EnhancerDB
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  3. vista35755[chr20:3788108-3788452]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35755[chr20:3788108-3788452]
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Tissue distribution of vista35755
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Transcription factor that possibly regulate vista35755[chr20:3788108-3788452]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 3787788 3789274 POLR2A UCSC Txn Factor no Conserved 108439960
chr20 3788063 3788411 TFAP2C UCSC Txn Factor no Conserved 108439975
chr20 3788106 3788353 TFAP2A UCSC Txn Factor no Conserved 108439982
chr20 3788228 3788498 USF1 UCSC Txn Factor no Conserved 108439996
chr20 3788235 3788499 USF2 UCSC Txn Factor no Conserved 108440000
chr20 3788107 3788115 ISL2 JASPAR yes 49579030
chr20 3788107 3788115 ISL2 JASPAR yes 113940752
chr20 3788107 3788116 NKX3-2 JASPAR yes 49579031
chr20 3788107 3788116 NKX3-2 JASPAR yes 113940753
chr20 3788135 3788145 SP1 JASPAR yes 49579032
chr20 3788135 3788145 SP1 JASPAR yes 113940754
chr20 3788136 3788147 E2F6 JASPAR yes 49579033
chr20 3788136 3788147 E2F6 JASPAR yes 113940755
chr20 3788192 3788207 TFAP2A JASPAR yes 49579034
chr20 3788192 3788207 TFAP2C JASPAR yes 49579035
chr20 3788192 3788207 TFAP2A JASPAR yes 113940756
chr20 3788192 3788207 TFAP2C JASPAR yes 113940757
chr20 3788195 3788207 TFAP2A JASPAR yes 49579036
chr20 3788195 3788207 TFAP2B JASPAR yes 49579037
chr20 3788195 3788207 TFAP2C JASPAR yes 49579038
chr20 3788195 3788207 TFAP2A JASPAR yes 113940758
chr20 3788195 3788207 TFAP2B JASPAR yes 113940759
chr20 3788195 3788207 TFAP2C JASPAR yes 113940760
chr20 3788195 3788210 TFAP2A JASPAR yes 49579039
chr20 3788195 3788210 TFAP2A JASPAR yes 113940761
chr20 3788196 3788205 TFAP2A JASPAR yes 49579040
chr20 3788196 3788205 TFAP2A JASPAR yes 113940762
chr20 3788197 3788206 TFAP2A JASPAR yes 49579041
chr20 3788197 3788206 TFAP2A JASPAR yes 113940763
chr20 3788202 3788206 LFA1 TRANSFAC yes 49579042
chr20 3788202 3788206 LFA1 TRANSFAC yes 113940764
chr20 3788230 3788234 NFE TRANSFAC yes 49579043
chr20 3788230 3788234 NFE TRANSFAC yes 113940765
chr20 3788231 3788236 GATA2 JASPAR yes 49579044
chr20 3788231 3788236 GATA2 JASPAR yes 113940766
chr20 3788240 3788251 STAT3 JASPAR yes 49579045
chr20 3788240 3788251 STAT3 JASPAR yes 113940767
chr20 3788251 3788256 GATA2 JASPAR yes 49579046
chr20 3788251 3788256 GATA2 JASPAR yes 113940768
chr20 3788252 3788273 ZNF263 JASPAR yes 49579047
chr20 3788252 3788273 ZNF263 JASPAR yes 113940769
chr20 3788254 3788264 SP1 JASPAR yes 49579048
chr20 3788254 3788264 SP1 JASPAR yes 113940770
chr20 3788258 3788273 NR2C2 JASPAR yes 49579049
chr20 3788258 3788273 NR2C2 JASPAR yes 113940771
chr20 3788259 3788273 PLAG1 JASPAR yes 49579050
chr20 3788259 3788273 PLAG1 JASPAR yes 113940772
chr20 3788259 3788280 ZNF263 JASPAR yes 49579051
