EnhancerDB
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  3. vista3588[chr1:160407857-160407975]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3588[chr1:160407857-160407975]
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Tissue distribution of vista3588
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Transcription factor that possibly regulate vista3588[chr1:160407857-160407975]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160407673 160408038 IRF1 UCSC Txn Factor no Conserved 107839515
chr1 160407864 160407882 IRF2 JASPAR yes 32515398
chr1 160407864 160407882 IRF2 JASPAR yes 118383856
chr1 160407865 160407886 IRF1 JASPAR yes 32515399
chr1 160407865 160407886 IRF1 JASPAR yes 118383857
chr1 160407867 160407882 STAT2 JASPAR yes 32515400
chr1 160407867 160407882 STAT2 JASPAR yes 118383858
chr1 160407868 160407882 STAT1 JASPAR yes 32515401
chr1 160407868 160407882 STAT1 JASPAR yes 118383859
chr1 160407869 160407881 IRF1 JASPAR yes 32515402
chr1 160407869 160407881 IRF1 JASPAR yes 118383860
chr1 160407869 160407883 IRF7 JASPAR yes 32515403
chr1 160407869 160407883 IRF8 JASPAR yes 32515404
chr1 160407869 160407883 IRF7 JASPAR yes 118383861
chr1 160407869 160407883 IRF8 JASPAR yes 118383862
chr1 160407869 160407884 IRF9 JASPAR yes 32515405
chr1 160407869 160407884 IRF9 JASPAR yes 118383863
chr1 160407903 160407917 FOXF2 JASPAR yes 32515406
chr1 160407903 160407917 FOXF2 JASPAR yes 118383864
chr1 160407903 160407918 FOXP1 JASPAR yes 32515407
chr1 160407903 160407918 FOXP1 JASPAR yes 118383865
chr1 160407905 160407917 FOXC2 JASPAR yes 32515408
chr1 160407905 160407917 FOXC2 JASPAR yes 118383866
chr1 160407906 160407917 FOXP2 JASPAR yes 32515409
chr1 160407906 160407917 FOXP2 JASPAR yes 118383867
chr1 160407908 160407915 FOXD2 JASPAR yes 32515410
chr1 160407908 160407915 FOXI1 JASPAR yes 32515411
chr1 160407908 160407915 FOXL1 JASPAR yes 32515412
chr1 160407908 160407915 FOXO4 JASPAR yes 32515413
chr1 160407908 160407915 FOXO6 JASPAR yes 32515414
chr1 160407908 160407915 FOXP3 JASPAR yes 32515415
chr1 160407908 160407915 FOXD2 JASPAR yes 118383868
chr1 160407908 160407915 FOXI1 JASPAR yes 118383869
chr1 160407908 160407915 FOXL1 JASPAR yes 118383870
chr1 160407908 160407915 FOXO4 JASPAR yes 118383871
chr1 160407908 160407915 FOXO6 JASPAR yes 118383872
chr1 160407908 160407915 FOXP3 JASPAR yes 118383873
chr1 160407908 160407916 FOXD1 JASPAR yes 32515416
chr1 160407908 160407916 FOXG1 JASPAR yes 32515417
chr1 160407908 160407916 FOXO3 JASPAR yes 32515418
chr1 160407908 160407916 FOXD1 JASPAR yes 118383874
chr1 160407908 160407916 FOXG1 JASPAR yes 118383875
chr1 160407908 160407916 FOXO3 JASPAR yes 118383876
chr1 160407908 160407917 SRY JASPAR yes 32515419
chr1 160407908 160407917 SRY JASPAR yes 118383877
chr1 160407918 160407933 RUNX2 JASPAR yes 32515420
chr1 160407918 160407933 RUNX2 JASPAR yes 118383878
chr1 160407922 160407932 RUNX3 JASPAR yes 32515421
chr1 160407922 160407932 RUNX3 JASPAR yes 118383879
chr1 160407923 160407932 RUNX2 JASPAR yes 32515422
chr1 160407923 160407932 RUNX2 JASPAR yes 118383880
chr1 160407932 160407944 FOXI1 JASPAR yes 32515423
chr1 160407932 160407944 FOXI1 JASPAR yes 118383881
chr1 160407945 160407950 GATA2 JASPAR yes 32515424
chr1 160407945 160407950 GATA2 JASPAR yes 118383882
chr1 160407961 160407971 BARHL2 JASPAR yes 32515425
chr1 160407961 160407971 BARHL2 JASPAR yes 118383883
chr1 160407963 160407967 YY1 TRANSFAC yes 32515426
chr1 160407963 160407967 YY1 TRANSFAC yes 118383884
chr1 160407967 160407971 YY1 TRANSFAC yes 32515427
chr1 160407967 160407971 YY1 TRANSFAC yes 118383885
SNP sites on vista3588[chr1:160407857-160407975]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160407865 rs547600753 C T
IRF1 IRF2
665048
chr1 160407924 rs73012432 T C
IRF1 RUNX2 RUNX3
665049
Genes possibly regulated by vista3588[chr1:160407857-160407975]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160259063 160313190 - COPA ENSG00000122218.10 160313190 0.59 1.0 1451 5333
chr1 160313062 160328742 + NCSTN ENSG00000162736.11 160313062 0.7 1.0 1452 5205
chr1 160336857 160342638 + NHLH1 ENSG00000171786.5 160336857 0.88 1.0 1453 29000
chr1 160370376 160398468 + VANGL2 ENSG00000162738.5 160370376 0.76 0.99 1454 62519
chr1 160454820 160493052 - SLAMF6 ENSG00000162739.9 160493052 0.93 0.95 1455 14923
Expression level of Genes
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miRNAs possibly regulated by vista3588[chr1:160407857-160407975]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results