EnhancerDB
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  3. vista3579[chr1:160316870-160317108]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3579[chr1:160316870-160317108]
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Tissue distribution of vista3579
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Transcription factor that possibly regulate vista3579[chr1:160316870-160317108]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160316706 160317022 EBF1 UCSC Txn Factor no Conserved 107839288
chr1 160316830 160317083 SPI1 UCSC Txn Factor no Conserved 107839296
chr1 160316871 160316886 MEF2C JASPAR yes 118383382
chr1 160316914 160316924 MAX JASPAR yes 118383383
chr1 160316914 160316925 USF1 JASPAR yes 118383384
chr1 160316914 160316925 USF2 JASPAR yes 118383385
chr1 160316914 160316926 HES5 JASPAR yes 118383386
chr1 160316914 160316926 HES7 JASPAR yes 118383387
chr1 160316915 160316925 BHLHE40 JASPAR yes 118383388
chr1 160316915 160316925 HEY1 JASPAR yes 118383389
chr1 160316915 160316925 HEY2 JASPAR yes 118383390
chr1 160316915 160316925 MAX JASPAR yes 118383391
chr1 160316915 160316925 MLX JASPAR yes 118383392
chr1 160316915 160316925 MNT JASPAR yes 118383393
chr1 160316915 160316925 TFE3 JASPAR yes 118383394
chr1 160316915 160316925 TFEB JASPAR yes 118383395
chr1 160316916 160316923 USF1 JASPAR yes 118383396
chr1 160316917 160316922 MYC TRANSFAC yes 118383397
chr1 160316917 160316922 USF1 TRANSFAC yes 118383398
chr1 160316917 160316922 USF2 TRANSFAC yes 118383399
chr1 160316930 160316951 ZNF263 JASPAR yes 118383400
chr1 160316934 160316949 ZIC3 JASPAR yes 118383401
chr1 160316935 160316949 ZIC1 JASPAR yes 118383402
chr1 160316952 160316970 ESR1 JASPAR yes 118383403
chr1 160316962 160316973 FLI1 JASPAR yes 118383404
chr1 160316962 160316975 ELF3 JASPAR yes 118383405
chr1 160316963 160316973 ETV6 JASPAR yes 118383406
chr1 160316963 160316974 ELF5 JASPAR yes 118383407
chr1 160316963 160316975 EHF JASPAR yes 118383408
chr1 160316963 160316975 ELF1 JASPAR yes 118383409
chr1 160316963 160316975 ELF4 JASPAR yes 118383410
chr1 160316963 160316976 ELF1 JASPAR yes 118383411
chr1 160316963 160316977 SPI1 JASPAR yes 118383412
chr1 160316963 160316977 SPIC JASPAR yes 118383413
chr1 160316964 160316971 SPI1 JASPAR yes 118383414
chr1 160316964 160316972 EHF JASPAR yes 118383415
chr1 160316967 160316977 POU6F2 JASPAR yes 118383416
chr1 160316968 160316978 GSX1 JASPAR yes 118383417
chr1 160316968 160316978 NOTO JASPAR yes 118383418
chr1 160316969 160316977 NKX6-1 JASPAR yes 118383419
chr1 160316969 160316977 NKX6-2 JASPAR yes 118383420
chr1 160316971 160316975 YY1 TRANSFAC yes 118383421
chr1 160316985 160316990 ETS2 TRANSFAC yes 118383422
chr1 160317002 160317006 YY1 TRANSFAC yes 118383423
chr1 160317015 160317029 SPIC JASPAR yes 118383424
chr1 160317028 160317032 NFE TRANSFAC yes 118383425
chr1 160317031 160317051 TP53 JASPAR yes 118383426
chr1 160317048 160317053 SP1 TRANSFAC yes 118383427
chr1 160317055 160317065 HOXB13 JASPAR yes 118383428
chr1 160317055 160317065 HOXD13 JASPAR yes 118383429
chr1 160317055 160317066 HOXA10 JASPAR yes 118383430
chr1 160317056 160317066 ALX3 JASPAR yes 118383431
