EnhancerDB
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  3. vista3562[chr1:159880076-159880706]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3562[chr1:159880076-159880706]
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Tissue distribution of vista3562
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Transcription factor that possibly regulate vista3562[chr1:159880076-159880706]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 159879924 159880836 POLR2A UCSC Txn Factor no Conserved 107838944
chr1 159879996 159880551 GATA2 UCSC Txn Factor no Conserved 107838962
chr1 159880167 159880483 EBF1 UCSC Txn Factor no Conserved 107838984
chr1 159880237 159880584 RUNX3 UCSC Txn Factor no Conserved 107839004
chr1 159880273 159880597 SP1 UCSC Txn Factor no Conserved 107839019
chr1 159880278 159880460 SRF UCSC Txn Factor no Conserved 107839023
chr1 159880116 159880131 TFAP2A JASPAR yes 118382615
chr1 159880116 159880131 TFAP2C JASPAR yes 118382616
chr1 159880119 159880130 TFAP2A JASPAR yes 118382617
chr1 159880119 159880130 TFAP2B JASPAR yes 118382618
chr1 159880119 159880130 TFAP2C JASPAR yes 118382619
chr1 159880120 159880129 TFAP2A JASPAR yes 118382620
chr1 159880134 159880155 ZNF263 JASPAR yes 118382621
chr1 159880139 159880149 SP1 JASPAR yes 118382622
chr1 159880144 159880150 MZF1 JASPAR yes 118382623
chr1 159880152 159880168 ZNF143 JASPAR yes 118382624
chr1 159880172 159880187 LEF1 JASPAR yes 118382625
chr1 159880173 159880194 IRF1 JASPAR yes 118382626
chr1 159880176 159880190 IRF7 JASPAR yes 118382627
chr1 159880190 159880194 YY1 TRANSFAC yes 118382628
chr1 159880193 159880196 MYB TRANSFAC yes 118382629
chr1 159880216 159880227 STAT3 JASPAR yes 118382630
chr1 159880223 159880238 RUNX2 JASPAR yes 118382631
chr1 159880234 159880246 YY1 JASPAR yes 118382632
chr1 159880245 159880252 SP1 TRANSFAC yes 118382633
chr1 159880246 159880253 SP1 TRANSFAC yes 118382634
chr1 159880247 159880252 SP1 TRANSFAC yes 118382635
chr1 159880247 159880253 SP1 TRANSFAC yes 118382636
chr1 159880255 159880259 H4TF2 TRANSFAC yes 118382637
chr1 159880280 159880285 GATA2 JASPAR yes 118382638
chr1 159880287 159880305 TP53 JASPAR yes 118382639
chr1 159880287 159880305 TP73 JASPAR yes 118382640
chr1 159880300 159880315 RFX5 JASPAR yes 118382641
chr1 159880314 159880324 MZF1 JASPAR yes 118382642
chr1 159880317 159880323 SP1 TRANSFAC yes 118382643
chr1 159880317 159880327 SP1 JASPAR yes 118382644
chr1 159880363 159880377 GATA2 JASPAR yes 118382645
chr1 159880365 159880373 GATA3 JASPAR yes 118382646
chr1 159880365 159880373 GATA5 JASPAR yes 118382647
chr1 159880365 159880386 ZNF263 JASPAR yes 118382648
chr1 159880377 159880387 MZF1 JASPAR yes 118382649
chr1 159880381 159880394 NFKB1 JASPAR yes 118382650
chr1 159880381 159880394 NFKB2 JASPAR yes 118382651
chr1 159880384 159880396 ZBTB7B JASPAR yes 118382652
chr1 159880384 159880396 ZBTB7C JASPAR yes 118382653
chr1 159880385 159880395 RUNX3 JASPAR yes 118382654
chr1 159880394 159880407 ELF1 JASPAR yes 118382655
chr1 159880395 159880407 EHF JASPAR yes 118382656
chr1 159880395 159880407 ELF1 JASPAR yes 118382657
chr1 159880395 159880407 ELF4 JASPAR yes 118382658
chr1 159880395 159880408 ELF3 JASPAR yes 118382659
chr1 159880396 159880407 ELF5 JASPAR yes 118382660
chr1 159880397 159880404 ETS1 TRANSFAC yes 118382661
chr1 159880397 159880407 ETV6 JASPAR yes 118382662
chr1 159880397 159880408 FLI1 JASPAR yes 118382663
chr1 159880398 159880406 EHF JASPAR yes 118382664
