EnhancerDB
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  3. vista35771[chr20:4090299-4090467]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35771[chr20:4090299-4090467]
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Tissue distribution of vista35771
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Transcription factor that possibly regulate vista35771[chr20:4090299-4090467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr20 4090161 4090537 TCF7L2 UCSC Txn Factor no Conserved 108440560
chr20 4090315 4090551 TFAP2C UCSC Txn Factor no Conserved 108440572
chr20 4090303 4090307 LFA1 TRANSFAC yes 49599413
chr20 4090303 4090307 LFA1 TRANSFAC yes 113941594
chr20 4090308 4090322 TCF7L2 JASPAR yes 49599414
chr20 4090308 4090322 TCF7L2 JASPAR yes 113941595
chr20 4090308 4090323 LEF1 JASPAR yes 49599415
chr20 4090308 4090323 LEF1 JASPAR yes 113941596
chr20 4090312 4090318 TCF4 TRANSFAC yes 49599416
chr20 4090312 4090318 TCF4 TRANSFAC yes 113941597
chr20 4090330 4090341 USF2 JASPAR yes 49599417
chr20 4090330 4090341 USF2 JASPAR yes 113941598
chr20 4090368 4090373 USF2 TRANSFAC yes 49599418
chr20 4090368 4090373 USF2 TRANSFAC yes 113941599
chr20 4090372 4090384 PROX1 JASPAR yes 49599419
chr20 4090372 4090384 PROX1 JASPAR yes 113941600
chr20 4090415 4090430 TFAP2C JASPAR yes 49599420
chr20 4090415 4090430 TFAP2C JASPAR yes 113941601
chr20 4090416 4090427 TFAP2A JASPAR yes 49599421
chr20 4090416 4090427 TFAP2B JASPAR yes 49599422
chr20 4090416 4090427 TFAP2C JASPAR yes 49599423
chr20 4090416 4090427 TFAP2A JASPAR yes 113941602
chr20 4090416 4090427 TFAP2B JASPAR yes 113941603
chr20 4090416 4090427 TFAP2C JASPAR yes 113941604
chr20 4090417 4090426 TFAP2A JASPAR yes 49599424
chr20 4090417 4090426 TFAP2A JASPAR yes 113941605
chr20 4090425 4090434 THAP1 JASPAR yes 49599425
chr20 4090425 4090434 THAP1 JASPAR yes 113941606
chr20 4090430 4090446 RFX4 JASPAR yes 49599426
chr20 4090430 4090446 RFX4 JASPAR yes 113941607
chr20 4090432 4090435 MYB TRANSFAC yes 49599427
chr20 4090432 4090435 MYB TRANSFAC yes 113941608
chr20 4090437 4090451 TLX1 JASPAR yes 49599428
chr20 4090437 4090451 TLX1 JASPAR yes 113941609
chr20 4090438 4090452 TLX1 JASPAR yes 49599429
chr20 4090438 4090452 TLX1 JASPAR yes 113941610
chr20 4090445 4090451 NFIC JASPAR yes 49599430
chr20 4090445 4090451 NFIC JASPAR yes 113941611
chr20 4090451 4090455 LFA1 TRANSFAC yes 49599431
chr20 4090451 4090455 LFA1 TRANSFAC yes 113941612
chr20 4090451 4090466 AR JASPAR yes 49599432
chr20 4090451 4090466 AR JASPAR yes 113941613
SNP sites on vista35771[chr20:4090299-4090467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista35771[chr20:4090299-4090467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr20 3907956 3996229 - RNF24 ENSG00000101236.12 3996229 0.75 0.99 18255 5930
chr20 4050799 4055812 - RP11-352D3.2 ENSG00000205300.3 4055812 1.0 0.99 18256 65513
chr20 4101627 4168394 + SMOX ENSG00000088826.13 4101627 0.73 1.0 18257 88840
Expression level of Genes
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miRNAs possibly regulated by vista35771[chr20:4090299-4090467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results