EnhancerDB
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  3. vista35759[chr20:3961377-3961729]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35759[chr20:3961377-3961729]
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Tissue distribution of vista35759
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Transcription factor that possibly regulate vista35759[chr20:3961377-3961729]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 3961397 3961762 YY1 UCSC Txn Factor no Conserved 108440060
chr20 3961445 3961711 CEBPB UCSC Txn Factor no Conserved 108440072
chr20 3961473 3961704 REST UCSC Txn Factor no Conserved 108440079
chr20 3961480 3961698 CEBPD UCSC Txn Factor no Conserved 108440081
chr20 3961583 3961781 FOXA1 UCSC Txn Factor no Conserved 108440090
chr20 3961360 3961378 RARA JASPAR yes 49584462
chr20 3961360 3961378 RARA JASPAR yes 113940963
chr20 3961374 3961389 HNF4A JASPAR yes 49584465
chr20 3961374 3961389 HNF4A JASPAR yes 113940964
chr20 3961375 3961390 HNF4G JASPAR yes 49584466
chr20 3961375 3961390 HNF4G JASPAR yes 113940965
chr20 3961389 3961409 TP63 JASPAR yes 49584467
chr20 3961389 3961409 TP63 JASPAR yes 113940966
chr20 3961392 3961407 TP53 JASPAR yes 49584468
chr20 3961392 3961407 TP53 JASPAR yes 113940967
chr20 3961400 3961415 SOX21 JASPAR yes 49584469
chr20 3961400 3961415 SOX21 JASPAR yes 113940968
chr20 3961406 3961410 YY1 TRANSFAC yes 49584470
chr20 3961406 3961410 YY1 TRANSFAC yes 113940969
chr20 3961408 3961414 TCF4 TRANSFAC yes 49584471
chr20 3961408 3961414 TCF4 TRANSFAC yes 113940970
chr20 3961460 3961472 POU3F1 JASPAR yes 49584472
chr20 3961460 3961472 POU3F2 JASPAR yes 49584473
chr20 3961460 3961472 POU3F1 JASPAR yes 113940971
chr20 3961460 3961472 POU3F2 JASPAR yes 113940972
chr20 3961460 3961473 POU3F3 JASPAR yes 49584474
chr20 3961460 3961473 POU3F3 JASPAR yes 113940973
chr20 3961461 3961473 POU2F1 JASPAR yes 49584475
chr20 3961461 3961473 POU2F1 JASPAR yes 113940974
chr20 3961464 3961467 MYB TRANSFAC yes 49584476
chr20 3961464 3961467 MYB TRANSFAC yes 113940975
chr20 3961465 3961480 MEF2C JASPAR yes 49584477
chr20 3961465 3961480 MEF2C JASPAR yes 113940976
chr20 3961466 3961481 MEF2A JASPAR yes 49584478
chr20 3961466 3961481 MEF2A JASPAR yes 113940977
chr20 3961467 3961479 MEF2A JASPAR yes 49584479
chr20 3961467 3961479 MEF2A JASPAR yes 113940978
chr20 3961471 3961484 POU3F3 JASPAR yes 49584480
chr20 3961471 3961484 POU3F3 JASPAR yes 113940979
chr20 3961498 3961508 RORA JASPAR yes 49584481
chr20 3961498 3961508 RORA JASPAR yes 113940980
chr20 3961499 3961510 ESRRA JASPAR yes 49584482
chr20 3961499 3961510 ESRRA JASPAR yes 113940981
chr20 3961501 3961509 NR4A2 JASPAR yes 49584483
chr20 3961501 3961509 NR4A2 JASPAR yes 113940982
chr20 3961503 3961507 ESR1 TRANSFAC yes 49584484
chr20 3961503 3961507 ESR1 TRANSFAC yes 113940983
chr20 3961515 3961518 MYB TRANSFAC yes 49584485
chr20 3961515 3961518 MYB TRANSFAC yes 113940984
chr20 3961547 3961562 TFAP2C JASPAR yes 49584486
chr20 3961547 3961562 TFAP2C JASPAR yes 113940985
chr20 3961561 3961576 HNF4A JASPAR yes 49584487
chr20 3961561 3961576 HNF4A JASPAR yes 113940986
chr20 3961562 3961576 NR2F1 JASPAR yes 49584488
chr20 3961562 3961576 NR2F1 JASPAR yes 113940987
chr20 3961562 3961577 HNF4G JASPAR yes 49584489
chr20 3961562 3961577 NR2C2 JASPAR yes 49584490
chr20 3961562 3961577 HNF4G JASPAR yes 113940988
chr20 3961562 3961577 NR2C2 JASPAR yes 113940989
chr20 3961578 3961590 YY1 JASPAR yes 49584491
chr20 3961578 3961590 YY1 JASPAR yes 113940990
chr20 3961588 3961599 CEBPB JASPAR yes 49584492
chr20 3961588 3961599 CEBPB JASPAR yes 113940991
chr20 3961588 3961600 HLF JASPAR yes 49584493
chr20 3961588 3961600 HLF JASPAR yes 113940992
chr20 3961589 3961599 CEBPB JASPAR yes 49584494
chr20 3961589 3961599 CEBPD JASPAR yes 49584495
chr20 3961589 3961599 CEBPE JASPAR yes 49584496
chr20 3961589 3961599 CEBPG JASPAR yes 49584497
chr20 3961589 3961599 CEBPB JASPAR yes 113940993
chr20 3961589 3961599 CEBPD JASPAR yes 113940994
chr20 3961589 3961599 CEBPE JASPAR yes 113940995
chr20 3961589 3961599 CEBPG JASPAR yes 113940996
