EnhancerDB
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  3. vista3589[chr1:160420742-160421140]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3589[chr1:160420742-160421140]
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Tissue distribution of vista3589
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Transcription factor that possibly regulate vista3589[chr1:160420742-160421140]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 160420736 160420746 SP1 JASPAR yes 32516075
chr1 160420736 160420746 SP1 JASPAR yes 118383886
chr1 160420764 160420779 MEF2A JASPAR yes 32516076
chr1 160420764 160420779 MEF2A JASPAR yes 118383887
chr1 160420765 160420780 MEF2C JASPAR yes 32516077
chr1 160420765 160420780 MEF2C JASPAR yes 118383888
chr1 160420766 160420778 MEF2A JASPAR yes 32516078
chr1 160420766 160420778 MEF2B JASPAR yes 32516079
chr1 160420766 160420778 MEF2D JASPAR yes 32516080
chr1 160420766 160420778 MEF2A JASPAR yes 118383889
chr1 160420766 160420778 MEF2B JASPAR yes 118383890
chr1 160420766 160420778 MEF2D JASPAR yes 118383891
chr1 160420767 160420777 MEF2A JASPAR yes 32516081
chr1 160420767 160420777 MEF2A JASPAR yes 118383892
chr1 160420768 160420772 YY1 TRANSFAC yes 32516082
chr1 160420768 160420772 YY1 TRANSFAC yes 118383893
chr1 160420781 160420790 SOX9 JASPAR yes 32516083
chr1 160420781 160420790 SOX9 JASPAR yes 118383894
chr1 160420782 160420797 FOXP1 JASPAR yes 32516084
chr1 160420782 160420797 FOXP1 JASPAR yes 118383895
chr1 160420783 160420792 SRY JASPAR yes 32516085
chr1 160420783 160420792 SRY JASPAR yes 118383896
chr1 160420783 160420794 FOXP2 JASPAR yes 32516086
chr1 160420783 160420794 FOXP2 JASPAR yes 118383897
chr1 160420783 160420795 FOXC2 JASPAR yes 32516087
chr1 160420783 160420795 FOXC2 JASPAR yes 118383898
chr1 160420785 160420793 FOXO3 JASPAR yes 32516088
chr1 160420785 160420793 FOXO3 JASPAR yes 118383899
chr1 160420808 160420812 NFE TRANSFAC yes 32516089
chr1 160420808 160420812 NFE TRANSFAC yes 118383900
chr1 160420808 160420813 GATA1 TRANSFAC yes 32516090
chr1 160420808 160420813 GATA1 TRANSFAC yes 118383901
chr1 160420808 160420814 GATA3 JASPAR yes 32516091
chr1 160420808 160420814 GATA3 JASPAR yes 118383902
chr1 160420812 160420818 LEF1 TRANSFAC yes 32516092
chr1 160420812 160420818 SOX10 JASPAR yes 32516093
chr1 160420812 160420818 LEF1 TRANSFAC yes 118383903
chr1 160420812 160420818 SOX10 JASPAR yes 118383904
chr1 160420815 160420827 TEF JASPAR yes 32516094
chr1 160420815 160420827 TEF JASPAR yes 118383905
chr1 160420818 160420829 DMRT3 JASPAR yes 32516095
chr1 160420818 160420829 DMRT3 JASPAR yes 118383906
chr1 160420829 160420835 ETS1 JASPAR yes 32516096
chr1 160420829 160420835 ETS1 JASPAR yes 118383907
chr1 160420839 160420849 NFATC3 JASPAR yes 32516097
chr1 160420839 160420849 NFATC3 JASPAR yes 118383908
chr1 160420840 160420847 NFATC2 JASPAR yes 32516098
chr1 160420840 160420847 NFATC2 JASPAR yes 118383909
chr1 160420855 160420871 SOX8 JASPAR yes 32516099
chr1 160420855 160420871 SOX8 JASPAR yes 118383910
chr1 160420859 160420863 NFE TRANSFAC yes 32516100
chr1 160420859 160420863 NFE TRANSFAC yes 118383911
chr1 160420880 160420889 SOX9 JASPAR yes 32516101
chr1 160420880 160420889 SOX9 JASPAR yes 118383912
chr1 160420884 160420899 HNF1A JASPAR yes 32516102
chr1 160420884 160420899 HNF1A JASPAR yes 118383913
chr1 160420885 160420898 HNF1B JASPAR yes 32516103
chr1 160420885 160420898 HNF1B JASPAR yes 118383914
chr1 160420886 160420898 HNF1B JASPAR yes 32516104
chr1 160420886 160420898 HNF1B JASPAR yes 118383915
chr1 160420889 160420902 DUXA JASPAR yes 32516105
chr1 160420889 160420902 DUXA JASPAR yes 118383916
chr1 160420890 160420901 DUX4 JASPAR yes 32516106
chr1 160420890 160420901 DUX4 JASPAR yes 118383917
chr1 160420894 160420897 MYB TRANSFAC yes 32516107
chr1 160420894 160420897 MYB TRANSFAC yes 118383918
chr1 160420894 160420909 AR JASPAR yes 32516108
chr1 160420894 160420909 AR JASPAR yes 118383919
chr1 160420924 160420928 YY1 TRANSFAC yes 32516109
chr1 160420924 160420928 YY1 TRANSFAC yes 118383920
chr1 160420929 160420944 RUNX2 JASPAR yes 32516110