chr20 3788259 3788280 ZNF263 JASPAR yes 113940773
chr20 3788260 3788274 PLAG1 JASPAR yes 49579052
chr20 3788260 3788274 PLAG1 JASPAR yes 113940774
chr20 3788266 3788283 ZNF410 JASPAR yes 49579053
chr20 3788266 3788283 ZNF410 JASPAR yes 113940775
chr20 3788287 3788299 TFAP2A JASPAR yes 49579054
chr20 3788287 3788299 TFAP2B JASPAR yes 49579055
chr20 3788287 3788299 TFAP2C JASPAR yes 49579056
chr20 3788287 3788299 TFAP2A JASPAR yes 113940776
chr20 3788287 3788299 TFAP2B JASPAR yes 113940777
chr20 3788287 3788299 TFAP2C JASPAR yes 113940778
chr20 3788287 3788302 TFAP2A JASPAR yes 49579057
chr20 3788287 3788302 TFAP2A JASPAR yes 113940779
chr20 3788289 3788298 TFAP2A JASPAR yes 49579058
chr20 3788289 3788298 TFAP2A JASPAR yes 113940780
chr20 3788294 3788299 SP1 TRANSFAC yes 49579059
chr20 3788294 3788299 SP1 TRANSFAC yes 113940781
chr20 3788295 3788300 SP1 TRANSFAC yes 49579060
chr20 3788295 3788300 SP1 TRANSFAC yes 113940782
chr20 3788299 3788304 SP1 TRANSFAC yes 49579061
chr20 3788299 3788304 SP1 TRANSFAC yes 113940783
chr20 3788302 3788322 ESR1 JASPAR yes 49579062
chr20 3788302 3788322 ESR1 JASPAR yes 113940784
chr20 3788308 3788312 LFA1 TRANSFAC yes 49579063
chr20 3788308 3788312 LFA1 TRANSFAC yes 113940785
chr20 3788352 3788362 SREBF1 JASPAR yes 49579064
chr20 3788352 3788362 SREBF2 JASPAR yes 49579065
chr20 3788352 3788362 SREBF1 JASPAR yes 113940786
chr20 3788352 3788362 SREBF2 JASPAR yes 113940787
chr20 3788355 3788369 CREB3 JASPAR yes 49579066
chr20 3788355 3788369 CREB3L1 JASPAR yes 49579067
chr20 3788355 3788369 CREB3 JASPAR yes 113940788
chr20 3788355 3788369 CREB3L1 JASPAR yes 113940789
chr20 3788356 3788366 MAX JASPAR yes 49579068
chr20 3788356 3788366 MAX JASPAR yes 113940790
chr20 3788356 3788367 USF1 JASPAR yes 49579069
chr20 3788356 3788367 USF2 JASPAR yes 49579070
chr20 3788356 3788367 USF1 JASPAR yes 113940791
chr20 3788356 3788367 USF2 JASPAR yes 113940792
chr20 3788357 3788367 BHLHE41 JASPAR yes 49579071
chr20 3788357 3788367 MAX JASPAR yes 49579072
chr20 3788357 3788367 MLXIPL JASPAR yes 49579073
chr20 3788357 3788367 MLX JASPAR yes 49579074
chr20 3788357 3788367 MNT JASPAR yes 49579075
chr20 3788357 3788367 SREBF2 JASPAR yes 49579076
chr20 3788357 3788367 TFE3 JASPAR yes 49579077
chr20 3788357 3788367 TFEB JASPAR yes 49579078
chr20 3788357 3788367 TFEC JASPAR yes 49579079
chr20 3788357 3788367 BHLHE41 JASPAR yes 113940793
chr20 3788357 3788367 MAX JASPAR yes 113940794
chr20 3788357 3788367 MLXIPL JASPAR yes 113940795
chr20 3788357 3788367 MLX JASPAR yes 113940796
chr20 3788357 3788367 MNT JASPAR yes 113940797
chr20 3788357 3788367 SREBF2 JASPAR yes 113940798
chr20 3788357 3788367 TFE3 JASPAR yes 113940799
chr20 3788357 3788367 TFEB JASPAR yes 113940800
chr20 3788357 3788367 TFEC JASPAR yes 113940801
chr20 3788357 3788368 USF1 JASPAR yes 49579080
chr20 3788357 3788368 USF1 JASPAR yes 113940802
chr20 3788358 3788365 USF1 JASPAR yes 49579081