chr1 160317056 160317066 EMX2 JASPAR yes 118383432
chr1 160317056 160317066 ESX1 JASPAR yes 118383433
chr1 160317056 160317066 GBX2 JASPAR yes 118383434
chr1 160317056 160317066 GSX1 JASPAR yes 118383435
chr1 160317056 160317066 GSX2 JASPAR yes 118383436
chr1 160317056 160317066 HESX1 JASPAR yes 118383437
chr1 160317056 160317066 HOXB2 JASPAR yes 118383438
chr1 160317056 160317066 HOXB3 JASPAR yes 118383439
chr1 160317056 160317066 LBX2 JASPAR yes 118383440
chr1 160317056 160317066 LHX2 JASPAR yes 118383441
chr1 160317056 160317066 LHX6 JASPAR yes 118383442
chr1 160317056 160317066 MEOX1 JASPAR yes 118383443
chr1 160317056 160317066 MEOX2 JASPAR yes 118383444
chr1 160317056 160317066 MIXL1 JASPAR yes 118383445
chr1 160317056 160317066 MNX1 JASPAR yes 118383446
chr1 160317056 160317066 NOTO JASPAR yes 118383447
chr1 160317056 160317066 POU6F1 JASPAR yes 118383448
chr1 160317056 160317066 RAX JASPAR yes 118383449
chr1 160317057 160317065 BSX JASPAR yes 118383450
chr1 160317057 160317065 DLX6 JASPAR yes 118383451
chr1 160317057 160317065 EN1 JASPAR yes 118383452
chr1 160317057 160317065 ISX JASPAR yes 118383453
chr1 160317057 160317065 LBX1 JASPAR yes 118383454
chr1 160317057 160317065 LHX9 JASPAR yes 118383455
chr1 160317057 160317065 LMX1A JASPAR yes 118383456
chr1 160317057 160317065 LMX1B JASPAR yes 118383457
chr1 160317057 160317065 NKX6-1 JASPAR yes 118383458
chr1 160317057 160317065 NKX6-2 JASPAR yes 118383459
chr1 160317057 160317065 PAX4 JASPAR yes 118383460
chr1 160317057 160317065 PDX1 JASPAR yes 118383461
chr1 160317057 160317065 PRRX1 JASPAR yes 118383462
chr1 160317057 160317065 RAX2 JASPAR yes 118383463
chr1 160317057 160317065 SHOX JASPAR yes 118383464
chr1 160317057 160317065 UNCX JASPAR yes 118383465
chr1 160317057 160317065 VAX1 JASPAR yes 118383466
chr1 160317057 160317065 VAX2 JASPAR yes 118383467
chr1 160317057 160317065 VSX1 JASPAR yes 118383468
chr1 160317057 160317065 VSX2 JASPAR yes 118383469
chr1 160317059 160317067 HOXA5 JASPAR yes 118383470
chr1 160317071 160317074 MYB TRANSFAC yes 118383471
chr1 160317091 160317106 IRF9 JASPAR yes 118383472
SNP sites on vista3579[chr1:160316870-160317108]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160316947 rs111262912 G A
EBF1 SPI1 ZIC1 ZIC3 ZNF263
664605
chr1 160317021 rs6668576 C A,T
EBF1 SPI1 SPIC
664606
Genes possibly regulated by vista3579[chr1:160316870-160317108]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160185505 160254920 - DCAF8 ENSG00000132716.14 160254920 0.71 0.99 1448 38050
chr1 160187254 160254920 - DCAF8 ENSG00000258465.2 160254920 0.91 0.88 1449 38050
chr1 160246602 160256138 - PEX19 ENSG00000162735.14 160256138 0.62 0.99 1450 39268
chr1 160259063 160313190 - COPA ENSG00000122218.10 160313190 0.59 1.0 1451 96320
chr1 160313062 160328742 + NCSTN ENSG00000162736.11 160313062 0.7 1.0 1452 96192
chr1 160336857 160342638 + NHLH1 ENSG00000171786.5 160336857 0.88 1.0 1453 80251
chr1 160370376 160398468 + VANGL2 ENSG00000162738.5 160370376 0.76 0.99 1454 46732
Expression level of Genes
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miRNAs possibly regulated by vista3579[chr1:160316870-160317108]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results