chr1 159880398 159880406 FEV JASPAR yes 118382665
chr1 159880399 159880406 SPI1 JASPAR yes 118382666
chr1 159880416 159880432 RFX2 JASPAR yes 118382667
chr1 159880416 159880432 RFX3 JASPAR yes 118382668
chr1 159880416 159880432 RFX4 JASPAR yes 118382669
chr1 159880416 159880432 RFX5 JASPAR yes 118382670
chr1 159880417 159880436 RFX2 JASPAR yes 118382671
chr1 159880419 159880434 RFX5 JASPAR yes 118382672
chr1 159880431 159880446 RUNX2 JASPAR yes 32500708
chr1 159880431 159880446 RUNX2 JASPAR yes 118382673
chr1 159880450 159880471 ZNF263 JASPAR yes 32500709
chr1 159880450 159880471 ZNF263 JASPAR yes 118382674
chr1 159880454 159880468 GLIS3 JASPAR yes 32500710
chr1 159880454 159880468 GLIS3 JASPAR yes 118382675
chr1 159880456 159880468 INSM1 JASPAR yes 32500711
chr1 159880456 159880468 INSM1 JASPAR yes 118382676
chr1 159880458 159880468 MZF1 JASPAR yes 32500712
chr1 159880458 159880468 MZF1 JASPAR yes 118382677
chr1 159880483 159880498 TFAP2A JASPAR yes 32500713
chr1 159880483 159880498 TFAP2A JASPAR yes 118382678
chr1 159880494 159880514 ESR1 JASPAR yes 32500714
chr1 159880494 159880514 ESR1 JASPAR yes 118382679
chr1 159880498 159880516 ESR1 JASPAR yes 32500715
chr1 159880498 159880516 ESR1 JASPAR yes 118382680
chr1 159880539 159880553 E2F7 JASPAR yes 32500716
chr1 159880539 159880553 E2F7 JASPAR yes 118382681
chr1 159880540 159880552 E2F8 JASPAR yes 32500717
chr1 159880540 159880552 E2F8 JASPAR yes 118382682
chr1 159880551 159880556 GATA2 JASPAR yes 32500718
chr1 159880551 159880556 GATA2 JASPAR yes 118382683
chr1 159880555 159880573 ESR1 JASPAR yes 32500719
chr1 159880555 159880573 ESR1 JASPAR yes 118382684
chr1 159880558 159880562 ESR1 TRANSFAC yes 32500720
chr1 159880558 159880562 ESR1 TRANSFAC yes 118382685
chr1 159880560 159880581 MAFG JASPAR yes 32500721
chr1 159880560 159880581 MAFG JASPAR yes 118382686
chr1 159880573 159880581 OTX2 JASPAR yes 32500722
chr1 159880573 159880581 OTX2 JASPAR yes 118382687
chr1 159880583 159880588 ETS2 TRANSFAC yes 32500723
chr1 159880583 159880588 ETS2 TRANSFAC yes 118382688
chr1 159880595 159880607 POU2F1 JASPAR yes 32500724
chr1 159880595 159880607 POU2F1 JASPAR yes 118382689
chr1 159880595 159880608 POU3F3 JASPAR yes 32500725
chr1 159880595 159880608 POU3F3 JASPAR yes 118382690
chr1 159880595 159880609 POU1F1 JASPAR yes 32500726
chr1 159880595 159880609 POU1F1 JASPAR yes 118382691
chr1 159880596 159880608 POU3F1 JASPAR yes 32500727
chr1 159880596 159880608 POU3F2 JASPAR yes 32500728
chr1 159880596 159880608 POU3F1 JASPAR yes 118382692
chr1 159880596 159880608 POU3F2 JASPAR yes 118382693
chr1 159880596 159880609 POU2F2 JASPAR yes 32500729
chr1 159880596 159880609 POU2F2 JASPAR yes 118382694
chr1 159880597 159880606 POU3F4 JASPAR yes 32500730
chr1 159880597 159880606 POU5F1B JASPAR yes 32500731
chr1 159880597 159880606 POU3F4 JASPAR yes 118382695
chr1 159880597 159880606 POU5F1B JASPAR yes 118382696
chr1 159880598 159880605 POU2F1 TRANSFAC yes 32500732
chr1 159880598 159880605 POU2F2 TRANSFAC yes 32500733
chr1 159880598 159880605 POU2F1 TRANSFAC yes 118382697
chr1 159880598 159880605 POU2F2 TRANSFAC yes 118382698
chr1 159880665 159880668 MYB TRANSFAC yes 32500734
chr1 159880665 159880668 MYB TRANSFAC yes 118382699
chr1 159880674 159880695 IRF1 JASPAR yes 32500735
chr1 159880674 159880695 IRF1 JASPAR yes 118382700
chr1 159880678 159880682 YY1 TRANSFAC yes 32500736
chr1 159880678 159880682 YY1 TRANSFAC yes 118382701
chr1 159880678 159880699 IRF1 JASPAR yes 32500737
chr1 159880678 159880699 IRF1 JASPAR yes 118382702