chr1 160420929 160420944 RUNX2 JASPAR yes 118383921
chr1 160420932 160420943 RUNX1 JASPAR yes 32516111
chr1 160420932 160420943 RUNX1 JASPAR yes 118383922
chr1 160420933 160420943 RUNX3 JASPAR yes 32516112
chr1 160420933 160420943 RUNX3 JASPAR yes 118383923
chr1 160420941 160420945 YY1 TRANSFAC yes 32516113
chr1 160420941 160420945 YY1 TRANSFAC yes 118383924
chr1 160420944 160420957 ZBTB18 JASPAR yes 32516114
chr1 160420944 160420957 ZBTB18 JASPAR yes 118383925
chr1 160420958 160420973 FOXP1 JASPAR yes 32516115
chr1 160420958 160420973 FOXP1 JASPAR yes 118383926
chr1 160420961 160420972 FOXP2 JASPAR yes 32516116
chr1 160420961 160420972 FOXP2 JASPAR yes 118383927
chr1 160420962 160420970 FOXO3 JASPAR yes 32516117
chr1 160420962 160420970 FOXO3 JASPAR yes 118383928
chr1 160420990 160420996 MYC TRANSFAC yes 32516118
chr1 160420990 160420996 MYC TRANSFAC yes 118383929
chr1 160420995 160420998 MYB TRANSFAC yes 32516119
chr1 160420995 160420998 MYB TRANSFAC yes 118383930
chr1 160420995 160421008 ELF3 JASPAR yes 32516120
chr1 160420995 160421008 ELF3 JASPAR yes 118383931
chr1 160420996 160421007 ELF5 JASPAR yes 32516121
chr1 160420996 160421007 ELF5 JASPAR yes 118383932
chr1 160420997 160421004 SPI1 JASPAR yes 32516122
chr1 160420997 160421004 SPI1 JASPAR yes 118383933
chr1 160420997 160421005 FEV JASPAR yes 32516123
chr1 160420997 160421005 FEV JASPAR yes 118383934
chr1 160420999 160421004 ETS2 TRANSFAC yes 32516124
chr1 160420999 160421004 ETS2 TRANSFAC yes 118383935
chr1 160421009 160421012 MYB TRANSFAC yes 32516125
chr1 160421009 160421012 MYB TRANSFAC yes 118383936
chr1 160421062 160421068 MZF1 JASPAR yes 32516126
chr1 160421062 160421068 MZF1 JASPAR yes 118383937
chr1 160421072 160421086 TLX1 JASPAR yes 32516127
chr1 160421072 160421086 TLX1 JASPAR yes 118383938
chr1 160421086 160421098 POU2F1 JASPAR yes 32516128
chr1 160421086 160421098 POU2F1 JASPAR yes 118383939
chr1 160421086 160421099 POU3F3 JASPAR yes 32516129
chr1 160421086 160421099 POU3F3 JASPAR yes 118383940
chr1 160421086 160421100 POU1F1 JASPAR yes 32516130
chr1 160421086 160421100 POU1F1 JASPAR yes 118383941
chr1 160421087 160421099 POU3F1 JASPAR yes 32516131
chr1 160421087 160421099 POU3F2 JASPAR yes 32516132
chr1 160421087 160421099 POU3F1 JASPAR yes 118383942
chr1 160421087 160421099 POU3F2 JASPAR yes 118383943
chr1 160421087 160421100 POU2F2 JASPAR yes 32516133
chr1 160421087 160421100 POU2F2 JASPAR yes 118383944
chr1 160421088 160421097 POU3F4 JASPAR yes 32516134
chr1 160421088 160421097 POU5F1B JASPAR yes 32516135
chr1 160421088 160421097 POU3F4 JASPAR yes 118383945
chr1 160421088 160421097 POU5F1B JASPAR yes 118383946
chr1 160421089 160421096 POU2F1 TRANSFAC yes 32516136
chr1 160421089 160421096 POU2F2 TRANSFAC yes 32516137
chr1 160421089 160421096 POU2F1 TRANSFAC yes 118383947
chr1 160421089 160421096 POU2F2 TRANSFAC yes 118383948
chr1 160421114 160421117 MYB TRANSFAC yes 32516138
chr1 160421114 160421117 MYB TRANSFAC yes 118383949
chr1 160421122 160421136 POU4F1 JASPAR yes 32516139
chr1 160421122 160421136 POU4F1 JASPAR yes 118383950
SNP sites on vista3589[chr1:160420742-160421140]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 160420748 rs146340744 T C no 665107
chr1 160420764 rs1618703 T G
MEF2A
665108
chr1 160420802 rs12076714 C T no 665109
chr1 160420849 rs139316995 T C
NFATC3
665110
chr1 160420875 rs12062589 T A no 665111
chr1 160420926 rs541409387 A T
YY1
665112
chr1 160420929 rs12062598 T G
RUNX2
665113
chr1 160420958 rs545892942 T C,G
FOXP1
665114
chr1 160421038 rs12076807 C T no 665115
Genes possibly regulated by vista3589[chr1:160420742-160421140]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 160336857 160342638 + NHLH1 ENSG00000171786.5 160336857 0.88 1.0 1453 16115
chr1 160370376 160398468 + VANGL2 ENSG00000162738.5 160370376 0.76 0.99 1454 49634
chr1 160454820 160493052 - SLAMF6 ENSG00000162739.9 160493052 0.93 0.95 1455 28088
Expression level of Genes
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miRNAs possibly regulated by vista3589[chr1:160420742-160421140]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results