chr20 3961589 3961600 CEBPA JASPAR yes 49584498
chr20 3961589 3961600 CEBPA JASPAR yes 113940997
chr20 3961596 3961604 HOXA5 JASPAR yes 49584499
chr20 3961596 3961604 HOXA5 JASPAR yes 113940998
chr20 3961598 3961618 RREB1 JASPAR yes 49584500
chr20 3961598 3961618 RREB1 JASPAR yes 113940999
chr20 3961600 3961620 RREB1 JASPAR yes 49584501
chr20 3961600 3961620 RREB1 JASPAR yes 113941000
chr20 3961602 3961622 RREB1 JASPAR yes 49584502
chr20 3961602 3961622 RREB1 JASPAR yes 113941001
chr20 3961603 3961623 RREB1 JASPAR yes 49584503
chr20 3961603 3961623 RREB1 JASPAR yes 113941002
chr20 3961611 3961621 ZNF740 JASPAR yes 49584504
chr20 3961611 3961621 ZNF740 JASPAR yes 113941003
chr20 3961612 3961622 ZNF740 JASPAR yes 49584505
chr20 3961612 3961622 ZNF740 JASPAR yes 113941004
chr20 3961613 3961623 ZNF740 JASPAR yes 49584506
chr20 3961613 3961623 ZNF740 JASPAR yes 113941005
chr20 3961614 3961635 ZNF263 JASPAR yes 49584507
chr20 3961614 3961635 ZNF263 JASPAR yes 113941006
chr20 3961615 3961629 PLAG1 JASPAR yes 49584508
chr20 3961615 3961629 PLAG1 JASPAR yes 113941007
chr20 3961615 3961636 ZNF263 JASPAR yes 49584509
chr20 3961615 3961636 ZNF263 JASPAR yes 113941008
chr20 3961616 3961630 PLAG1 JASPAR yes 49584510
chr20 3961616 3961630 PLAG1 JASPAR yes 113941009
chr20 3961616 3961631 NR2C2 JASPAR yes 49584511
chr20 3961616 3961631 NR2C2 JASPAR yes 113941010
chr20 3961617 3961627 SP1 JASPAR yes 49584512
chr20 3961617 3961627 SP1 JASPAR yes 113941011
chr20 3961617 3961638 ZNF263 JASPAR yes 49584513
chr20 3961617 3961638 ZNF263 JASPAR yes 113941012
chr20 3961618 3961628 SP1 JASPAR yes 49584514
chr20 3961618 3961628 SP1 JASPAR yes 113941013
chr20 3961619 3961623 LFA1 TRANSFAC yes 49584515
chr20 3961619 3961623 LFA1 TRANSFAC yes 113941014
chr20 3961619 3961631 INSM1 JASPAR yes 49584516
chr20 3961619 3961631 INSM1 JASPAR yes 113941015
chr20 3961622 3961637 NR2C2 JASPAR yes 49584517
chr20 3961622 3961637 NR2C2 JASPAR yes 113941016
chr20 3961624 3961633 SP1 TRANSFAC yes 49584518
chr20 3961624 3961633 SP1 TRANSFAC yes 113941017
chr20 3961624 3961634 SP1 JASPAR yes 49584519
chr20 3961624 3961634 SP1 JASPAR yes 113941018
chr20 3961625 3961635 SP1 JASPAR yes 49584520
chr20 3961625 3961635 SP1 JASPAR yes 113941019
chr20 3961626 3961632 MAZ TRANSFAC yes 49584521
chr20 3961626 3961632 MAZ TRANSFAC yes 113941020
chr20 3961630 3961637 SP1 TRANSFAC yes 49584522
chr20 3961630 3961637 SP1 TRANSFAC yes 113941021
chr20 3961632 3961637 SP1 TRANSFAC yes 49584523
chr20 3961632 3961637 SP1 TRANSFAC yes 113941022
chr20 3961656 3961671 SOX21 JASPAR yes 49584524
chr20 3961656 3961671 SOX21 JASPAR yes 113941023
chr20 3961662 3961680 ESR1 JASPAR yes 49584525
chr20 3961662 3961680 ESR1 JASPAR yes 113941024
chr20 3961691 3961702 YY2 JASPAR yes 49584526
chr20 3961691 3961702 YY2 JASPAR yes 113941025
chr20 3961697 3961701 YY1 TRANSFAC yes 49584527
chr20 3961697 3961701 YY1 TRANSFAC yes 113941026
chr20 3961707 3961711 YY1 TRANSFAC yes 49584528
chr20 3961707 3961711 YY1 TRANSFAC yes 113941027
chr20 3961716 3961730 GATA2 JASPAR yes 49584529
chr20 3961716 3961730 GATA2 JASPAR yes 113941028
chr20 3961720 3961728 GATA5 JASPAR yes 49584530
chr20 3961720 3961728 GATA5 JASPAR yes 113941029
chr20 3961726 3961740 SPI1 JASPAR yes 49584531
chr20 3961726 3961740 SPIC JASPAR yes 49584532
chr20 3961726 3961740 SPI1 JASPAR yes 113941030
chr20 3961726 3961740 SPIC JASPAR yes 113941031
chr20 3961727 3961734 SPI1 JASPAR yes 49584533
chr20 3961727 3961734 SPI1 JASPAR yes 113941032
SNP sites on vista35759[chr20:3961377-3961729]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35759[chr20:3961377-3961729]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 3869486 3907605 + PANK2 ENSG00000125779.17 3869486 0.63 0.99 18254 8109
chr20 3907956 3996229 - RNF24 ENSG00000101236.12 3996229 0.75 0.99 18255 65500
chr20 4050799 4055812 - RP11-352D3.2 ENSG00000205300.3 4055812 1.0 0.99 18256 5917
Expression level of Genes
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miRNAs possibly regulated by vista35759[chr20:3961377-3961729]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results