EnhancerDB
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  3. vista35766[chr20:4065883-4066158]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35766[chr20:4065883-4066158]
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Tissue distribution of vista35766
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Transcription factor that possibly regulate vista35766[chr20:4065883-4066158]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 4065760 4066451 POLR2A UCSC Txn Factor no Conserved 108440331
chr20 4065897 4066311 CTCF UCSC Txn Factor no Conserved 108440353
chr20 4065930 4066194 RAD21 UCSC Txn Factor no Conserved 108440372
chr20 4065933 4066212 SMC3 UCSC Txn Factor no Conserved 108440375
chr20 4065866 4065886 RREB1 JASPAR yes 49596948
chr20 4065866 4065886 RREB1 JASPAR yes 113941451
chr20 4065899 4065905 SOX10 JASPAR yes 49596950
chr20 4065899 4065905 SOX10 JASPAR yes 113941452
chr20 4065938 4065950 PROX1 JASPAR yes 49596951
chr20 4065938 4065950 PROX1 JASPAR yes 113941453
chr20 4065953 4065964 EBF1 JASPAR yes 49596952
chr20 4065953 4065964 EBF1 JASPAR yes 113941454
chr20 4065998 4066013 PRDM1 JASPAR yes 49596953
chr20 4065998 4066013 PRDM1 JASPAR yes 113941455
chr20 4066018 4066033 STAT1 JASPAR yes 49596954
chr20 4066018 4066033 STAT1 JASPAR yes 113941456
chr20 4066020 4066031 STAT1 JASPAR yes 49596955
chr20 4066020 4066031 STAT3 JASPAR yes 49596956
chr20 4066020 4066031 STAT1 JASPAR yes 113941457
chr20 4066020 4066031 STAT3 JASPAR yes 113941458
chr20 4066043 4066064 REST JASPAR yes 49596957
chr20 4066043 4066064 REST JASPAR yes 113941459
chr20 4066044 4066063 REST JASPAR yes 49596958
chr20 4066044 4066063 REST JASPAR yes 113941460
chr20 4066061 4066071 NHLH1 JASPAR yes 49596959
chr20 4066061 4066071 NHLH1 JASPAR yes 113941461
chr20 4066064 4066083 CTCF JASPAR yes 49596960
chr20 4066064 4066083 CTCF JASPAR yes 113941462
chr20 4066066 4066072 NFE2 TRANSFAC yes 49596961
chr20 4066066 4066072 NFE2 TRANSFAC yes 113941463
chr20 4066067 4066081 ZIC1 JASPAR yes 49596962
chr20 4066067 4066081 ZIC1 JASPAR yes 113941464
chr20 4066067 4066082 ZIC3 JASPAR yes 49596963
chr20 4066067 4066082 ZIC4 JASPAR yes 49596964
chr20 4066067 4066082 ZIC3 JASPAR yes 113941465
chr20 4066067 4066082 ZIC4 JASPAR yes 113941466
chr20 4066078 4066082 ESR1 TRANSFAC yes 49596965
chr20 4066078 4066082 ESR1 TRANSFAC yes 113941467
chr20 4066080 4066095 RUNX2 JASPAR yes 49596966
chr20 4066080 4066095 RUNX2 JASPAR yes 113941468
chr20 4066088 4066100 INSM1 JASPAR yes 49596967
chr20 4066088 4066100 INSM1 JASPAR yes 113941469
chr20 4066095 4066101 NFIC JASPAR yes 49596968
chr20 4066095 4066101 NFIC JASPAR yes 113941470
chr20 4066105 4066115 SP1 JASPAR yes 49596969
chr20 4066105 4066115 SP1 JASPAR yes 113941471
chr20 4066114 4066118 YY1 TRANSFAC yes 49596970
chr20 4066114 4066118 YY1 TRANSFAC yes 113941472
chr20 4066116 4066126 NFATC3 JASPAR yes 49596971
chr20 4066116 4066126 NFATC3 JASPAR yes 113941473
chr20 4066117 4066124 NFATC2 JASPAR yes 49596972
chr20 4066117 4066124 NFATC2 JASPAR yes 113941474
chr20 4066117 4066131 E2F7 JASPAR yes 49596973
chr20 4066117 4066131 E2F7 JASPAR yes 113941475
chr20 4066153 4066156 MYB TRANSFAC yes 49596974
chr20 4066153 4066156 MYB TRANSFAC yes 113941476
SNP sites on vista35766[chr20:4065883-4066158]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35766[chr20:4065883-4066158]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 3907956 3996229 - RNF24 ENSG00000101236.12 3996229 0.75 0.99 18255 30346
chr20 4050799 4055812 - RP11-352D3.2 ENSG00000205300.3 4055812 1.0 0.99 18256 89929
chr20 4101627 4168394 + SMOX ENSG00000088826.13 4101627 0.73 1.0 18257 64531
Expression level of Genes
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miRNAs possibly regulated by vista35766[chr20:4065883-4066158]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results