chr20 3788358 3788365 USF1 JASPAR yes 113940803
chr20 3788358 3788368 MAX JASPAR yes 49579082
chr20 3788358 3788368 MAX JASPAR yes 113940804
chr20 3788359 3788364 MYC TRANSFAC yes 49579083
chr20 3788359 3788364 USF1 TRANSFAC yes 49579084
chr20 3788359 3788364 USF2 TRANSFAC yes 49579085
chr20 3788359 3788364 MYC TRANSFAC yes 113940805
chr20 3788359 3788364 USF1 TRANSFAC yes 113940806
chr20 3788359 3788364 USF2 TRANSFAC yes 113940807
chr20 3788369 3788375 PEA3 TRANSFAC yes 49579086
chr20 3788369 3788375 PEA3 TRANSFAC yes 113940808
chr20 3788378 3788388 SREBF1 JASPAR yes 49579087
chr20 3788378 3788388 SREBF2 JASPAR yes 49579088
chr20 3788378 3788388 SREBF1 JASPAR yes 113940809
chr20 3788378 3788388 SREBF2 JASPAR yes 113940810
chr20 3788396 3788405 HIC2 JASPAR yes 49579089
chr20 3788396 3788405 HIC2 JASPAR yes 113940811
chr20 3788401 3788415 TLX1 JASPAR yes 49579090
chr20 3788401 3788415 TLX1 JASPAR yes 113940812
chr20 3788403 3788424 REST JASPAR yes 49579091
chr20 3788403 3788424 REST JASPAR yes 113940813
chr20 3788404 3788423 REST JASPAR yes 49579092
chr20 3788404 3788423 REST JASPAR yes 113940814
chr20 3788405 3788411 SOX10 JASPAR yes 49579093
chr20 3788405 3788411 SOX10 JASPAR yes 113940815
chr20 3788411 3788421 ID4 JASPAR yes 49579094
chr20 3788411 3788421 TCF3 JASPAR yes 49579095
chr20 3788411 3788421 TCF4 JASPAR yes 49579096
chr20 3788411 3788421 ID4 JASPAR yes 113940816
chr20 3788411 3788421 TCF3 JASPAR yes 113940817
chr20 3788411 3788421 TCF4 JASPAR yes 113940818
chr20 3788432 3788445 ZBTB18 JASPAR yes 49579097
chr20 3788432 3788445 ZBTB18 JASPAR yes 113940819
chr20 3788438 3788442 NFE TRANSFAC yes 49579098
chr20 3788438 3788442 NFE TRANSFAC yes 113940820
chr20 3788441 3788447 MZF1 JASPAR yes 49579099
chr20 3788441 3788447 MZF1 JASPAR yes 113940821
chr20 3788450 3788453 MYB TRANSFAC yes 49579100
chr20 3788450 3788453 MYB TRANSFAC yes 113940822
SNP sites on vista35755[chr20:3788108-3788452]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35755[chr20:3788108-3788452]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 3713314 3733758 + HSPA12B ENSG00000132622.6 3713314 0.8 1.0 18247 25206
chr20 3734155 3749034 - C20orf27 ENSG00000101220.13 3749034 0.69 1.0 18248 60926
chr20 3758151 3762095 - SPEF1 ENSG00000101222.8 3762095 0.89 1.0 18249 73987
chr20 3764498 3767337 - CENPB ENSG00000125817.7 3767337 0.68 0.99 18250 79229
chr20 3767578 3786762 + CDC25B ENSG00000101224.13 3767578 0.77 1.0 18251 79470
chr20 3801178 3805949 + AP5S1 ENSG00000125843.6 3801178 0.62 0.99 18252 87274
chr20 3827487 3849280 + MAVS ENSG00000088888.13 3827487 0.6 1.0 18253 60965
chr20 3869486 3907605 + PANK2 ENSG00000125779.17 3869486 0.63 0.99 18254 18966
Expression level of Genes
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miRNAs possibly regulated by vista35755[chr20:3788108-3788452]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results