159851552 MSC JASPAR yes 118382368
chr1 159851556 159851566 SREBF1 JASPAR yes 118382369
chr1 159851556 159851566 SREBF2 JASPAR yes 118382370
chr1 159851597 159851601 LFA1 TRANSFAC yes 118382371
chr1 159851613 159851625 TAL1 JASPAR yes 118382372
chr1 159851614 159851627 ZBTB18 JASPAR yes 118382373
chr1 159851615 159851625 MSC JASPAR yes 118382374
chr1 159851615 159851625 MYF6 JASPAR yes 118382375
chr1 159851615 159851625 TFAP4 JASPAR yes 118382376
chr1 159851615 159851627 TAL1 JASPAR yes 118382377
chr1 159851621 159851638 RARA JASPAR yes 118382378
chr1 159851621 159851638 RXRA JASPAR yes 118382379
chr1 159851625 159851645 RREB1 JASPAR yes 118382380
chr1 159851628 159851632 H1TF2 TRANSFAC yes 118382381
chr1 159851628 159851632 NFE TRANSFAC yes 118382382
chr1 159851628 159851632 SRF TRANSFAC yes 118382383
chr1 159851638 159851642 H1TF2 TRANSFAC yes 118382384
chr1 159851638 159851642 NFE TRANSFAC yes 118382385
chr1 159851638 159851642 SRF TRANSFAC yes 118382386
chr1 159851648 159851660 PROX1 JASPAR yes 118382387
chr1 159851659 159851673 SPI1 JASPAR yes 118382388
chr1 159851665 159851680 HNF1A JASPAR yes 118382389
chr1 159851666 159851679 HNF1B JASPAR yes 118382390
chr1 159851666 159851680 ONECUT1 JASPAR yes 118382391
chr1 159851666 159851680 ONECUT2 JASPAR yes 118382392
chr1 159851666 159851680 ONECUT3 JASPAR yes 118382393
chr1 159851667 159851676 SOX9 JASPAR yes 118382394
chr1 159851667 159851677 CUX1 JASPAR yes 118382395
chr1 159851667 159851677 CUX2 JASPAR yes 118382396
chr1 159851667 159851679 HNF1B JASPAR yes 118382397
chr1 159851670 159851683 DUXA JASPAR yes 118382398
chr1 159851671 159851682 DUX4 JASPAR yes 118382399
chr1 159851675 159851678 MYB TRANSFAC yes 118382400
chr1 159851677 159851697 RREB1 JASPAR yes 118382401
chr1 159851678 159851688 SREBF1 JASPAR yes 118382402
chr1 159851678 159851688 SREBF2 JASPAR yes 118382403
chr1 159851680 159851700 RREB1 JASPAR yes 118382404
chr1 159851681 159851691 SP1 JASPAR yes 118382405
chr1 159851682 159851692 SP1 JASPAR yes 118382406
chr1 159851685 159851699 GLIS3 JASPAR yes 118382407
chr1 159851697 159851705 FOXO3 JASPAR yes 118382408
chr1 159851713 159851717 YY1 TRANSFAC yes 118382409
chr1 159851761 159851773 NHLH1 JASPAR yes 118382410
chr1 159851762 159851772 NHLH1 JASPAR yes 118382411
chr1 159851770 159851779 THAP1 JASPAR yes 118382412
chr1 159851774 159851785 FOSL1 JASPAR yes 118382413
chr1 159851776 159851787 BATF JASPAR yes 118382414
chr1 159851785 159851788 MYB TRANSFAC yes 118382415
chr1 159851794 159851797 MYB TRANSFAC yes 118382416
chr1 159851794 159851809 PRDM1 JASPAR yes 118382417
chr1 159851809 159851819 GABPA JASPAR yes 118382418
chr1 159851823 159851837 TLX1 JASPAR yes 118382419
chr1 159851824 159851838 TLX1 JASPAR yes 118382420
chr1 159851839 159851853 TLX1 JASPAR yes 118382421
chr1 159851840 159851854 TLX1 JASPAR yes 118382422
chr1 159851857 159851869 PROX1 JASPAR yes 118382423
chr1 159851866 159851871 ETS2 TRANSFAC yes 118382424
chr1 159851872 159851880 EHF JASPAR yes 118382425
chr1 159851919 159851923 H4TF2 TRANSFAC yes 118382426
chr1 159851928 159851942 JUN JASPAR yes 118382427
chr1 159851931 159851942 FOSL2 JASPAR yes 118382428
chr1 159851931 159851942 JUNB JASPAR yes 118382429
chr1 159851932 159851943 FOS JASPAR yes 118382430
chr1 159851932 159851943 FOSL1 JASPAR yes 118382431
chr1 159851932 159851943 JUND JASPAR yes 118382432
chr1 159851932 159851943 NFE2 JASPAR yes 118382433
chr1 159851933 159851942 JDP2 JASPAR yes 118382434
chr1 159851933 159851944 FOSL2 JASPAR yes 118382435
chr1 159851933 159851944 JUNB JASPAR yes 118382436
chr1 159851933 159851947 JUN JASPAR yes 118382437
chr1 159851948 159851963 PRDM1 JASPAR yes 118382438
chr1 159851954 159851975 ZNF263 JASPAR yes 118382439
chr1 159851970 159851974 YY1 TRANSFAC yes 118382440
chr1 159851975 159851981 TCF4 TRANSFAC yes 118382441
SNP sites on vista3558[chr1:159851477-159851987]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 159851593 rs141476465 C G
POLR2A
662361
chr1 159851628 rs146978312 C T
H1TF2 NFE POLR2A RARA RREB1 RXRA SRF
662362
chr1 159851807 rs192446046 T C
FOS MYC POLR2A PRDM1
662363
chr1 159851809 rs12080085 T C
FOS GABPA MYC POLR2A PRDM1
662364
chr1 159851838 rs376359704 G C
FOS MYC POLR2A TLX1
662365
chr1 159851880 rs183915775 G A,T
EHF FOS MYC POLR2A
662366
Genes possibly regulated by vista3558[chr1:159851477-159851987]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 159770301 159786041 + FCRL6 ENSG00000181036.9 159770301 0.96 0.0 1430 18824
chr1 159796540 159807039 + SLAMF8 ENSG00000158714.6 159796540 0.84 1.0 1431 45063
chr1 159804264 159825137 - C1orf204 ENSG00000188004.5 159825137 0.77 1.0 1432 73660
chr1 159824106 159832447 - VSIG8 ENSG00000243284.1 159832447 0.95 1.0 1433 80970
chr1 159827690 159842843 - RP11-190A12.7 ENSG00000256029.1 159842843 0.98 1.0 1434 91366
chr1 159842154 159869953 - CCDC19 ENSG00000213085.5 159869953 0.94 1.0 1435 82034
chr1 159879884 159880159 - AL590560.1 ENSG00000269620.1 159880159 0.94 0.98 1436 71828
chr1 159887897 159895522 - TAGLN2 ENSG00000158710.10 159895522 0.78 0.99 1437 56465
chr1 159896829 159915386 - IGSF9 ENSG00000085552.12 159915386 0.91 1.0 1438 36601
chr1 159921282 159924044 - SLAMF9 ENSG00000162723.5 159924044 0.94 0.99 1439 27943
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3558[chr1:159851477-159851987]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results