chr1 159880679 159880694 FOXP1 JASPAR yes 32500738
chr1 159880679 159880694 FOXP1 JASPAR yes 118382703
chr1 159880679 159880700 IRF1 JASPAR yes 32500739
chr1 159880679 159880700 IRF1 JASPAR yes 118382704
chr1 159880680 159880701 IRF1 JASPAR yes 32500740
chr1 159880680 159880701 IRF1 JASPAR yes 118382705
chr1 159880681 159880696 FOXP1 JASPAR yes 32500741
chr1 159880681 159880696 FOXP1 JASPAR yes 118382706
chr1 159880681 159880702 IRF1 JASPAR yes 32500742
chr1 159880681 159880702 IRF1 JASPAR yes 118382707
chr1 159880682 159880703 IRF1 JASPAR yes 32500743
chr1 159880682 159880703 IRF1 JASPAR yes 118382708
chr1 159880683 159880698 FOXP1 JASPAR yes 32500744
chr1 159880683 159880698 FOXP1 JASPAR yes 118382709
chr1 159880684 159880699 FOXP1 JASPAR yes 32500745
chr1 159880684 159880699 FOXP1 JASPAR yes 118382710
chr1 159880685 159880700 FOXP1 JASPAR yes 32500746
chr1 159880685 159880700 FOXP1 JASPAR yes 118382711
chr1 159880686 159880701 FOXP1 JASPAR yes 32500747
chr1 159880686 159880701 FOXP1 JASPAR yes 118382712
chr1 159880687 159880702 FOXP1 JASPAR yes 32500748
chr1 159880687 159880702 FOXP1 JASPAR yes 118382713
chr1 159880688 159880703 FOXP1 JASPAR yes 32500749
chr1 159880688 159880703 FOXP1 JASPAR yes 118382714
chr1 159880690 159880705 STAT2 JASPAR yes 32500750
chr1 159880690 159880705 STAT2 JASPAR yes 118382715
chr1 159880691 159880705 STAT1 JASPAR yes 32500751
chr1 159880691 159880705 STAT1 JASPAR yes 118382716
chr1 159880692 159880706 IRF7 JASPAR yes 32500752
chr1 159880692 159880706 IRF7 JASPAR yes 118382717
chr1 159880699 159880706 NFATC2 JASPAR yes 32500753
chr1 159880699 159880706 NFATC2 JASPAR yes 118382718
SNP sites on vista3562[chr1:159880076-159880706]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 159880215 rs113089677 G A
EBF1 GATA2 POLR2A
662540
chr1 159880250 rs143069183 G A,T
EBF1 GATA2 POLR2A RUNX3 SP1
662541
chr1 159880292 rs186726072 C T
EBF1 GATA2 POLR2A RUNX3 SP1 SRF TP53 TP73
662542
chr1 159880319 rs527398736 C T
EBF1 GATA2 MZF1 POLR2A RUNX3 SP1 SRF
662543
chr1 159880328 rs551958535 G A
EBF1 GATA2 POLR2A RUNX3 SP1 SRF
662544
chr1 159880466 rs191158541 G T
EBF1 GATA2 GLIS3 INSM1 MZF1 POLR2A RUNX3 SP1 ZNF263
662545
chr1 159880549 rs554779098 G A
E2F7 E2F8 GATA2 POLR2A RUNX3 SP1
662546
chr1 159880579 rs143812047 T C
MAFG OTX2 POLR2A RUNX3 SP1
662547
chr1 159880660 rs7522000 T C
POLR2A
662548
chr1 159880663 rs187458174 G A
POLR2A
662549
Genes possibly regulated by vista3562[chr1:159880076-159880706]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 159796540 159807039 + SLAMF8 ENSG00000158714.6 159796540 0.84 1.0 1431 16464
chr1 159804264 159825137 - C1orf204 ENSG00000188004.5 159825137 0.77 1.0 1432 45061
chr1 159824106 159832447 - VSIG8 ENSG00000243284.1 159832447 0.95 1.0 1433 52371
chr1 159827690 159842843 - RP11-190A12.7 ENSG00000256029.1 159842843 0.98 1.0 1434 62767
chr1 159842154 159869953 - CCDC19 ENSG00000213085.5 159869953 0.94 1.0 1435 89877
chr1 159879884 159880159 - AL590560.1 ENSG00000269620.1 159880159 0.94 0.98 1436 0
chr1 159887897 159895522 - TAGLN2 ENSG00000158710.10 159895522 0.78 0.99 1437 85184
chr1 159896829 159915386 - IGSF9 ENSG00000085552.12 159915386 0.91 1.0 1438 65320
chr1 159921282 159924044 - SLAMF9 ENSG00000162723.5 159924044 0.94 0.99 1439 56662
Expression level of Genes
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miRNAs possibly regulated by vista3562[chr1:159880076-159880706]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results