EnhancerDB
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  3. vista3570[chr1:160056214-160056779]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3570[chr1:160056214-160056779]
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Tissue distribution of vista3570
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Transcription factor that possibly regulate vista3570[chr1:160056214-160056779]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160056214 160056218 NFE TRANSFAC yes 118383046
chr1 160056216 160056231 FOXP1 JASPAR yes 118383047
chr1 160056232 160056240 GATA3 JASPAR yes 118383048
chr1 160056256 160056260 YY1 TRANSFAC yes 118383049
chr1 160056304 160056314 POU6F2 JASPAR yes 118383050
chr1 160056329 160056345 POU4F2 JASPAR yes 118383051
chr1 160056329 160056345 POU4F3 JASPAR yes 118383052
chr1 160056331 160056335 YY1 TRANSFAC yes 118383053
chr1 160056331 160056345 POU4F1 JASPAR yes 118383054
chr1 160056336 160056347 BATF JASPAR yes 118383055
chr1 160056339 160056354 FOXA1 JASPAR yes 118383056
chr1 160056340 160056351 FOXB1 JASPAR yes 118383057
chr1 160056340 160056351 FOXC1 JASPAR yes 118383058
chr1 160056340 160056352 FOXC2 JASPAR yes 118383059
chr1 160056342 160056354 MEF2A JASPAR yes 118383060
chr1 160056342 160056354 MEF2D JASPAR yes 118383061
chr1 160056348 160056352 TEAD2 TRANSFAC yes 118383062
chr1 160056348 160056353 TBP TRANSFAC yes 118383063
chr1 160056348 160056354 TFIID TRANSFAC yes 118383064
chr1 160056357 160056367 MEF2A JASPAR yes 118383065
chr1 160056360 160056364 YY1 TRANSFAC yes 118383066
chr1 160056371 160056377 TBP TRANSFAC yes 118383067
chr1 160056373 160056387 ONECUT3 JASPAR yes 118383068
chr1 160056381 160056393 DBP JASPAR yes 118383069
chr1 160056381 160056393 HLF JASPAR yes 118383070
chr1 160056381 160056393 TEF JASPAR yes 118383071
chr1 160056383 160056394 NFIL3 JASPAR yes 118383072
chr1 160056419 160056434 AR JASPAR yes 118383073
chr1 160056450 160056464 CREB3L1 JASPAR yes 118383074
chr1 160056481 160056496 JUND JASPAR yes 118383075
chr1 160056481 160056498 ZNF410 JASPAR yes 118383076
chr1 160056482 160056495 JUN JASPAR yes 118383077
chr1 160056483 160056494 NFIL3 JASPAR yes 118383078
chr1 160056484 160056495 CEBPA JASPAR yes 118383079
chr1 160056484 160056496 DBP JASPAR yes 118383080
chr1 160056484 160056496 HLF JASPAR yes 118383081
chr1 160056484 160056496 JDP2 JASPAR yes 118383082
chr1 160056484 160056496 TEF JASPAR yes 118383083
chr1 160056485 160056496 CEBPB JASPAR yes 118383084
chr1 160056486 160056497 NFIL3 JASPAR yes 118383085
chr1 160056497 160056502 GATA2 JASPAR yes 118383086
chr1 160056509 160056524 PRDM1 JASPAR yes 118383087
chr1 160056509 160056527 IRF2 JASPAR yes 118383088
chr1 160056516 160056537 REST JASPAR yes 118383089
chr1 160056526 160056545 CTCF JASPAR yes 118383090
chr1 160056553 160056559 MYC TRANSFAC yes 118383091
chr1 160056576 160056581 MYC TRANSFAC yes 118383092
chr1 160056578 160056588 NFATC3 JASPAR yes 118383093
chr1 160056580 160056587 NFATC2 JASPAR yes 118383094
chr1 160056653 160056664 STAT3 JASPAR yes 118383095
chr1 160056657 160056664 NFATC2 JASPAR yes 118383096
chr1 160056659 160056673 RORA JASPAR yes 118383097
chr1 160056662 160056672 RORA JASPAR yes 118383098
chr1 160056667 160056671 ESR1 TRANSFAC yes 118383099
chr1 160056685 160056691 PEA3 TRANSFAC yes 118383100
chr1 160056711 160056722 FOXA1 JASPAR yes 118383101
chr1 160056739 160056750 FOXP2 JASPAR yes 118383102
chr1 160056741 160056749 FOXO3 JASPAR yes 118383103
chr1 160056755 160056767 TEAD1 JASPAR yes 118383104
chr1 160056756 160056777 ZNF263 JASPAR yes 118383105
chr1 160056764 160056773 NKX2-8 JASPAR yes 118383106
chr1 160056764 160056774 NKX2-3 JASPAR yes 118383107
chr1 160056769 160056779 SP1 JASPAR yes 118383108
chr1 160056769 160056779 ZNF740 JASPAR yes 118383109
chr1 160056771 160056777 MAZ TRANSFAC yes 118383110
SNP sites on vista3570[chr1:160056214-160056779]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160056395 rs148178456 C T no 663786
chr1 160056468 rs115369235 G A no 663787
chr1 160056534 rs138809101 AAG A
CTCF REST
663788
chr1 160056534 rs74441089 AAG A
CTCF REST
663789
chr1 160056683 rs115750375 C T no 663790
chr1 160056716 rs114226495 G C
FOXA1
663791
Genes possibly regulated by vista3570[chr1:160056214-160056779]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 159997462 160001783 - PIGM ENSG00000143315.5 160001783 0.66 0.98 1440 45569
chr1 160007257 160040038 - KCNJ10 ENSG00000177807.6 160040038 0.97 0.97 1441 83824
chr1 160051360 160060353 + KCNJ9 ENSG00000162728.4 160051360 0.84 1.0 1442 95146
chr1 160061130 160068733 - IGSF8 ENSG00000162729.9 160068733 0.65 1.0 1443 88046
chr1 160085549 160113381 + ATP1A2 ENSG00000018625.10 160085549 0.9 0.91 1444 71230
chr1 160121360 160156767 + ATP1A4 ENSG00000132681.12 160121360 0.93 1.0 1445 35419
Expression level of Genes
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miRNAs possibly regulated by vista3570[chr1:160056214-160056779]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results